spout1 (spout1)


Basic Information

Item Value
gene id spout1
gene name spout1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15770905 ~ 15775789 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601895.2
tattatgcgAACCGGAAGTGTCCGTTTCTGTTTTCACGTGTTGGTTGCAGGGAAAGATGACGGACAGCGTTGCATCGAAAAAGCCCAAATTGTCCTCTTCTCAGGGCGAGGACAGAGTAGATTGGAAGAAATGGAAAGCGGAACGAAAAGAGATCAAGAAGCAAATCAAAGAATCCAAGCTGATTCAACAACTTGACAAGCAGaagcaagaggaggaggagaagactgAGGCAGCACTGCAGCAGAGTCAGAGGGAAAACCGATCAGGACGGTCGTACACAGTGAGCGTGGCCTTGCCTGGTTCTGTCCTGGACAATGCCCAGTCTACAGAACTCCGCACATACCTGGCTGGACAGATAGCCAGAGCCTGCGTCGTGTTCTGTGTCGACGAGATCATCGTATTTGACGAACAAGATGAGGATGTCAAGACTGTTGAGGGAGAATTCAATGGTGTCGGCAAGAAGGGTCAAGCCTGCATTCAACTGGCTAGAATCCTCCAGTTCTTGGAATGCCCACAGTACCTGCGCAAATCATTCTTCCCAATGCATAAAGATTTACAGTATGCCGGCTTGCTCAACCCTCTGGACAGCCCTCACCACATGAGGAAGGATGATGAGTGTGAGTACCGGGAGGGGGTGGTCCTCGATCGGCCTAGCAAACCAGGAAAAGGCTCCTTGGTCAACTGTGGAATGTGGAAGGAGGTGCAGATAGATAAGCAGCTACAGTCTGGTCTCAGAGTCACTGTCCACATGAACAAGATCCAGAATAAAGaTGGTAGACTACACAAAGGGGTGGTGGTGGCGCCTCACAAGCCGCGAACAGAGGGAGGTCTGTACTGGGGCTACAGTGTTCGCCTGGCCTCAAGTCTAAGTAATGTGTTCACCGAGTGTCCACATAAAGAGGGCTATGATCTGACCATTGGAACATCTGAGAAAGGCAGTGATGTTGACAAAACTTCTCTTTCTCCATTCAAGCACATGTTGGTTGTGTTTGGTGGTCTGCAGGGCTTGGAGGCCAGTGTGGATGCTGATCAGAACCTGGAGGTGGCGGACCCCGGTGTCCTATTTGACCTGTACCTCAACACCTGCCCCAACCAGGGCAGCAGAACCATCCGCACAGAGGAGGCCATcctgatctccatgtccagcctgAGGCAGAAAATCACAGCCGCATTTCCAGACAAGTCGAACGGTTCATAACAGGAAGTGGCTACTGACAAACCATCACTAAGAGGAAGACTAAAGGATCTAAAAATAATTCACTTTTTTGGGGAACTGGGTGAAGCTAACTGACCCAGGAGTCGATTTAATATTTAAATACTTCTGGGTTCGAATGAATGGACATTGCTGGGATTATTCtgtgctgttttttttattttttcaagagTAAGAGATCACAGCACAAGTGAAGAAGAACCTAGTGTCTTGGCCATGAGACCTCATTCTGGGTGTTTCCTTATTTATATCCTCTCTCTTTGGTAGCATTTTGCTAGTTAAAGCTAACGCTAGCTTTGCTCTGTTTCTACTATCCCCTCTGTATAGGATTCCAGGTGAATTAAGTCATTTATATGCATCAGTTTATGTAATTTGTTCTCAAGACGCATTACAGAACATACATGAAGAGAAGTTGCTGAACACAATGCTAACAATAAATAATGCAATACATTCTGTTCAGTGATGCTAATGAATACCGCAATACATTAATTAGAATTATTCAAACTCAGACCGCTGCATGCCTCAAGATGTCAGAGGTAAAGGGTCAAGCATGATGACGAGGCAACGTTCGTCCATGTCGTGGTTAGACAGGATAAAACTACTTGGTATTTAATACAGCACATTTGTGTGAATGCCTTACAGAAGCTCACACACCCCTACATTCAACAGGCATGGTGTGAATCCATGGGCTTGGCACGAGCCAACCTACAGCGCTATAAATGTAAGCTTGTGTTCTGATGTTGGTATGTTAACACTGAGCCATAAAAGGTTAGATTGGATACGGTAATGCTACAAACAACATGTCACTTAACTTTAGCCATACTGTCTGTAAGCATATAAAGGTCTCATGAATTCCTTTAAAGCGTTGAAACAAGTGTACTCCCACTGTTTCACTAAGggatggagaaatgtaaccactcattcatagagctatggatgcaaggactgaacaCGATATAAAAATGGTAGTTTTTGCTTTGAGGTTATACAGTATTTGTTTATATTTTCAGTTCTGATGGGGTAAGAAAGTTCAacaaagctcatgaggcatttaagtTATATTCCTCAAGTTAAAAAAATGATGTAGCtactgcagatttcccctttaaaactTCTTGAATAATACAATCTTCCCTCAATTCGTAAAGTTGACATTATCTTATGTGAGTGCTTTTGAGGACATTTAACAAAAGCATTATCAACatgtaaaaatacatatttaaatgTCAATTAATTTGTTTATTTACAATAAATATTTTTGCAGTTGC

Function

symbol description
spout1 Predicted to enable miRNA binding activity. Predicted to be involved in maintenance of centrosome location and production of miRNAs involved in gene silencing by miRNA. Predicted to be active in kinetochore; mitotic spindle; and spindle pole centrosome. Is expressed in several structures, including blood; central nervous system; neural tube; optic vesicle; and tail bud. Orthologous to human SPOUT1 (SPOUT domain containing methyltransferase 1).

NR:

description
putative methyltransferase C9orf114 homolog isoform X1

GO: NA

KEGG:

id description
K09142 SPOUT1; methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601895.2 True 2482 mRNA 0.44 12 15770905 15775789

Neighbor

gene id symbol gene type direction distance location
miga2 miga2 coding downstream 18152 15740073 ~ 15752753 (-)
dolpp1 dolpp1 coding downstream 36036 15723789 ~ 15734869 (-)
LOC110523302 NA coding downstream 63298 15693396 ~ 15707607 (-)
setx LOC106569805 coding downstream 91326 15610346 ~ 15679579 (-)
rapgef1b LOC106569917 coding downstream 545573 15149438 ~ 15225332 (-)
kyat1 LOC106569847 coding upstream 120 15775909 ~ 15786131 (-)
surf6 surf6 coding upstream 10679 15786468 ~ 15788812 (-)
rpl7a rpl7a coding upstream 15722 15791511 ~ 15795413 (-)
LOC118964749 NA coding upstream 17855 15793644 ~ 15793713 (-)
LOC118964748 NA coding upstream 18238 15794027 ~ 15794103 (-)
G372015 NA non-coding downstream 84794 15685898 ~ 15686111 (-)
G371956 NA non-coding downstream 163272 15598237 ~ 15607633 (-)
G371954 NA non-coding downstream 163738 15603974 ~ 15607167 (-)
G371994 NA non-coding downstream 175621 15593717 ~ 15595284 (-)
G372054 NA non-coding upstream 41051 15816840 ~ 15817633 (-)
G372056 NA non-coding upstream 43195 15818984 ~ 15819222 (-)
G372058 NA non-coding upstream 45896 15821685 ~ 15821906 (-)
G372059 NA non-coding upstream 46669 15822458 ~ 15822944 (-)
G372060 NA non-coding upstream 47512 15823301 ~ 15823630 (-)
G371294 LOC106569911 other downstream 646116 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 775746 14988147 ~ 14995197 (-)
G370635 NA other downstream 1342314 14427338 ~ 14428591 (-)
G370333 NA other downstream 1562200 14207190 ~ 14208705 (-)
G372122 NA other upstream 199817 15975606 ~ 15976116 (-)
G372123 NA other upstream 202713 15978502 ~ 15981215 (-)
LOC110523341 LOC106569324 other upstream 1158446 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1348248 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1713237 17483696 ~ 17521507 (-)

Expression


Co-expression Network