Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964748 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 15794027 ~ 15794103 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051941.1 | True | 77 | mRNA | 0.36 | 1 | 15794027 | 15794103 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964749 | NA | coding | downstream | 314 | 15793644 ~ 15793713 (-) |
| surf6 | surf6 | coding | downstream | 5215 | 15786468 ~ 15788812 (-) |
| kyat1 | LOC106569847 | coding | downstream | 7896 | 15775909 ~ 15786131 (-) |
| spout1 | spout1 | coding | downstream | 18238 | 15770905 ~ 15775789 (-) |
| miga2 | miga2 | coding | downstream | 41274 | 15740073 ~ 15752753 (-) |
| LOC118964747 | NA | coding | upstream | 241 | 15794344 ~ 15794415 (-) |
| LOC118964756 | NA | coding | upstream | 636 | 15794739 ~ 15794807 (-) |
| LOC118964755 | NA | coding | upstream | 1038 | 15795141 ~ 15795209 (-) |
| LOC118964750 | NA | coding | upstream | 1360 | 15795463 ~ 15795537 (-) |
| c5h9orf78 | cssa01h9orf78 | coding | upstream | 16475 | 15810578 ~ 15814802 (-) |
| LOC110523302 | NA | non-coding | downstream | 86500 | 15693396 ~ 15707607 (-) |
| G372015 | NA | non-coding | downstream | 107916 | 15685898 ~ 15686111 (-) |
| G371956 | NA | non-coding | downstream | 186394 | 15598237 ~ 15607633 (-) |
| G371954 | NA | non-coding | downstream | 186860 | 15603974 ~ 15607167 (-) |
| G371994 | NA | non-coding | downstream | 198743 | 15593717 ~ 15595284 (-) |
| G372054 | NA | non-coding | upstream | 22737 | 15816840 ~ 15817633 (-) |
| G372056 | NA | non-coding | upstream | 24881 | 15818984 ~ 15819222 (-) |
| G372058 | NA | non-coding | upstream | 27582 | 15821685 ~ 15821906 (-) |
| G372059 | NA | non-coding | upstream | 28355 | 15822458 ~ 15822944 (-) |
| G372060 | NA | non-coding | upstream | 29198 | 15823301 ~ 15823630 (-) |
| G371294 | LOC106569911 | other | downstream | 669238 | 15123475 ~ 15124789 (-) |
| LOC110524957 | LOC106569957 | other | downstream | 798868 | 14988147 ~ 14995197 (-) |
| G370635 | NA | other | downstream | 1365436 | 14427338 ~ 14428591 (-) |
| G370333 | NA | other | downstream | 1585322 | 14207190 ~ 14208705 (-) |
| G372122 | NA | other | upstream | 181503 | 15975606 ~ 15976116 (-) |
| G372123 | NA | other | upstream | 184399 | 15978502 ~ 15981215 (-) |
| LOC110523341 | LOC106569324 | other | upstream | 1140132 | 16909582 ~ 16942359 (-) |
| G373228 | LOC106569424 | other | upstream | 1329934 | 17124037 ~ 17125807 (-) |
| LOC110523354 | LOC106569496 | other | upstream | 1694923 | 17483696 ~ 17521507 (-) |
