ptges (ptges)


Basic Information

Item Value
gene id ptges
gene name ptges
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15852569 ~ 15858360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601910.2
agcgagagagagaagcaccAGACCAGCCCCTCCAAAATGTGCGTCAGTGAAAGTGTTGAGTCCTGGTGCTCCATCCCGCTCCATACTTTCCAGTTAGGCTCCATGAGCACGAACAACTCTCCAACCGCAGACGTCGATAACACAGCCGTATTTCACCTGGGAATTGGAAGACCATACCAAACAATCATGTTGGAGAACGAGGCTTTTTCCTGTTTTGTTTTCTATAGTGTTCTCCTGGTCATCAAGATGTACATCATAGCAATCATCACTGGACAAGTCAGGCTTCGTAAAAAGGCTTTCGCTAACCCAGAGGATGCGCAGAGACACGGCGGCGTCCAGTACTACAGAGAGGATCCGGACGTAGAACGGTGCCGAAGAGCTCACCGTAACGACATGGAGAATATCTTCCCTTTCCTGTTCCTGGGGGCTGTGTACTCCCTGATTGGCCCGTCGCTTGCCGTGGCCCGCGCTCACTTCCTGGTCTTCTTCCTGTTCCGCATGCTCCATACAGTGGCCTACCTGTGTGTCCTGCGGGCACCCACACGCTCCCTGGCCTATGTCGTCGCCCAAGTGCCCTGCGTCTCCATGGCCGTGCAGGTCCTCGCGGCGGTGGCCTCCTCGTGGTAGTTGTGGTGTTCTGGATCTATCTGTGACCGCTTCAATCTGAGACCTATCTCAGTCTGTGAGATCAGCGGTAGAGGATACTGCAAGAGATGCTTTTCATACAAGAGAAATCCTCAAGACTATATCGCTATCAATGCTACCATAGCAGTTTGTGTCTCTCGGCTGTAAGACAGTGTGTACTCTGAAAGTGTGTACTCTGAAAGTGTGTACTCTGAAATGAAGTCAGTGTTGTGCTCTAGCAAGCACATCCTCCTGCAGTACTGTATGTTTGCTATGCAATGTTGAAGTCAATTGCCTCCCTCTTGATAGTCCAGGGGACTCAACTCTCTGAAGATAAAGGTTTTAATTAGTTAACATTGAACCTTTTAACCAGTtcattgtgttgtcatgttgtttttGTATACACAAGTTGTTGCTTGTTTCTGtcttttttattctctatttcttgttataaactgggtggtttgagctctgaatactgattggctgacagctgtgttatttttactgctctaattacgttggtaaccagtttctaatagaaataaggcacctcaggtgtTTATGGTATATTGCCAgtatatcacggctaagggctgtatccaggcactccgcgttgcgttgtgcgtaagaacagcccttagccgtggtatattggcccaataccacaccccctcgggccttattgcttaattatacttAACCCTGATTGGCTCCAGGGGTGCTGTACTacaatggctgaccctgtaaaacaatacatttcactgcacctattttATTCCACTGAGAGCTATTTTAGTACAGTCTGGGATATAATGACCTTTTATCTGAAACCAGCTTGATCCAGTCTTAGAGGTTGAACTGAAGAGCAGGCATGTGCCCTTCTAAGGAACTTTTCCAGTGTGGTGGTTCACTGTGTTCGTTTATCTAGCATTGGCCACCATGGCATCACATGATGGGGGATGATGACACAGAGACATCATGTCTACCACACCTGTCGATGGGATACTGATGAGGCCAAGAGTTTTTCCTGATCACAGGATTTGACTACATCCCATAGTTTTTCCTGGTCTGGTCCTGGACCTAGATAGGTGCTATGACTGCTGAATTGTCCATAATCATAACATATATTTTATCCTCCACCTCTGTGTTTCTTTAGCCTGGTTCTAGATCAAAATTGGCAAGGCAGGATAGGGGTTTCTTCAGTATTGTCCatgtagggtagcctagtggttagagcgttggactagtaaccggaaggttaccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttcctaggccgtcattgaaaataagaatttgttcttaactgacttgcctagttaaataaaggtaaaataaaataaataaccaaTGGGTGGTTTGTTGATGAATGGTCCTCTACTGTGTTGTGTCTTCTACACTGCAGCCGCTTGAGGCTTGCTAGAGCAGAAGTTGGCATTGTGAAACCTATGTGTGTCAACTGGGCGTCATTACTGGACAGTTATTGCACATTTCCAAGTTACTGCAACACAATTCCAAGTTACTACAACACATTTCCAAGTTACTGCAACACAATTCCAAGTTACTACAACACATTTCCAAGTTACTGCAACACAATTCCAAGTTACTACAACACATTTCCAAGTTACTGCAACACAGTTCCAAAGTCTTTGTGTTTGACctaatacaatgctatttctctgtaaataaATTAAccacagactttcagcatgcttctAGAGAAGGTcgctcaacatgtactgcactgacacaactGACTgatgagctgttcttgtctattaatgttctgtattatgtcattctgtattatgtttcatgttttgtgtggaccccaggaagagtagctgctgtttttgcaacagctaatggggatccataataaaataccaaatacccactgggcacagacgtcaattcaatgtctattccacattggttcaatgtaatttcataaaaataatatGGAAACAATGTTAATTCAAGCAGTGTATGCCTAATGGGACGCTACTGCCACACCTTTCCAAGTTACTGTTTCACTGTTCCAAGTTACTGTTTCACAGTTCCAAGTTACTGTTTCACAGTTCCAAGTTACTGTTTCACAGTTCCAAGTTACTGCTTCACAGTTCCAAGTTACTGTTTCACAGTTGCAAGTTACTGCTTCACAGTTCAAAGTTAATGCTTCACAGTTCCAAGTTACTGCATTTTTCCTAGTTACAGTTCCAAGTTACTGTATTACTTTATGTTTTACTCTGTTATTGAATGTGCATTGAAAAGAATGGGCATCTTGTAGAATGTACAAATGGATGTGtatggagtgcaatgagagagtaAAGTGAGTCCTTTAA

Function

symbol description
ptges Enables prostaglandin-E synthase activity. Acts upstream of or within cell migration involved in gastrulation. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in epidermis; pectoral fin; periderm; and splanchnocranium. Orthologous to human PTGES (prostaglandin E synthase).

NR:

description
prostaglandin E synthase-like

GO: NA

KEGG:

id description
K15729 PTGES; microsomal prostaglandin-E synthase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601910.2 True 3023 mRNA 0.44 3 15852569 15858360

Neighbor

gene id symbol gene type direction distance location
usp20 LOC106569850 coding upstream 13110 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 20828 15829533 ~ 15831741 (+)
med22 med22 coding upstream 42067 15796177 ~ 15810502 (+)
LOC110523312 surf1 coding upstream 61541 15788795 ~ 15791028 (+)
st6galnac6 sia7f coding upstream 80543 15756259 ~ 15772026 (+)
LOC110523326 dusp26 coding downstream 575903 16434263 ~ 16437732 (+)
LOC110523327 LOC105015301 coding downstream 596235 16454595 ~ 16470342 (+)
pargl LOC106569224 coding downstream 658440 16516800 ~ 16557705 (+)
LOC110523336 NA coding downstream 832545 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 853822 16712182 ~ 16726009 (+)
G371639 NA non-coding upstream 848 15851370 ~ 15851721 (+)
G371632 NA non-coding upstream 36820 15815205 ~ 15815749 (+)
G371615 LOC100194725 non-coding upstream 58945 15791559 ~ 15795122 (+)
G371612 NA non-coding upstream 137974 15714329 ~ 15714595 (+)
G371610 NA non-coding upstream 139368 15712970 ~ 15713201 (+)
G371653 NA non-coding downstream 11413 15869773 ~ 15870026 (+)
G371656 NA non-coding downstream 28878 15887238 ~ 15916078 (+)
G371661 LOC106594099 non-coding downstream 36015 15894375 ~ 15899296 (+)
G371672 NA non-coding downstream 68406 15926766 ~ 15939264 (+)
G371671 NA non-coding downstream 76948 15935308 ~ 15936996 (+)
G371182 NA other upstream 723752 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 799013 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1047098 14798616 ~ 14805526 (+)
G370414 NA other upstream 1484408 14367672 ~ 14368161 (+)
G372281 LOC106569177 other downstream 361246 16218328 ~ 16220933 (+)
G372373 NA other downstream 877282 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 1012074 16870434 ~ 16882185 (+)
G373726 NA other downstream 1845753 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 2209083 18067350 ~ 18177035 (+)

Expression


Co-expression Network