LOC110523317 (LOC106568982)


Basic Information

Item Value
gene id LOC110523317
gene name LOC106568982
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15902216 ~ 15926643 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976899.1
AGGAAACGAAACTGAtcggagtctctctgtctgtctgtctgtgtgagagtgaaCAACAACAGTCTAAATGGCTCAGCAGGGAGTTCTACTGGACCAGAAccagttctgttgttctgtctgtctggatctacTGAAGGAGCCGGTGGCTATTCCCTGTGGACACAGTTACTGTAGAAGTTGTATTGAGGGGTACTGGGATCAGGACGATCAGGGCATCTACAGTTGTCCTCAGTGCAATCAGACCTTCACTCCAAGGCCTACTCTGAGGAAAAATAACATGTTGGCTGAGGTGGTGGAGACACTGAAGAAGACAGGACTCCAGGCTGCTCCCCCTGCTCTGTGCTATGTTGGACCTGGAGATGTTGCGTGTGATTTCTGCACTGGgaccagaaagcagaaagccttcatgtcctgtctggtgtgtctggtgtcttactgtgagactcacctcCAGCCTCACTATGATGTTCCTGGACTAAAGAAACACAAGCTGGTCAAAGCCACCGCACAACTACAGGAGAAGATCTGCTCTCATCATGacaaactgctggaggtttaCTGTCGTACCGATCAACAGTGCATCTGTTATCATTGTGTGATGGATGAACATAAAGGCCATGATACAGTGtcagctgcagcagagaggactAAGATACAGAGTCAGCTGGGGATGAGTCAGCAGAatgtccaggagagagagaaggtgctgAAGGAGATCCAACAGGCTGTGGAGTCTCTTAAGtGTTCTGCAAATGCAGCAGTGGATGACAGTGAGAGGATCTTTACTGAACTGATCCGCTCCATGGAGGAAAGGCGCTCTgaggtgaaggagctgatcaGAGCTCAGGAGAAGGCTGAAGTGAGTCGTGCTGAAGGTCTACTGGAGCCACTGAAACAGGAGCTAGTTGAGCTGAGGAGGAGAGATGCTGAGCTGGAGAAACTCTCACACACAGATGATCACATCCATTTCCTTCAGagtTATCAATCTCTCTCCAGTCCCAGTGTATCTTCAGACTTGCCCAGCATCATTGTCTGTCCTCTTCAGTACTTTGGAGATGTGAATAAGTCAGTGTCTGAGCTGAGAGTGAAAGTAGAAGACCTCCTTAAAGGAGAATGGACCAAGATCTCCACTACAGggaTAGCATGTCATAACAACCACAGCTCCCAGACGAAAGCTGCTCTGCAGCAAGACGACCCCATGGAGGACAAGGACAGGGGTCAGGAGGTCAAACGCCGCGAGATCCCTGTTGGAAACTTGGTCGACGTTGACAACACTTCGGTCGCCAAATCACTGCacggagacagtgagagagaaaggggtggagaaaggaagaaagaggaagaaagacagaaacATAAGGAAATGGAAAGTGAGAAAAAGAGGGATGGCGGGAGGGAAGTTGAAATGGATGGAGcaagggtaggagagagggatggaacaactgaaagagagatggagggggtgagggaagaagCGATGGATATAGGGTGGGAAAGCAAGAGGGATGGAACAAGAGAAggagtgaggggtgaggaggagaagaggtcgTGCTGCTATCTCTCTCAGCTGAAGAAAGTCCCTGAGTGTCACAAGGAGCTGGAGCCACTGTCCTTCAGCAGAACTCACAACGTCCTCATAAATGTGAATGAGTTCCACCCAAAAATGACATTGAAACCTCATTTTGGACATCATGTGTGGCACAGTGACTTTGTTAAGATGCCCTGCTCACCAGAAAGCCTCATGAAGACTGGATGGGTAACCAGCTCTGAGCGAAGTCGGTGGGAGGTGGTCTCTAAACAGCTGGAGAGTCTGGCCAATAAGACCACTGCATCAGTGAGTGACGTAGagAAAGCCATAAAGAAATACAACCCAAAGTATGAAGATCAATGGTCCTTTGATGCCCTGCATACCTTTGTTCAGaaaTCACCCAAAGAAGAGAAATACTACACGTCTGTTTTTCCTAAGATAGCAGAGCTGGCCTCCAGCCTGCCTCACGATATCAAGAAGgctatccCTCTACTCCAGAAGGGCCAGACTCGGTCCATCACGTTGTCCCAGAGTCAGATAGCTTGTCTGCTGGCCAACGCCTTCTACTGCACCTTCCCCCACCGCAACTCTCCCAACCCCAGAGCAGAGTACCACAACTACCCCACCATCAACTTTAACAGTCTGTTTGAAAAGTGgtctgagaggaagagagagaagctgAGAGCCCTCCTTCATTACTTCCACACTGTCACAGACCCAGCGACCAGGCCATGTGGACTGGTGACCTTTGAGAGGCGCTacatcagagacagagacatgcccAACTGggggagttGTAAGGAGACTGTTCCTAAACTCCACGTCACCTCAGCAGGCTGCATAGAGGAACAGGGAGCAGGGATGTTACAGTGTGTaatggcgGACTTTGCCTGTAACATGATAGGAGGTGGAGTGTTGGGCTCAGGTCTGGTTCAAGAGGAGATTCTGTTCCTGATGAACCCTGAACTCATCGTATCTCGACTCTTCACTGAGAAACTAGGAGACAATGAGTGTCTCTTcatcacaggttctCAACAGTTCAGTCAGTACAGTGGCTACAGTGACACTTTTAAGTGGGAAGGGCCTCACAGAGACGACAttgagagGGATGAGTGGCAGAGGCTACACAGACAGATTGTGGCCATGGATGCTCTCCACTTCAGACACCAGAGAGAACAGTACAACATGAAACAGGTCACCAGGGAACTCAACAAGGCGTACTGTGGCTTTAAGGCAGATGACAACACTTACCCAGACTTCCTTCCTGACATCGCCACAGGAAACTGGGGCTGCGGAGCCTTCAATGGAGACCCCAAACTTAAAGCTCTGGTCCAGCTGATGGCTGCAGCCAGGGCTAAGAGGGGCGTGGCCTTCTTCACATTCAAGAACTTCAGCTTGGAGAGAGAGCTGCAGGACATGCACCACCTACTGGTCACACACAGAACTACAGTGGgTGAGCTGTATGAGTTGCTGGTTGACTACTGTGCTGTGATACAGTTGGCTCACACACATGCGGACCTGTTTGACTGGATCAGGAATACCCTGAAACACAGGAGTCAGCTGTGAGGACACATCTACATACTCTAAAGGAGCTTTCTTTCCTTGTCTCCATTCATTTTTTAACattattgagatgcaccccagaGATAGAGTGGCTCTATGAATGATCTGTGGATAGAAACATGGTACAGTTCCAAGTAATGGTTGATTATGAATGTGTTTGTCTTTTCAATAGTTACACTGTTCCTAAATCAAACTGATACATTTGTAACTACTGCATACTGAACTATTTAGAAAATGACTAAATGTGATGATAAAACGAAGCTAATGAAATGATGTCAACAAAATCAGGGGTCCTGCTTTTTGATTTGTCCCTTGGTGATAGCCAACAACTTCACAAAACACTGGAAACTATGCACataacaggaggttggtggcaccttcattttggagaacgggctcgtggtcaTGGCTAGAGTGGAATCAGTGgattggtatcaaatacatcaaacatatggtttctatgtgtttgatgccattccaattTCTCTTtcccggccattattatgagcagttctcctctcagcagcctgcTGTGATGCACAAGAAGTGTACTGTAAAATACTCTAGAATTcttattatttttaaatgattAATAAATTCCTCTTTATAA
>XM_036976900.1
AGGAAACGAAACTGAtcggagtctctctgtctgtctgtctgtgtgagagtgaaCAACAACAGTCTAAATGGCTCAGCAGGGAGTTCTACTGGACCAGAAccagttctgttgttctgtctgtctggatctacTGAAGGAGCCGGTGGCTATTCCCTGTGGACACAGTTACTGTAGAAGTTGTATTGAGGGGTACTGGGATCAGGACGATCAGGGCATCTACAGTTGTCCTCAGTGCAATCAGACCTTCACTCCAAGGCCTACTCTGAGGAAAAATAACATGTTGGCTGAGGTGGTGGAGACACTGAAGAAGACAGGACTCCAGGCTGCTCCCCCTGCTCTGTGCTATGTTGGACCTGGAGATGTTGCGTGTGATTTCTGCACTGGgaccagaaagcagaaagccttcatgtcctgtctggtgtgtctggtgtcttactgtgagactcacctcCAGCCTCACTATGATGTTCCTGGACTAAAGAAACACAAGCTGGTCAAAGCCACCGCACAACTACAGGAGAAGATCTGCTCTCATCATGacaaactgctggaggtttaCTGTCGTACCGATCAACAGTGCATCTGTTATCATTGTGTGATGGATGAACATAAAGGCCATGATACAGTGtcagctgcagcagagaggactAAGATACAGAGTCAGCTGGGGATGAGTCAGCAGAatgtccaggagagagagaaggtgctgAAGGAGATCCAACAGGCTGTGGAGTCTCTTAAGtGTTCTGCAAATGCAGCAGTGGATGACAGTGAGAGGATCTTTACTGAACTGATCCGCTCCATGGAGGAAAGGCGCTCTgaggtgaaggagctgatcaGAGCTCAGGAGAAGGCTGAAGTGAGTCGTGCTGAAGGTCTACTGGAGCCACTGAAACAGGAGCTAGTTGAGCTGAGGAGGAGAGATGCTGAGCTGGAGAAACTCTCACACACAGATGATCACATCCATTTCCTTCAGagtTATCAATCTCTCTCCAGTCCCAGTGTATCTTCAGACTTGCCCAGCATCATTGTCTGTCCTCTTCAGTACTTTGGAGATGTGAATAAGTCAGTGTCTGAGCTGAGAGTGAAAGTAGAAGACCTCCTTAAAGGAGAATGGACCAAGATCTCCACTACAGggaTAGCATGTCATAACAACCACAGCTCCCAGACGAAAGCTGCTCTGCAGCAAGACGACCCCATGGAGGACAAGGACAGGGGTCAGGAGGTCAAACGCCGCGAGATCCCTGTTGGAAACTTGGTCGACGTTGACAACACTTCGGTCGCCAAATCACTGCacggagacagtgagagagaaaggggtggagaaaggaagaaagaggaagaaagacagaaacATAAGGAAATGGAAAGTGAGAAAAAGAGGGATGGCGGGAGGGAAGTTGAAATGGATGGAGcaagggtaggagagagggatggaacaactgaaagagagatggagggggtgagggaagaagCGATGGATATAGGGTGGGAAAGCAAGAGGGATGGAACAAGAGAAggagtgaggggtgaggaggagaagaggtcgTGCTGCTATCTCTCTCAGCTGAAGAAAGTCCCTGAGTGTCACAAGGAGCTGGAGCCACTGTCCTTCAGCAGAACTCACAACGTCCTCATAAATGTGAATGAGTTCCACCCAAAAATGACATTGAAACCTCATTTTGGACATCATGTGTGGCACAGTGACTTTGTTAAGATGCCCTGCTCACCAGAAAGCCTCATGAAGACTGGATGGGTAACCAGCTCTGAGCGAAGTCGGTGGGAGGTGGTCTCTAAACAGCTGGAGAGTCTGGCCAATAAGACCACTGCATCAGTGAGTGACGTAGagAAAGCCATAAAGAAATACAACCCAAAGTATGAAGATCAATGGTCCTTTGATGCCCTGCATACCTTTGTTCAGaaaTCACCCAAAGAAGAGAAATACTACACGTCTGTTTTTCCTAAGATAGCAGAGCTGGCCTCCAGCCTGCCTCACGATATCAAGAAGgctatccCTCTACTCCAGAAGGGCCAGACTCGGTCCATCACGTTGTCCCAGAGTCAGATAGCTTGTCTGCTGGCCAACGCCTTCTACTGCACCTTCCCCCACCGCAACTCTCCCAACCCCAGAGCAGAGTACCACAACTACCCCACCATCAACTTTAACAGTCTGTTTGAAAAGTGgtctgagaggaagagagagaagctgAGAGCCCTCCTTCATTACTTCCACACTGTCACAGACCCAGCGACCAGGCCATGTGGACTGGTGACCTTTGAGAGGCGCTacatcagagacagagacatgcccAACTGggggagttGTAAGGAGACTGTTCCTAAACTCCACGTCACCTCAGCAGGCTGCATAGAGGAACAGGGAGCAGGGATGTTACAGgcgGACTTTGCCTGTAACATGATAGGAGGTGGAGTGTTGGGCTCAGGTCTGGTTCAAGAGGAGATTCTGTTCCTGATGAACCCTGAACTCATCGTATCTCGACTCTTCACTGAGAAACTAGGAGACAATGAGTGTCTCTTcatcacaggttctCAACAGTTCAGTCAGTACAGTGGCTACAGTGACACTTTTAAGTGGGAAGGGCCTCACAGAGACGACAttgagagGGATGAGTGGCAGAGGCTACACAGACAGATTGTGGCCATGGATGCTCTCCACTTCAGACACCAGAGAGAACAGTACAACATGAAACAGGTCACCAGGGAACTCAACAAGGCGTACTGTGGCTTTAAGGCAGATGACAACACTTACCCAGACTTCCTTCCTGACATCGCCACAGGAAACTGGGGCTGCGGAGCCTTCAATGGAGACCCCAAACTTAAAGCTCTGGTCCAGCTGATGGCTGCAGCCAGGGCTAAGAGGGGCGTGGCCTTCTTCACATTCAAGAACTTCAGCTTGGAGAGAGAGCTGCAGGACATGCACCACCTACTGGTCACACACAGAACTACAGTGGgTGAGCTGTATGAGTTGCTGGTTGACTACTGTGCTGTGATACAGTTGGCTCACACACATGCGGACCTGTTTGACTGGATCAGGAATACCCTGAAACACAGGAGTCAGCTGTGAGGACACATCTACATACTCTAAAGGAGCTTTCTTTCCTTGTCTCCATTCATTTTTTAACattattgagatgcaccccagaGATAGAGTGGCTCTATGAATGATCTGTGGATAGAAACATGGTACAGTTCCAAGTAATGGTTGATTATGAATGTGTTTGTCTTTTCAATAGTTACACTGTTCCTAAATCAAACTGATACATTTGTAACTACTGCATACTGAACTATTTAGAAAATGACTAAATGTGATGATAAAACGAAGCTAATGAAATGATGTCAACAAAATCAGGGGTCCTGCTTTTTGATTTGTCCCTTGGTGATAGCCAACAACTTCACAAAACACTGGAAACTATGCACataacaggaggttggtggcaccttcattttggagaacgggctcgtggtcaTGGCTAGAGTGGAATCAGTGgattggtatcaaatacatcaaacatatggtttctatgtgtttgatgccattccaattTCTCTTtcccggccattattatgagcagttctcctctcagcagcctgcTGTGATGCACAAGAAGTGTACTGTAAAATACTCTAGAATTcttattatttttaaatgattAATAAATTCCTCTTTATAA

Function

NR:

description
uncharacterized protein LOC110523317

GO: NA

KEGG:

id description
K07759 PARG; poly(ADP-ribose) glycohydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976899.1 False 3701 mRNA 0.48 20 15902216 15926643
XM_036976900.1 True 3692 mRNA 0.48 19 15902216 15926643

Neighbor

gene id symbol gene type direction distance location
LOC118964569 LOC106594099 coding downstream 2922 15898677 ~ 15899294 (-)
LOC118964568 LOC106568982 coding downstream 7038 15872778 ~ 15895178 (-)
c5h9orf78 cssa01h9orf78 coding downstream 87414 15810578 ~ 15814802 (-)
LOC118964750 NA coding downstream 106679 15795463 ~ 15795537 (-)
LOC118964755 NA coding downstream 107007 15795141 ~ 15795209 (-)
garnl3 LOC106562762 coding upstream 12308 15938951 ~ 16121310 (-)
LOC118964745 NA coding upstream 277047 16203690 ~ 16205002 (-)
si:dkey-34e4.1 LOC106569177 coding upstream 291671 16218314 ~ 16410253 (-)
LOC110523325 LOC106569195 coding upstream 490338 16416981 ~ 16422022 (-)
LOC110522841 LOC106569125 coding upstream 500860 16427503 ~ 16430780 (-)
G372093 NA non-coding downstream 32336 15869563 ~ 15869880 (-)
G372087 NA non-coding downstream 41738 15860270 ~ 15860478 (-)
G372085 ptges non-coding downstream 43863 15855720 ~ 15858353 (-)
G372077 NA non-coding downstream 56951 15843200 ~ 15845265 (-)
G372074 NA non-coding downstream 61085 15840903 ~ 15841131 (-)
G372113 NA non-coding upstream 13088 15939731 ~ 15940557 (-)
G372115 NA non-coding upstream 25959 15952602 ~ 15957597 (-)
G372130 NA non-coding upstream 64007 15990650 ~ 15995471 (-)
G372139 NA non-coding upstream 82645 16009288 ~ 16009780 (-)
G372148 NA non-coding upstream 93468 16020111 ~ 16059536 (-)
LOC110523302 NA other downstream 203887 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 777427 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 907057 14988147 ~ 14995197 (-)
G370635 NA other downstream 1473625 14427338 ~ 14428591 (-)
G370333 NA other downstream 1693511 14207190 ~ 14208705 (-)
G372122 NA other upstream 48963 15975606 ~ 15976116 (-)
G372123 NA other upstream 51859 15978502 ~ 15981215 (-)
LOC110523341 LOC106569324 other upstream 1007592 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1197394 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1562383 17483696 ~ 17521507 (-)

Expression


Co-expression Network