LOC110523326 (dusp26)


Basic Information

Item Value
gene id LOC110523326
gene name dusp26
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16434263 ~ 16437732 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601919.2
TTTTACATCATTTTACATCCTACTGTTGCTGTATCATGTTCAATAGGCGAGGAACATGGCGGATAGTATGGGCGCCCTGTAGTcgcgtgaggagaggagaggaggggtgacgCTCGAGAGATAGAAAGTGAAACGAGAAGGAAGAAGAAGCACACGCCCCAGATGGCGTTCATGTCCCGGTTCTCCCGGTCCCGGAGCAGCTCGAGATCTCCCAACAGGAAAGATTCGGGGCGCGGGTCCCCGGTGCTAACAGTGTCTGAGCTGGAACGGCTCCTCTACACCGGGAAAACAGCGTGTAACCATGCCGACGAGGTCTGGCCAGGGCTCTACATTGGAGACCAAGACATTGCATCAGACCGGCGTGAGCTGGCACGGCTTGGCATCACCCACATCCTGAACTGTGCCCAGAGTAAGTGGCGCGGCGGGGCGGAGTACTACGCTGGCATGGATATCACCTACCAGGGCATCGAGGCCCACGACACGCCCTCCTTCGACATGAGTGTCAACTTCTACCCCGCTGCAGAGTTCATACACAGAGCCCTCAGCAGCGGTGgTAAGGTGCTGGTGCACTGTGCGGTGGGTGTGAGTCGTTCGGCCACGCTGGTTCTGGCCTACCTGATGATCCGTCAGAACCTGACCCTGGTGGATGCCATCAAGGCAGTGAAGGACCACCGTGGCGTAATCCCCAACCGGGGCTTCCTACGCCAGCTCAACGGCCTGGACAGCATCCTCCGGgacaaccgcaaggctctacaCTCCCCAACCTCCCcaacctctccaacctctccaacctctctttAGAGCTAACAGGCTAACACAGCTAAATACACTACTTTAGAGTTGTAACAATGCTAACCCATCTACAAAACCTGGGTTAACCAGGGTAAACCATTTTTTAAACCAGAAAAATACATCAGCAACGGGTGTCATTGTCTTTCCCATGTCTTGATCTCGTCATGAAAAAGGCGTCTTTACCTGGTTGAAACAGAGACCAATTGGTCGGAATCTGGTTTTATGACATCTTCAAAACCAGAAAAACAGTTTACAACCAGAAATTGATATAATTCAAACGTCAGGCAGAATTTCTTTCCTGCTGTGTGGTCGTGTGACAATCGTTGTCTGTTTCCCTTTTTATCTTTGGATAAAAGCGCCTGGGTCTTGACTAACAATCCCAGGTATTGTGGTCAGTTATACAGTACTAACTATATGGTAGAATTAAGTATCAAAGggatataaatcatgccttataTAGACGTAACTTCAACCTATACAGTGCagtagagacatggagacattttGATGACATGTACAATCATATCATTCCCAaatggccattccaagacatttatatgtttccccttaaaccactcgagtgttgctttagcagtatgcttagtatcattgtcctgctggaaggtgaacctccgtcccagtctcaaatctctggaagactgaaacaggtttccctcaagaatttccctgtttttagcaccatccatcattccttcaattctgaccagtttcccagtccctactgataaaaaacatccccacagcatgatgctgccaccaccatggcagcatcatgctggggatggtgttctcggtgAGTGCATTACGCACTCAAGCCACCAtcagtacgcacacctgccttccccccgTAACATGCATCAGCGATCATTGGACTCACGTGGActcaattacttgtgtcattaccttccctatatctgtctgttcccaagctctgttccctgctttgGGATTAATTGTCTCATGTCCGTTTTACCCGTGTCCTgatgctgttcctgtcttgtttccTTGTCTGTTCCCAAATAAATTTCTGACTCCTCATTCCTGCTTCTCCTGTCCGGCGTCGGTCTTTACAGACcttgcgttttccttgatggacaaaaagctaaattttagtctcatctgaccagagtaccttcttccatatttttggggagtctcccacatgccttatGGCGAACAcgaaacgtgtttgcttatttttttctttaagcaatggcttttttctggccactcttttgTAAAGCTCTGTTGAGTGTACAGCTTAATGTGGTCCTGTGGACAGATAATCAGAGATAAAACACTGGACTGTGGACTTTTTAAACGAATTATGTGACTTATGAGGGTAATTGGTTGCACAATCTTATTTTGGGgcgtcatagcaaagggggtgaatacatatgcacgcacagaTTATTGCTGTGACAATACAAGTAAAATTAAAATACTACATCTGTAGCTACCTACTA
>XM_021601920.2
TTACATCCTACTGTTGCTGTATCATGTTCAATAGGCGAGGAACATGGCGGATAGTATGGGCGCCCTGTAGTcgcgtgaggagaggagaggaggggtgacgCTCGAGAGATAGAAAGTGAAACGAGAAGGAAGAAGCACACGCCCCAGATGGCGTTCATGTCCCGGTTCTCCCGGTCCCGGAGCAGCTCGAGATCTCCCAACAGGAAAGATTCGGGGCGCGGGTCCCCGGTGCTAACAGTGTCTGAGCTGGAACGGCTCCTCTACACCGGGAAAACAGCGTGTAACCATGCCGACGAGGTCTGGCCAGGGCTCTACATTGGAGACCAAGACATTGCATCAGACCGGCGTGAGCTGGCACGGCTTGGCATCACCCACATCCTGAACTGTGCCCAGAGTAAGTGGCGCGGCGGGGCGGAGTACTACGCTGGCATGGATATCACCTACCAGGGCATCGAGGCCCACGACACGCCCTCCTTCGACATGAGTGTCAACTTCTACCCCGCTGCAGAGTTCATACACAGAGCCCTCAGCAGCGGTGgTAAGGTGCTGGTGCACTGTGCGGTGGGTGTGAGTCGTTCGGCCACGCTGGTTCTGGCCTACCTGATGATCCGTCAGAACCTGACCCTGGTGGATGCCATCAAGGCAGTGAAGGACCACCGTGGCGTAATCCCCAACCGGGGCTTCCTACGCCAGCTCAACGGCCTGGACAGCATCCTCCGGgacaaccgcaaggctctacaCTCCCCAACCTCCCcaacctctccaacctctccaacctctctttAGAGCTAACAGGCTAACACAGCTAAATACACTACTTTAGAGTTGTAACAATGCTAACCCATCTACAAAACCTGGGTTAACCAGGGTAAACCATTTTTTAAACCAGAAAAATACATCAGCAACGGGTGTCATTGTCTTTCCCATGTCTTGATCTCGTCATGAAAAAGGCGTCTTTACCTGGTTGAAACAGAGACCAATTGGTCGGAATCTGGTTTTATGACATCTTCAAAACCAGAAAAACAGTTTACAACCAGAAATTGATATAATTCAAACGTCAGGCAGAATTTCTTTCCTGCTGTGTGGTCGTGTGACAATCGTTGTCTGTTTCCCTTTTTATCTTTGGATAAAAGCGCCTGGGTCTTGACTAACAATCCCAGGTATTGTGGTCAGTTATACAGTACTAACTATATGGTAGAATTAAGTATCAAAGggatataaatcatgccttataTAGACGTAACTTCAACCTATACAGTGCagtagagacatggagacattttGATGACATGTACAATCATATCATTCCCAaatggccattccaagacatttatatgtttccccttaaaccactcgagtgttgctttagcagtatgcttagtatcattgtcctgctggaaggtgaacctccgtcccagtctcaaatctctggaagactgaaacaggtttccctcaagaatttccctgtttttagcaccatccatcattccttcaattctgaccagtttcccagtccctactgataaaaaacatccccacagcatgatgctgccaccaccatggcagcatcatgctggggatggtgttctcggtgAGTGCATTACGCACTCAAGCCACCAtcagtacgcacacctgccttccccccgTAACATGCATCAGCGATCATTGGACTCACGTGGActcaattacttgtgtcattaccttccctatatctgtctgttcccaagctctgttccctgctttgGGATTAATTGTCTCATGTCCGTTTTACCCGTGTCCTgatgctgttcctgtcttgtttccTTGTCTGTTCCCAAATAAATTTCTGACTCCTCATTCCTGCTTCTCCTGTCCGGCGTCGGTCTTTACAGACcttgcgttttccttgatggacaaaaagctaaattttagtctcatctgaccagagtaccttcttccatatttttggggagtctcccacatgccttatGGCGAACAcgaaacgtgtttgcttatttttttctttaagcaatggcttttttctggccactcttttgTAAAGCTCTGTTGAGTGTACAGCTTAATGTGGTCCTGTGGACAGATAATCAGAGATAAAACACTGGACTGTGGACTTTTTAAACGAATTATGTGACTTATGAGGGTAATTGGTTGCACAATCTTATTTTGGGgcgtcatagcaaagggggtgaatacatatgcacgcacagaTTATTGCTGTGACAATACAAGTAAAATTAAAATACTACATCTGTAGCTACCTACTA

Function

symbol description
dusp26 Acts upstream of or within axonogenesis; lens development in camera-type eye; and retina layer formation. Is expressed in brain and retina.

NR:

description
dual specificity protein phosphatase 26

GO: NA

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601919.2 False 2279 mRNA 0.48 4 16434263 16437732
XM_021601920.2 True 2264 mRNA 0.48 4 16434275 16437732

Neighbor

gene id symbol gene type direction distance location
ptges ptges coding upstream 575903 15852569 ~ 15858360 (+)
usp20 LOC106569850 coding upstream 594804 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 602522 15829533 ~ 15831741 (+)
med22 med22 coding upstream 623761 15796177 ~ 15810502 (+)
LOC110523312 surf1 coding upstream 643235 15788795 ~ 15791028 (+)
LOC110523327 LOC105015301 coding downstream 16863 16454595 ~ 16470342 (+)
pargl LOC106569224 coding downstream 79068 16516800 ~ 16557705 (+)
LOC110523336 NA coding downstream 253173 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 274450 16712182 ~ 16726009 (+)
ved LOC106569620 coding downstream 294904 16732636 ~ 16735129 (+)
G372345 NA non-coding upstream 78951 16355092 ~ 16355312 (+)
G372342 NA non-coding upstream 81023 16353024 ~ 16353240 (+)
G372333 NA non-coding upstream 98710 16335185 ~ 16335553 (+)
G372331 NA non-coding upstream 102916 16331091 ~ 16331347 (+)
G372329 NA non-coding upstream 104605 16329408 ~ 16329658 (+)
G372374 NA non-coding downstream 38794 16476526 ~ 16479402 (+)
G372381 NA non-coding downstream 120924 16558656 ~ 16559057 (+)
G372480 NA non-coding downstream 135112 16572844 ~ 16573465 (+)
G372505 NA non-coding downstream 169600 16607332 ~ 16607737 (+)
G372506 NA non-coding downstream 171770 16609502 ~ 16609777 (+)
G372281 LOC106569177 other upstream 213330 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 639141 15791559 ~ 15795122 (+)
G371182 NA other upstream 1305446 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1380707 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1628792 14798616 ~ 14805526 (+)
G372373 NA other downstream 297910 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 432702 16870434 ~ 16882185 (+)
G373726 NA other downstream 1266381 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1629711 18067350 ~ 18177035 (+)
G376320 NA other downstream 3545529 19983261 ~ 19983848 (+)

Expression


Co-expression Network