ppiab (ppia1)


Basic Information

Item Value
gene id ppiab
gene name ppia1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16474090 ~ 16479578 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601941.2
CTTGCTGATCAAACGGGTGTGCAGGGGAAGTGACCATTGTTCTAATTTATTCAGCCGCAAGACCTTTAATTGGTTAAATCCGATGTCACTCAGCAGCCCCAGTCTTCTTATTGGTTCTCATTGCCTCCGGGGGCTTCCCTTGGTGCGCATATATATCTCGTATAAACGGCAGCATTTCCGTTCCGATTCAGCTGCGGCACCGTCCTTGTATCTACTGTCTGCACTCGTGtagtttcacaaaaaaataaagtttaatCCCAATCATGCCTAACCCCAGAGTTTACTTCGACATCACTATCGGCGATACCCCCGCCGGAAGGATTGAAATGGAGCTTTTTGCAGATGTTGTCCCCAAGACTGCAGAGAACTTCCGTGTCCTGTGCACTGGGGACAAGGGGTTTGGCTACAAGGGCTCCAGCTTCCATCGCATCATCCCCGGTTTCATGTGCCAGGGCGGAGACTTCACCAACCACAATGGAACTGGGGGCAAGTCCATCTACGGCAATAAGTTTGCTGACGAGAACTTCACCCTGAAGCACACAGGCATGGGCTGTCTGTCCATGGCCAACGCTGGCCCTAACACCAACGGGTCCCAGTTCTTTATCTGCACTGCGAACACTGACTGGCTGAACGGCAAGCATGTTGTGTTTGGCAAGGTGGTCGAGGGCCTCAACATCATCGCTAGCATGGAGAAGAAGGGTTCCAGCAGCGGCAAGTGTTCCGCCAAGGTCGCCATCGCTGACTGCGGAGAGCTCTGAGCGTCCCTCCCACCCCTCCTTCACCCAGCGTTGAGCCTTTCCTCCCTTGTTCCCTCCATGCAGCTCTAAGCATCAACCTCTCCTTACTTCCCCTTGATCTCTCCCCTCCCCAGAATCAAAAATATTCCCTAATATTGAGATTAGTTTTTTTACCATTCCTCTCCCTTAGGGAACGGTTTGTCCTGTGTCTGAACTTGTTTCATTTGTGGCTTGCCTTTATTTTGCATTTTGAATTGTCCCATGTGGACCACTTTTGTTTAACAAAATCAGAATAAAGTGGCAAAAGACTCCTTAACTGAC

Function

NR:

description
2-peptidylprolyl isomerase A

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0001666 response to hypoxia biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K01802 E5.2.1.8; peptidylprolyl isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601941.2 True 1058 mRNA 0.50 5 16474090 16479578

Neighbor

gene id symbol gene type direction distance location
LOC110522841 LOC106569125 coding downstream 43310 16427503 ~ 16430780 (-)
LOC110523325 LOC106569195 coding downstream 52068 16416981 ~ 16422022 (-)
si:dkey-34e4.1 LOC106569177 coding downstream 63837 16218314 ~ 16410253 (-)
LOC118964745 NA coding downstream 269088 16203690 ~ 16205002 (-)
garnl3 LOC106562762 coding downstream 352780 15938951 ~ 16121310 (-)
zmiz2 zmiz2 coding upstream 570 16480148 ~ 16516827 (-)
ogdhb ogdh coding upstream 79832 16559410 ~ 16602933 (-)
LOC110523332 LOC106569240 coding upstream 135047 16614625 ~ 16678865 (-)
nudcd3 LOC106569287 coding upstream 201306 16680884 ~ 16690718 (-)
gnsb gns coding upstream 212992 16692570 ~ 16711872 (-)
G372816 NA non-coding downstream 36790 16436012 ~ 16437300 (-)
G372773 NA non-coding downstream 109240 16364644 ~ 16364850 (-)
G372772 NA non-coding downstream 109996 16363875 ~ 16364094 (-)
G372761 NA non-coding downstream 130941 16342844 ~ 16343149 (-)
G372760 NA non-coding downstream 132386 16341502 ~ 16341704 (-)
G372876 NA non-coding upstream 99501 16579079 ~ 16579741 (-)
G372892 NA non-coding upstream 144517 16624095 ~ 16624702 (-)
G372901 NA non-coding upstream 165651 16645229 ~ 16646216 (-)
G372909 NA non-coding upstream 184067 16663645 ~ 16664178 (-)
G372929 NA non-coding upstream 217769 16697347 ~ 16700089 (-)
G372123 NA other downstream 492875 15978502 ~ 15981215 (-)
G372122 NA other downstream 497974 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 775761 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 1349301 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 1478931 14988147 ~ 14995197 (-)
LOC110523341 LOC106569324 other upstream 454657 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 644459 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1009448 17483696 ~ 17521507 (-)
G374189 NA other upstream 1523242 18002820 ~ 18003170 (-)
G374786 NA other upstream 2078562 18558140 ~ 18559167 (-)

Expression


Co-expression Network