pargl (LOC106569224)


Basic Information

Item Value
gene id pargl
gene name LOC106569224
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16516800 ~ 16557705 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601940.2
TTCATGTCCCTCACACACCCTACACAAGGCTAGCGACTGACTTTTCTCCTCGCCCCTAGACCATAGTAGCTGATCATTACAGAAGGAGTCATCGAGAGAGATGTCACCCCTGCCTCCACGGTGACGTCGGTTCGGTATGGCCGATCGTAACGACAGTTGCCAAATGAAAGCTGTCATGCAGAATGACGCCGCCATGCAGAACAAGAACAGGGATCAGGGGGTTAAACGCAACCCAAACGGAGAGGTCCCTGTTGGAAACCTGGTCGACATTGACAAAACTTCGGTCACCAAATCACtgcacagagacagtgagagagaaagggagaaagagggggatggaaAGGCGGGTGGAGTAGGGGACGCAAATAGCGGGAAGGATAGAGGAAGGAAAAGAGACACGGAGGGAgcgaggggtgaggaggagaagaggtcgTGCTGCTCTCAGAAGCTGAAGAAAGTCCCTCAGTGTCACGTGGAGCTGGAGCAGCTGTCCTTCAGCAGAACTCACAACGTCCTCATAGATGTGAATGAGTTCCACCATAAAAGGACATTAAAACCTCATTCTGGACGGCATGTGTGGCACAGTGACTTTGTTAAGATGCCCTGCTCACCAGAAAGCCTCATCAAGACTGGATGGGTAACCAGCTCTGAGCGAAGTCGGTGGGAGGTGGTCTCTAAACAGCTGGAGAGTCTGGCCAAGAAGACCACTGCATCAGTGGGTGACGTAGAGAAAGCCATAAAGAAATACAACCCAAAGTATGAAGATCAATGGTCCTTTGATGCCCTGCATACCTTTGTTCAGAAATCACCCAAAGAAGAGAAATTCTACATGTCTGTTTTTCCTAAGATAGCAGAGCTGGCTTCCAGCCTGCCTCACTATATCAAGAAGgctatccCTCTACTCAAGAAGGGCCAGACTCAGTCTATCACGTTGTCCCAGAGTCAGATAGCTTGTCTGCTGGCCAACGCCTTCTACTGCACCTTCCCCCACCGCAACTCTCCCAACCCCAGAGCAGAGTACCACAACTACCCCACCATCAACTTTAACAGtCTGTTTGAAAAGTGgtctgagaggaagagagagaagctgAGAGCCCTCCTTCATTACTTCCACACTGTCACAGACCCAGCGACCAGGCCCAGTGGACTGGTGACCTTTGAGAGGCGCTacatcagagacagagacatgcccCACTGGGGGagttGTAAGGAGACTGTTCCTAAACTCCACGTCAGCTCAGCAGGCTGCATAGAGGAACAGGGAGCAGGGATGTTACAGgtggACTTTGCCTGTAACATGATAGGAGGTGGAGTGTTGGGCTCAGGTCTGGTTCAGGAGGAGATTCTGTTCCTGATGAACCCTGAACTCATCGTATCTCGACTCTTCACTGAGAAACTAGGAGACAATGAGTGTCTCTTcatcacaggttctCAACAGTTCAGTCATTACAGTGGCTACAGTGACACTTTTAAGTGGGAAGGGCCTCACAGAGACAACTTTAAGAGGGATGAGTGGCAGAGGCTACACAGACAGATTGTGGCCATGGATGCTCTCCACTTCAGACACCAGAGAGAACAGTACAACATGAAACAGGTCACCAGGGAACTCAACAAGGCGTACTGTGGCTTTAAGGCAGATGACAACACTTACCCAGACTTCCTTCCTGACATCGCCACGGGAAACTGGGGCTGCGGAGCCTTCAATGGAGACCCCAAACTTAAAGCTCTGGTCCAGCTGATGTCTGCAGCCAGGGCCAAGAGGGGCGTGGCCTTCTTCACATTCAATAACTTAATCTTGGAGAGAGAGCTGCAGGACATGCACCACCTACTGGTCACACACAGAACTACAGTGGgTGAGCTGTATGAGTTGCTGGTTGACTACTGTGCTGTGATACAGTTGGCTCACACACATGCGGACCTGTTTGACTGGATCAGGAATACCCTGAAACACAGGAGTCAGCTGTGAGGACACATCTACATACTCTAAAGgagcttcctttccttgtctccattcattttttaacattattgagatgcaccccagaGATAGAGTGGCTCTATGAATGATCTGTGGATAGAAACATGGTACAGTTCCAAGTAATGGTTGATTATGAATGTGTTTGTCTTTTCAATAGTTACACTGTTCCTAAATCAAACTGATACATTTGTAACTACTGCATACTGAACTATTTAGAAAACGACTAAATGTGATGATAAAACAAAGCTAATGAAATGATGTCAACAAAATCAGGGGTCCTGCTTTTTGATTTGTCCCTTGATGATAGCCAACAATTTAACCATCAccagtcatatatatatatacatgcagtgtactgtaaaatactctaaaattataatttttttcttTAAACATTTTGAATAAATTCCTCTTTATAATCTA
>XM_021601938.2
CACACCCTACACAAGGCTAGCGACTGACTTTTCTCCTCGCCCCTAGACCATAGTAGCTGATCATTACAGAAGGAGTCATCGAGAGAGATGTCACCCCTGCCTCCACGGTGACGTCGGTTCGgtgtctgcagtgtgtgtgcagAGGTGTCTGCAGTATTCTGCTAGAGGGCAGCGTAGCGTGGAGAAAACACTCCGACCTGCAGTTTTCCGTTGCCCTGGAAACAGGTATGGCCGATCGTAACGACAGTTGCCAAATGAAAGCTGTCATGCAGAATGACGCCGCCATGCAGAACAAGAACAGGGATCAGGGGGTTAAACGCAACCCAAACGGAGAGGTCCCTGTTGGAAACCTGGTCGACATTGACAAAACTTCGGTCACCAAATCACtgcacagagacagtgagagagaaagggagaaagagggggatggaaAGGCGGGTGGAGTAGGGGACGCAAATAGCGGGAAGGATAGAGGAAGGAAAAGAGACACGGAGGGAgcgaggggtgaggaggagaagaggtcgTGCTGCTCTCAGAAGCTGAAGAAAGTCCCTCAGTGTCACGTGGAGCTGGAGCAGCTGTCCTTCAGCAGAACTCACAACGTCCTCATAGATGTGAATGAGTTCCACCATAAAAGGACATTAAAACCTCATTCTGGACGGCATGTGTGGCACAGTGACTTTGTTAAGATGCCCTGCTCACCAGAAAGCCTCATCAAGACTGGATGGGTAACCAGCTCTGAGCGAAGTCGGTGGGAGGTGGTCTCTAAACAGCTGGAGAGTCTGGCCAAGAAGACCACTGCATCAGTGGGTGACGTAGAGAAAGCCATAAAGAAATACAACCCAAAGTATGAAGATCAATGGTCCTTTGATGCCCTGCATACCTTTGTTCAGAAATCACCCAAAGAAGAGAAATTCTACATGTCTGTTTTTCCTAAGATAGCAGAGCTGGCTTCCAGCCTGCCTCACTATATCAAGAAGgctatccCTCTACTCAAGAAGGGCCAGACTCAGTCTATCACGTTGTCCCAGAGTCAGATAGCTTGTCTGCTGGCCAACGCCTTCTACTGCACCTTCCCCCACCGCAACTCTCCCAACCCCAGAGCAGAGTACCACAACTACCCCACCATCAACTTTAACAGtCTGTTTGAAAAGTGgtctgagaggaagagagagaagctgAGAGCCCTCCTTCATTACTTCCACACTGTCACAGACCCAGCGACCAGGCCCAGTGGACTGGTGACCTTTGAGAGGCGCTacatcagagacagagacatgcccCACTGGGGGagttGTAAGGAGACTGTTCCTAAACTCCACGTCAGCTCAGCAGGCTGCATAGAGGAACAGGGAGCAGGGATGTTACAGgtggACTTTGCCTGTAACATGATAGGAGGTGGAGTGTTGGGCTCAGGTCTGGTTCAGGAGGAGATTCTGTTCCTGATGAACCCTGAACTCATCGTATCTCGACTCTTCACTGAGAAACTAGGAGACAATGAGTGTCTCTTcatcacaggttctCAACAGTTCAGTCATTACAGTGGCTACAGTGACACTTTTAAGTGGGAAGGGCCTCACAGAGACAACTTTAAGAGGGATGAGTGGCAGAGGCTACACAGACAGATTGTGGCCATGGATGCTCTCCACTTCAGACACCAGAGAGAACAGTACAACATGAAACAGGTCACCAGGGAACTCAACAAGGCGTACTGTGGCTTTAAGGCAGATGACAACACTTACCCAGACTTCCTTCCTGACATCGCCACGGGAAACTGGGGCTGCGGAGCCTTCAATGGAGACCCCAAACTTAAAGCTCTGGTCCAGCTGATGTCTGCAGCCAGGGCCAAGAGGGGCGTGGCCTTCTTCACATTCAATAACTTAATCTTGGAGAGAGAGCTGCAGGACATGCACCACCTACTGGTCACACACAGAACTACAGTGGgTGAGCTGTATGAGTTGCTGGTTGACTACTGTGCTGTGATACAGTTGGCTCACACACATGCGGACCTGTTTGACTGGATCAGGAATACCCTGAAACACAGGAGTCAGCTGTGAGGACACATCTACATACTCTAAAGgagcttcctttccttgtctccattcattttttaacattattgagatgcaccccagaGATAGAGTGGCTCTATGAATGATCTGTGGATAGAAACATGGTACAGTTCCAAGTAATGGTTGATTATGAATGTGTTTGTCTTTTCAATAGTTACACTGTTCCTAAATCAAACTGATACATTTGTAACTACTGCATACTGAACTATTTAGAAAACGACTAAATGTGATGATAAAACAAAGCTAATGAAATGATGTCAACAAAATCAGGGGTCCTGCTTTTTGATTTGTCCCTTGATGATAGCCAACAATTTAACCATCAccagtcatatatatatatacatgcagtgtactgtaaaatactctaaaattataatttttttcttTAAACATTTTGAATAAATTCCTCTTTATAATCTA
>XM_021601937.2
GTTACGTCATATGCACAGTCGACGTGCTTGAAAATTTGCCTAGTCTACGTTTCACTTTCATTTTCAGGATTGCTGGAACTTCGCGAAGAGTTCTAGATGGAAAAGCACATATTTTTGCTCTTCAGAAATTAGCTGCGGATTCGGGCATCATTTAAGTATGGCCGATCGTAACGACAGTTGCCAAATGAAAGCTGTCATGCAGAATGACGCCGCCATGCAGAACAAGAACAGGGATCAGGGGGTTAAACGCAACCCAAACGGAGAGGTCCCTGTTGGAAACCTGGTCGACATTGACAAAACTTCGGTCACCAAATCACtgcacagagacagtgagagagaaagggagaaagagggggatggaaAGGCGGGTGGAGTAGGGGACGCAAATAGCGGGAAGGATAGAGGAAGGAAAAGAGACACGGAGGGAgcgaggggtgaggaggagaagaggtcgTGCTGCTCTCAGAAGCTGAAGAAAGTCCCTCAGTGTCACGTGGAGCTGGAGCAGCTGTCCTTCAGCAGAACTCACAACGTCCTCATAGATGTGAATGAGTTCCACCATAAAAGGACATTAAAACCTCATTCTGGACGGCATGTGTGGCACAGTGACTTTGTTAAGATGCCCTGCTCACCAGAAAGCCTCATCAAGACTGGATGGGTAACCAGCTCTGAGCGAAGTCGGTGGGAGGTGGTCTCTAAACAGCTGGAGAGTCTGGCCAAGAAGACCACTGCATCAGTGGGTGACGTAGAGAAAGCCATAAAGAAATACAACCCAAAGTATGAAGATCAATGGTCCTTTGATGCCCTGCATACCTTTGTTCAGAAATCACCCAAAGAAGAGAAATTCTACATGTCTGTTTTTCCTAAGATAGCAGAGCTGGCTTCCAGCCTGCCTCACTATATCAAGAAGgctatccCTCTACTCAAGAAGGGCCAGACTCAGTCTATCACGTTGTCCCAGAGTCAGATAGCTTGTCTGCTGGCCAACGCCTTCTACTGCACCTTCCCCCACCGCAACTCTCCCAACCCCAGAGCAGAGTACCACAACTACCCCACCATCAACTTTAACAGtCTGTTTGAAAAGTGgtctgagaggaagagagagaagctgAGAGCCCTCCTTCATTACTTCCACACTGTCACAGACCCAGCGACCAGGCCCAGTGGACTGGTGACCTTTGAGAGGCGCTacatcagagacagagacatgcccCACTGGGGGagttGTAAGGAGACTGTTCCTAAACTCCACGTCAGCTCAGCAGGCTGCATAGAGGAACAGGGAGCAGGGATGTTACAGgtggACTTTGCCTGTAACATGATAGGAGGTGGAGTGTTGGGCTCAGGTCTGGTTCAGGAGGAGATTCTGTTCCTGATGAACCCTGAACTCATCGTATCTCGACTCTTCACTGAGAAACTAGGAGACAATGAGTGTCTCTTcatcacaggttctCAACAGTTCAGTCATTACAGTGGCTACAGTGACACTTTTAAGTGGGAAGGGCCTCACAGAGACAACTTTAAGAGGGATGAGTGGCAGAGGCTACACAGACAGATTGTGGCCATGGATGCTCTCCACTTCAGACACCAGAGAGAACAGTACAACATGAAACAGGTCACCAGGGAACTCAACAAGGCGTACTGTGGCTTTAAGGCAGATGACAACACTTACCCAGACTTCCTTCCTGACATCGCCACGGGAAACTGGGGCTGCGGAGCCTTCAATGGAGACCCCAAACTTAAAGCTCTGGTCCAGCTGATGTCTGCAGCCAGGGCCAAGAGGGGCGTGGCCTTCTTCACATTCAATAACTTAATCTTGGAGAGAGAGCTGCAGGACATGCACCACCTACTGGTCACACACAGAACTACAGTGGgTGAGCTGTATGAGTTGCTGGTTGACTACTGTGCTGTGATACAGTTGGCTCACACACATGCGGACCTGTTTGACTGGATCAGGAATACCCTGAAACACAGGAGTCAGCTGTGAGGACACATCTACATACTCTAAAGgagcttcctttccttgtctccattcattttttaacattattgagatgcaccccagaGATAGAGTGGCTCTATGAATGATCTGTGGATAGAAACATGGTACAGTTCCAAGTAATGGTTGATTATGAATGTGTTTGTCTTTTCAATAGTTACACTGTTCCTAAATCAAACTGATACATTTGTAACTACTGCATACTGAACTATTTAGAAAACGACTAAATGTGATGATAAAACAAAGCTAATGAAATGATGTCAACAAAATCAGGGGTCCTGCTTTTTGATTTGTCCCTTGATGATAGCCAACAATTTAACCATCAccagtcatatatatatatacatgcagtgtactgtaaaatactctaaaattataatttttttcttTAAACATTTTGAATAAATTCCTCTTTATAATCTA

Function

NR:

description
poly(ADP-ribose) glycohydrolase-like isoform X1

GO: NA

KEGG:

id description
K07759 PARG; poly(ADP-ribose) glycohydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601940.2 False 2401 mRNA 0.47 16 16516800 16557705
XM_021601938.2 False 2492 mRNA 0.48 17 16516813 16557705
XM_021601937.2 True 2422 mRNA 0.47 16 16524237 16557705

Neighbor

gene id symbol gene type direction distance location
LOC110523327 LOC105015301 coding upstream 46458 16454595 ~ 16470342 (+)
LOC110523326 dusp26 coding upstream 79068 16434263 ~ 16437732 (+)
ptges ptges coding upstream 658440 15852569 ~ 15858360 (+)
usp20 LOC106569850 coding upstream 677341 15816800 ~ 15839459 (+)
LOC118964570 NA coding upstream 685059 15829533 ~ 15831741 (+)
LOC110523336 NA coding downstream 133200 16690905 ~ 16694551 (+)
polm LOC106569276 coding downstream 154477 16712182 ~ 16726009 (+)
ved LOC106569620 coding downstream 174931 16732636 ~ 16735129 (+)
purbb LOC106562912 coding downstream 183648 16741353 ~ 16744067 (+)
LOC110523342 LOC106569363 coding downstream 391697 16949402 ~ 16967809 (+)
G372374 NA non-coding upstream 37398 16476526 ~ 16479402 (+)
G372380 NA non-coding upstream 41215 16401132 ~ 16475585 (+)
G372345 NA non-coding upstream 161488 16355092 ~ 16355312 (+)
G372342 NA non-coding upstream 163560 16353024 ~ 16353240 (+)
G372333 NA non-coding upstream 181247 16335185 ~ 16335553 (+)
G372381 NA non-coding downstream 951 16558656 ~ 16559057 (+)
G372480 NA non-coding downstream 15139 16572844 ~ 16573465 (+)
G372505 NA non-coding downstream 49627 16607332 ~ 16607737 (+)
G372506 NA non-coding downstream 51797 16609502 ~ 16609777 (+)
G372507 LOC106569240 non-coding downstream 52191 16609896 ~ 16662496 (+)
G372281 LOC106569177 other upstream 295867 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 721678 15791559 ~ 15795122 (+)
G371182 NA other upstream 1387983 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1463244 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1711329 14798616 ~ 14805526 (+)
G372373 NA other downstream 177937 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 312729 16870434 ~ 16882185 (+)
G373726 NA other downstream 1146408 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1509738 18067350 ~ 18177035 (+)
G376320 NA other downstream 3425556 19983261 ~ 19983848 (+)

Expression


Co-expression Network