st8sia5 (st8sia5)


Basic Information

Item Value
gene id st8sia5
gene name st8sia5
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16995394 ~ 17012011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601962.2
ggcaaaagaaagaattccatcCATCTGCATTGCCTGCCATTGTCTGTCCAGCCTCTCGATCGAGCGCACCTCCCACTCGAGAGGTTATCGCCCTGATCTCAAAGAAATGTCAGGCATTTTTGACGAAACATTTCATGTTTTGTGTACCATCAGCCTTGCAAAATACCAGAATATTTGTATTCTACAATTTCTAACCAAATCACTTTCCGACCGGAATCGTAGCCTATATTTCTATGATTTATATAGGCCAATGAGATCAATGCTGTGACCGCAGCGAAGGATAGGTTAGTAAACATATCATAAAGACATTTGGACAATGTCCTCACGAATGCTTTCACGATAAACCTGTGTGATTGATTCTGAATGCTGCGCGGAGAGAAGGCTAATTCTGGAGTTTTGGGCAACAGTGGATGCTGCGCCGAAGAATGGGATACTCCGACCCTACGTCGGGTAGAGATTTACTCGGCAATAGGTCGCTTTGTTTTATATTCATTTGCGCATTTGGACTGGTTACACTTTTACAACAGATTCTTTATGGCAAAAACTACATTAAAAGTGCGCAACAGTTTAGCCGACTCAAAGGAGACGAGACAGGAAATTGGACCGGCCCTGTTAATTTCTTGGATGATGGATCTCTGAAGCCTGCCAGAAATGGGAAGAAAAGGTATCTGGATTCATACGATGGATCCTATGACTACAACTCCACTGCATGTAAAGAGCTCAGACAGGAGATTATGGATGTCAAAGTCTTGACCATGGTGAAGACGTCGGAGCTGTTTGAGAGATGGAGGAACCTGCAGGTGTGCAAGTGGCAGCAGAACATGGTGGAGACTAACAACTTCAAGATGTCTCTGTCGCGTTGCTGTAATGCACCCTCCTTCTTGTTCACCACCAAGAGGAACACCCCAGCAGGCACCAAGCTGAGGTATGAGGTGGACACCAGTGGCATCCTGCCCATCACTACTGAGGTCTTCAAGATGTTCCCCGACGACATGCCGTACTCCAAGTCCCAGTTCAAGAAATGTGCTGTTGTTGGAAACGGAGGAATCATCAAGAACAGCAAATGTGGGAAGGAAATTGACTCAGCAGATTTTGTGTTTAGATGCAACATACCACCCATCAGCGAGAAGTATTCTGCTGATGTAGGCTCCAAAACAGATCTGGTGACGATTAATCCAAGTATTATAACAGAGAGgtTCCAGAAGCTAGAGAAGTGGCGGCGGCCATTTTATGAGGTTCTTCAGAACTATGAGAACTCGTCGGTGGTCCTACCCGCCTTCTACAACACGCGTAACACTGATGTCTCCTTCCGAGTAAAGTACATGCTAGACGACTTTGACTCCCAGAGGGGCGTGTTCTTCTTCCATCCTCAGTACCTGCTCAACGTCCAGCGCTTCTGGGGTGTCCAGGGTGTCCGCGCCAAACGCCTCAGCAGCGGCCTGATGCTGGTCACCGCCGCCATGGAACTGTGCGAGGAGGTCCACCTCTACGGCTTCTGGGCATTTCCCATGAACCCCTCAGGCATCTTCATCACGCACCATTACTACGACAACGTCAAGCCCCGCCCCGGGTTCCACGCTATGCCCCACGAGATCTTTAACTTCCTGCACATGCACACGCGAGGCATCCTCCATGTACACTCGGGAGCCTGCACGTGATTGTGAACCAGAGTCACGCCCACACCGCAATGTATTGTGGGGAGTCACCATTTGTTTTTGTCTGTTGTCTGTCACCATCTGTTTTTGTCTGTTGTACATTTTTCATATCTTAATTGAAAggtacaatgttttttttcttacaGTCACAAGAGCCTTTTAAACTAACACCGTATATCTGGGCTCTCTACAGTAGCTCCATGAATTGGAGGTTGCTTGCTTTAATGCAAACACTGGCTACTTAATGTGTTTCTTACTCTCTTGCTGAATAAGCAACTCCAATGACTGCCGGTATTTCTGATTCTGTTAATGTAGGTTGCTTGTTTTAATGTAAAGTGGTCTTTCCTAGTGATGTCGTTTTTGTGAAATCTTAGTGGCTCGGTGGTACTACTGCTGTACAGATTTGAACTCAACGTTGCACAAGTATTTACACTGATATAGGGCCACTCTGTgtgtccctcacctcctcctgtaCTTTGTCTTTGCCACTTCCTGTGTTATGATTCCCACCCACCTATGTGCTATCTTTCTCAGACACTGTGGGTGAGGCAGCTTTTATGTATGTCTGTGTAAAAAGCCTGAACACTATTGATGTTGTAGCAAATCCAAAATATATCTTCAAAGATCCAACAGTTGAACTTTCTGTTGTCCAGCTACATTAACCGGTTTTACATGGGTAAATATTTCATATAAAACACTGTTAACACTCCTGACCAGAGATTACCTTTTTCACAGGTCCACTTTCTTCTGTATAACTAACTTGCCAAACGCTGGAATATATCCTTGGATATTATTGATGTGAAATGGTGGTGTTTTAATTGCTCGCTGTTTTTGGACAAAGGCCAGATGATTAAtattttataatctccaccaccATAGTAAAATCTCTGACCTCCAGAACAGACAGTCCTAGTCACTCTGCATGGCCAGGAGTGTTTCCTCACCTTGGGACCTGACTGGGAACACTCTAGGTCCTAGTTGTAGCCTATATTATGTTATAGCCTGTAACTAGGGCTTTGAGgtgttcctggtcaggtcacatagTCAAAGAAATATACCCTGGCCCTAGTTATTGGGTACTGTTGAGCAATCTGATTTGTCGCTGTCATTCATGTCTTAAAACCACGCTGCCTTACTGTACAAATCCTCTCTCAGATATGCAATTCACCCCTGCATCACTTATCTAACGGATGATCGTATCAAACAAACTCTTGGTCTTACTGTCTGCTGACAGTGTAACCTCATTAAGAAAAGGCTCACTTCTGCTGTTGAAATGACTTAATATTCTATAATTACTGTAAAATAGAATTCCATTTGCATACTCGTGATGCTGTGCATGATGATACTGTATTATTTGCTTTGTGTGTGCCTGCAACCACCACTGAAATATGTTTACAATGATCAGCTTCTGCTAAAGCTCCCAGTGCACTGCGAGAGATGGAACCTTTTACATCACCAAACCTTGAATAGATTTTGAAAGAGAATTGAGTGATGGATGCACTTTTTCACAGATGATGGAAAGGAATGACTATTATCGGCCCGTTTTGAAATAAGATAATTATTGTCACTGCATCGTGTCATTTTCCCTTTGTGACAATGTACCCTTGAAAGCATTGTGGATCTCGGCTTTGGAATGCTGTATGTTTCTATGAATATTTATTGTGTTTAACTGTGACAGAGAAGAGGAACGTTGCTGACTGAACTGAAAACATAGGACCGTTCTTCTGTACATGCAATGCCCCAAATTACCATGATATTTAAAAGACATTACTCCTAAAAAATGTGGACGATTCTTTCACCTGTAACTCAGTCACACAGATTGTGTGTAAAAGACAAAATGCACAAGGTACATTTATTCaatctgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgcca
>XM_021601963.2
caaaagaaagaattccatcCATCTGCATTGCCTGCCATTGTCTGTCCAGCCTCTCGATCGAGCGCACCTCCCACTCGAGAGGTTATCGCCCTGATCTCAAAGAAATGTCAGGCATTTTTGACGAAACATTTCATGTTTTGTGTACCATCAGCCTTGCAAAATACCAGAATATTTGTATTCTACAATTTCTAACCAAATCACTTTCCGACCGGAATCGTAGCCTATATTTCTATGATTTATATAGGCCAATGAGATCAATGCTGTGACCGCAGCGAAGGATAGGTTAGTAAACATATCATAAAGACATTTGGACAATGTCCTCACGAATGCTTTCACGATAAACCTGTGTGATTGATTCTGAATGCTGCGCGGAGAGAAGGCTAATTCTGGAGTTTTGGGCAACAGTGGATGCTGCGCCGAAGAATGGGATACTCCGACCCTACGTCGGGTAGAGATTTACTCGGCAATAGGTCGCTTTGTTTTATATTCATTTGCGCATTTGGACTGGTTACACTTTTACAACAGATTCTTTATGGCAAAAACTACATTAAAAGGTATCTGGATTCATACGATGGATCCTATGACTACAACTCCACTGCATGTAAAGAGCTCAGACAGGAGATTATGGATGTCAAAGTCTTGACCATGGTGAAGACGTCGGAGCTGTTTGAGAGATGGAGGAACCTGCAGGTGTGCAAGTGGCAGCAGAACATGGTGGAGACTAACAACTTCAAGATGTCTCTGTCGCGTTGCTGTAATGCACCCTCCTTCTTGTTCACCACCAAGAGGAACACCCCAGCAGGCACCAAGCTGAGGTATGAGGTGGACACCAGTGGCATCCTGCCCATCACTACTGAGGTCTTCAAGATGTTCCCCGACGACATGCCGTACTCCAAGTCCCAGTTCAAGAAATGTGCTGTTGTTGGAAACGGAGGAATCATCAAGAACAGCAAATGTGGGAAGGAAATTGACTCAGCAGATTTTGTGTTTAGATGCAACATACCACCCATCAGCGAGAAGTATTCTGCTGATGTAGGCTCCAAAACAGATCTGGTGACGATTAATCCAAGTATTATAACAGAGAGgtTCCAGAAGCTAGAGAAGTGGCGGCGGCCATTTTATGAGGTTCTTCAGAACTATGAGAACTCGTCGGTGGTCCTACCCGCCTTCTACAACACGCGTAACACTGATGTCTCCTTCCGAGTAAAGTACATGCTAGACGACTTTGACTCCCAGAGGGGCGTGTTCTTCTTCCATCCTCAGTACCTGCTCAACGTCCAGCGCTTCTGGGGTGTCCAGGGTGTCCGCGCCAAACGCCTCAGCAGCGGCCTGATGCTGGTCACCGCCGCCATGGAACTGTGCGAGGAGGTCCACCTCTACGGCTTCTGGGCATTTCCCATGAACCCCTCAGGCATCTTCATCACGCACCATTACTACGACAACGTCAAGCCCCGCCCCGGGTTCCACGCTATGCCCCACGAGATCTTTAACTTCCTGCACATGCACACGCGAGGCATCCTCCATGTACACTCGGGAGCCTGCACGTGATTGTGAACCAGAGTCACGCCCACACCGCAATGTATTGTGGGGAGTCACCATTTGTTTTTGTCTGTTGTCTGTCACCATCTGTTTTTGTCTGTTGTACATTTTTCATATCTTAATTGAAAggtacaatgttttttttcttacaGTCACAAGAGCCTTTTAAACTAACACCGTATATCTGGGCTCTCTACAGTAGCTCCATGAATTGGAGGTTGCTTGCTTTAATGCAAACACTGGCTACTTAATGTGTTTCTTACTCTCTTGCTGAATAAGCAACTCCAATGACTGCCGGTATTTCTGATTCTGTTAATGTAGGTTGCTTGTTTTAATGTAAAGTGGTCTTTCCTAGTGATGTCGTTTTTGTGAAATCTTAGTGGCTCGGTGGTACTACTGCTGTACAGATTTGAACTCAACGTTGCACAAGTATTTACACTGATATAGGGCCACTCTGTgtgtccctcacctcctcctgtaCTTTGTCTTTGCCACTTCCTGTGTTATGATTCCCACCCACCTATGTGCTATCTTTCTCAGACACTGTGGGTGAGGCAGCTTTTATGTATGTCTGTGTAAAAAGCCTGAACACTATTGATGTTGTAGCAAATCCAAAATATATCTTCAAAGATCCAACAGTTGAACTTTCTGTTGTCCAGCTACATTAACCGGTTTTACATGGGTAAATATTTCATATAAAACACTGTTAACACTCCTGACCAGAGATTACCTTTTTCACAGGTCCACTTTCTTCTGTATAACTAACTTGCCAAACGCTGGAATATATCCTTGGATATTATTGATGTGAAATGGTGGTGTTTTAATTGCTCGCTGTTTTTGGACAAAGGCCAGATGATTAAtattttataatctccaccaccATAGTAAAATCTCTGACCTCCAGAACAGACAGTCCTAGTCACTCTGCATGGCCAGGAGTGTTTCCTCACCTTGGGACCTGACTGGGAACACTCTAGGTCCTAGTTGTAGCCTATATTATGTTATAGCCTGTAACTAGGGCTTTGAGgtgttcctggtcaggtcacatagTCAAAGAAATATACCCTGGCCCTAGTTATTGGGTACTGTTGAGCAATCTGATTTGTCGCTGTCATTCATGTCTTAAAACCACGCTGCCTTACTGTACAAATCCTCTCTCAGATATGCAATTCACCCCTGCATCACTTATCTAACGGATGATCGTATCAAACAAACTCTTGGTCTTACTGTCTGCTGACAGTGTAACCTCATTAAGAAAAGGCTCACTTCTGCTGTTGAAATGACTTAATATTCTATAATTACTGTAAAATAGAATTCCATTTGCATACTCGTGATGCTGTGCATGATGATACTGTATTATTTGCTTTGTGTGTGCCTGCAACCACCACTGAAATATGTTTACAATGATCAGCTTCTGCTAAAGCTCCCAGTGCACTGCGAGAGATGGAACCTTTTACATCACCAAACCTTGAATAGATTTTGAAAGAGAATTGAGTGATGGATGCACTTTTTCACAGATGATGGAAAGGAATGACTATTATCGGCCCGTTTTGAAATAAGATAATTATTGTCACTGCATCGTGTCATTTTCCCTTTGTGACAATGTACCCTTGAAAGCATTGTGGATCTCGGCTTTGGAATGCTGTATGTTTCTATGAATATTTATTGTGTTTAACTGTGACAGAGAAGAGGAACGTTGCTGACTGAACTGAAAACATAGGACCGTTCTTCTGTACATGCAATGCCCCAAATTACCATGATATTTAAAAGACATTACTCCTAAAAAATGTGGACGATTCTTTCACCTGTAACTCAGTCACACAGATTGTGTGTAAAAGACAAAATGCACAAGGTACATTTATTCaatctgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgcca

Function

symbol description
st8sia5 Predicted to enable alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity. Predicted to be involved in N-glycan processing; oligosaccharide metabolic process; and protein glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Is expressed in nervous system; otic vesicle; and unfertilized egg. Orthologous to human ST8SIA5 (ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5).

NR:

description
alpha-2,8-sialyltransferase 8E-like isoform X3

GO: NA

KEGG:

id description
K03369 SIAT8E; alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8E)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601962.2 False 3572 mRNA 0.44 8 16995394 17012011
XM_021601963.2 True 3462 mRNA 0.44 7 16995396 17012011

Neighbor

gene id symbol gene type direction distance location
LOC110523342 LOC106569363 coding upstream 27585 16949402 ~ 16967809 (+)
purbb LOC106562912 coding upstream 251327 16741353 ~ 16744067 (+)
ved LOC106569620 coding upstream 260265 16732636 ~ 16735129 (+)
polm LOC106569276 coding upstream 269385 16712182 ~ 16726009 (+)
LOC110523336 NA coding upstream 301964 16690905 ~ 16694551 (+)
LOC110522812 loxhd1 coding downstream 7576 17019587 ~ 17071539 (+)
atp5fa1 LOC106569424 coding downstream 107776 17119787 ~ 17125777 (+)
LOC100136246 LOC106569430 coding downstream 114345 17126356 ~ 17147778 (+)
LOC110523352 LOC106569472 coding downstream 179405 17191416 ~ 17217186 (+)
LOC110523353 LOC106569485 coding downstream 223801 17235812 ~ 17242911 (+)
G372680 NA non-coding upstream 3465 16990812 ~ 16991929 (+)
G372676 NA non-coding upstream 7995 16987199 ~ 16987399 (+)
G372664 NA non-coding upstream 13249 16958997 ~ 16982145 (+)
G372621 LOC106569151 non-coding upstream 126330 16868670 ~ 16869064 (+)
G372617 NA non-coding upstream 128890 16866270 ~ 16866504 (+)
G372685 NA non-coding downstream 4389 17016400 ~ 17016603 (+)
G373068 NA non-coding downstream 23347 17035358 ~ 17037364 (+)
G373073 NA non-coding downstream 33003 17045014 ~ 17045237 (+)
G373090 NA non-coding downstream 57170 17069181 ~ 17069425 (+)
G372618 LOC105030512 other upstream 113209 16870434 ~ 16882185 (+)
G372373 NA other upstream 256894 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 774461 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1200272 15791559 ~ 15795122 (+)
G371182 NA other upstream 1866577 15124290 ~ 15128817 (+)
G373726 NA other downstream 692102 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1055432 18067350 ~ 18177035 (+)
G376320 NA other downstream 2971250 19983261 ~ 19983848 (+)
G377022 NA other downstream 3579469 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 3731573 20508074 ~ 20759255 (+)

Expression


Co-expression Network