Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110522816 |
| gene name | LOC106568602 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 20508074 ~ 20759255 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: disabled homolog 2-interacting protein-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036977016.1 | False | 4520 | mRNA | 0.55 | 16 | 20508074 | 20759255 |
| XM_036977017.1 | False | 4517 | mRNA | 0.55 | 16 | 20508074 | 20759255 |
| XM_036977020.1 | False | 4385 | mRNA | 0.55 | 15 | 20508074 | 20759255 |
| XM_036977018.1 | False | 4711 | mRNA | 0.55 | 16 | 20536136 | 20759255 |
| XM_036977019.1 | False | 4714 | mRNA | 0.55 | 16 | 20536136 | 20759255 |
| XM_036977022.1 | False | 4426 | mRNA | 0.55 | 14 | 20646271 | 20759255 |
| XM_036977021.1 | False | 4233 | mRNA | 0.55 | 14 | 20671125 | 20759255 |
| TU428462 | True | 774 | TUCP | 0.60 | 4 | 20743584 | 20758501 |
20,280,000
20,320,000
20,360,000
20,400,000
20,440,000
20,480,000
20,520,000
20,560,000
20,600,000
20,640,000
20,680,000
20,720,000
20,760,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523393 | LOC106568920 | coding | upstream | 93918 | 20390530 ~ 20414156 (+) |
| LOC110523391 | LOC106568645 | coding | upstream | 126455 | 20051393 ~ 20381619 (+) |
| LOC110523383 | LOC106568686 | coding | upstream | 999009 | 19499604 ~ 19512291 (+) |
| LOC110523377 | LOC106568724 | coding | upstream | 1143985 | 19358271 ~ 19364089 (+) |
| LOC110523370 | fa69b | coding | upstream | 1929846 | 18558152 ~ 18578228 (+) |
| LOC110522817 | LOC106568462 | coding | downstream | 71856 | 20831111 ~ 20842676 (+) |
| pnx | LOC106568480 | coding | downstream | 99087 | 20858342 ~ 20859762 (+) |
| LOC110522818 | LOC106568484 | coding | downstream | 122683 | 20881938 ~ 20897867 (+) |
| LOC110523395 | LOC106568500 | coding | downstream | 138866 | 20898121 ~ 20910637 (+) |
| ccar2 | LOC106568504 | coding | downstream | 163759 | 20923014 ~ 20944043 (+) |
| G376972 | NA | non-coding | upstream | 3741 | 20504021 ~ 20504333 (+) |
| G376938 | NA | non-coding | upstream | 46734 | 20461004 ~ 20461340 (+) |
| G376867 | NA | non-coding | upstream | 86344 | 20420930 ~ 20421730 (+) |
| G376864 | NA | non-coding | upstream | 118319 | 20389505 ~ 20389755 (+) |
| G376862 | NA | non-coding | upstream | 119474 | 20388265 ~ 20388600 (+) |
| G377125 | NA | non-coding | downstream | 491 | 20759746 ~ 20760485 (+) |
| G377143 | LOC100194676 | non-coding | downstream | 40806 | 20800061 ~ 20846940 (+) |
| G377144 | LOC100194676 | non-coding | downstream | 90399 | 20849654 ~ 20851140 (+) |
| G377186 | NA | non-coding | downstream | 154897 | 20914152 ~ 20914533 (+) |
| G377195 | NA | non-coding | downstream | 157932 | 20917187 ~ 20917779 (+) |
| G376320 | NA | other | upstream | 524226 | 19983261 ~ 19983848 (+) |
| arhgef28a | LOC106568988 | other | upstream | 2424709 | 18067350 ~ 18177035 (+) |
| G373726 | NA | other | upstream | 2800317 | 17704113 ~ 17707757 (+) |
| G372618 | LOC105030512 | other | upstream | 3625889 | 16870434 ~ 16882185 (+) |
| G372373 | NA | other | upstream | 3769574 | 16735642 ~ 16738500 (+) |
| LOC110523400 | LOC106568542 | other | downstream | 348914 | 21108129 ~ 21160149 (+) |
| G378660 | NA | other | downstream | 1413280 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 1744497 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 1842855 | 22602110 ~ 22629669 (+) |
| G377107 | NA | non-coding | upstream | 941 | 20709523 ~ 20742643 (+) |
| G377106 | NA | non-coding | upstream | 34439 | 20708923 ~ 20709145 (+) |
| G377105 | NA | non-coding | upstream | 37687 | 20705691 ~ 20705897 (+) |
| G377099 | NA | non-coding | upstream | 41370 | 20697194 ~ 20702214 (+) |
| G377091 | NA | non-coding | upstream | 59269 | 20684113 ~ 20684315 (+) |
| G377022 | NA | other | upstream | 146721 | 20591480 ~ 20596863 (+) |
