Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523406 |
| gene name | crybb1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21473853 ~ 21477171 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| crybb1 | Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens and solid lens vesicle. Human ortholog(s) of this gene implicated in cataract and cataract 17 multiple types. Orthologous to human CRYBB1 (crystallin beta B1). |
| description |
|---|
| beta-crystallin B1-like |
| id | description |
|---|---|
| K23482 | CRYB; beta-crystallin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021602081.2 | True | 1094 | mRNA | 0.54 | 6 | 21473853 | 21477171 |
21,470,000
21,471,000
21,472,000
21,473,000
21,474,000
21,475,000
21,476,000
21,477,000
21,478,000
21,479,000
21,480,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| npm2b | LOC106592477 | coding | upstream | 185322 | 21277568 ~ 21288531 (+) |
| LOC110523400 | LOC106568542 | coding | upstream | 313713 | 21108129 ~ 21160149 (+) |
| LOC110522819 | LOC106568526 | coding | upstream | 374564 | 21050936 ~ 21099289 (+) |
| LOC110523398 | LOC100534606 | coding | upstream | 482477 | 20952149 ~ 20991376 (+) |
| ccar2 | LOC106568504 | coding | upstream | 529810 | 20923014 ~ 20944043 (+) |
| LOC110523407 | LOC106568363 | coding | downstream | 1514 | 21478685 ~ 21493435 (+) |
| LOC110523409 | LOC106565015 | coding | downstream | 41386 | 21518557 ~ 21521828 (+) |
| LOC110523408 | LOC106565015 | coding | downstream | 50384 | 21527555 ~ 21534161 (+) |
| LOC110523411 | LOC106568349 | coding | downstream | 101819 | 21578990 ~ 21597442 (+) |
| LOC110523412 | LOC106568387 | coding | downstream | 124862 | 21602033 ~ 21609081 (+) |
| G377455 | NA | non-coding | upstream | 18417 | 21450467 ~ 21455436 (+) |
| G377363 | NA | non-coding | upstream | 58027 | 21315677 ~ 21415826 (+) |
| G377416 | NA | non-coding | upstream | 76739 | 21396701 ~ 21397114 (+) |
| G377405 | NA | non-coding | upstream | 93706 | 21379586 ~ 21380147 (+) |
| G377364 | NA | non-coding | upstream | 100144 | 21371266 ~ 21373709 (+) |
| G377494 | NA | non-coding | downstream | 40574 | 21517745 ~ 21518246 (+) |
| G377505 | NA | non-coding | downstream | 73166 | 21550337 ~ 21550561 (+) |
| G377513 | NA | non-coding | downstream | 88103 | 21565274 ~ 21565606 (+) |
| G377517 | NA | non-coding | downstream | 91783 | 21568954 ~ 21569214 (+) |
| G377520 | NA | non-coding | downstream | 94038 | 21571209 ~ 21572272 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 637294 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | other | upstream | 715352 | 20508074 ~ 20759255 (+) |
| G377022 | NA | other | upstream | 876990 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 1490005 | 19983261 ~ 19983848 (+) |
| G378660 | NA | other | downstream | 695364 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 1026581 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 1124939 | 22602110 ~ 22629669 (+) |
| lhfpl2a | lhfpl2 | other | downstream | 1465121 | 22942205 ~ 23007315 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 2146793 | 23623921 ~ 23678038 (+) |
