Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523434 |
| gene name | LOC106567989 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 22177265 ~ 22179322 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Cytochrome c oxidase subunit 5B, mitochondrial precursor |
| id | name | namespace |
|---|---|---|
| GO:1902600 | proton transmembrane transport | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005740 | mitochondrial envelope | cellular_component |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021602118.2 | False | 908 | mRNA | 0.48 | 4 | 22177328 | 22179322 |
| TU431328 | True | 962 | TUCP | 0.48 | 4 | 22177265 | 22179313 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523430 | LOC106567981 | coding | downstream | 89462 | 22067901 ~ 22087866 (-) |
| march5 | march5 | coding | downstream | 131836 | 22042781 ~ 22045492 (-) |
| LOC110523428 | LOC105015193 | coding | downstream | 139380 | 22033823 ~ 22037948 (-) |
| LOC110523426 | LOC106567959 | coding | downstream | 155768 | 22003337 ~ 22021560 (-) |
| LOC110523425 | NA | coding | downstream | 217886 | 21957792 ~ 21959442 (-) |
| LOC110523433 | LOC106567986 | coding | upstream | 353 | 22179675 ~ 22191846 (-) |
| LOC110516770 | LOC106568012 | coding | upstream | 45211 | 22224533 ~ 22231921 (-) |
| LOC110522825 | LOC106568017 | coding | upstream | 180926 | 22360248 ~ 22439554 (-) |
| LOC110523438 | LOC106568028 | coding | upstream | 356269 | 22535591 ~ 22539412 (-) |
| c5h2orf42 | cssa01h2orf42 | coding | upstream | 532411 | 22711733 ~ 22717155 (-) |
| G379518 | NA | non-coding | downstream | 5850 | 22171197 ~ 22171478 (-) |
| G379514 | NA | non-coding | downstream | 16595 | 22160506 ~ 22160733 (-) |
| G379512 | NA | non-coding | downstream | 20733 | 22156388 ~ 22156595 (-) |
| G379434 | NA | non-coding | downstream | 109642 | 22066983 ~ 22067686 (-) |
| G379433 | NA | non-coding | downstream | 111119 | 22064742 ~ 22066209 (-) |
| G379550 | NA | non-coding | upstream | 59825 | 22239147 ~ 22239393 (-) |
| G379552 | NA | non-coding | upstream | 65712 | 22245034 ~ 22245423 (-) |
| G379556 | NA | non-coding | upstream | 177742 | 22357064 ~ 22358086 (-) |
| G379698 | NA | non-coding | upstream | 324540 | 22503862 ~ 22506136 (-) |
| G379745 | NA | non-coding | upstream | 438090 | 22617412 ~ 22662248 (-) |
| G378359 | NA | other | downstream | 385335 | 21791662 ~ 21791993 (-) |
| G377991 | NA | other | downstream | 1147545 | 21029458 ~ 21029783 (-) |
| G377809 | LOC106568602 | other | downstream | 1472188 | 20704613 ~ 20705140 (-) |
| G377800 | NA | other | downstream | 1482620 | 20694096 ~ 20694708 (-) |
| G374786 | NA | other | downstream | 3618161 | 18558140 ~ 18559167 (-) |
| jmy | LOC106568093 | other | upstream | 620378 | 22799696 ~ 22859199 (-) |
| LOC110522831 | LOC106563032 | other | upstream | 1367878 | 23488916 ~ 23556681 (-) |
| G380610 | LOC106567829 | other | upstream | 1530476 | 23709798 ~ 23711891 (-) |
| G380648 | NA | other | upstream | 1579717 | 23759039 ~ 23761807 (-) |
| LOC110523492 | LOC106567536 | other | upstream | 3259699 | 25437411 ~ 25441794 (-) |
