LOC110523456 (crhbp)


Basic Information

Item Value
gene id LOC110523456
gene name crhbp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 23370966 ~ 23391981 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036977079.1
ttttgGAGGACCAACCTATCAGACCTCTTACAGCAGGAACTAacatgtccacccaatcaaaggatcagagtatgaatctagtactgaaagcataagctacagctagctagcattgcagtgcataaaatgtgctgagtagttgactcaaagagagagaaagacaatagttgaacagttttgaacacattcatttcttcaaaaatgaaggagaagcatgAAAGAGAAAGCTAGCTATATTTtgttatattttatttttcactttcactcactagtgaatgcagctagctagtttagcctactcaaacacccgacTCAAAcggagagggatgctatgtttgctagctggctatggctattcAACACTGGAACTcatccaagtcaagGAAAATGAGATCACTCCAGAAGGATTATTTTCACTTCTTAATTCAGAACTCAAAAGAGAAATACCAGAGGAATTAATTTACAGCCGACCTCTCCggtgtCTGGACATGGTGGCAGCAGAGGGTCAGTTCACCTTTACAGCAGACCGGCCTCATCTCAGCTGTGCTGCTTTCTTCATCGCTGAGCCCAACCAGGTCATCAATGTGGAGTATGACAGCGTTGACATCGACTGCAGAAGTGGAGACTTCATCAaggTGTTTGATGGCTGGGTGATGAAGGGAGAGAAGTTCCCTAGTTCCCAGGATCACGCCCTGCCGCTGATGGAACGCTACGTAGACTACTGCGACTCCGGGACTGTCAGGAGAACCGTACGGTCATCTCAGAACGTTGCAATGGTGTTCTTCCGCGTTCACACCGTCGGCAGCTCCTTCACGCTGACTGTCAGGAAACCCATCAACCCTTTCCCCTGTAACATCATCTCCCAGACACCAGAGGGCAGCTTCACCATGGTGATACCCCAGCAGCACAGGAACTGCAGCTTCTCCATCATCTACCCCGTGGAGATCAAGATCGCTGAGCTCAGCCTGGGACACCTCAACGACTTCCCCATCAAGaagTCCATGCCAGGCTGTGCTGGAGCAGGGGACTTTGTGGAGCTGCTGGGAGGGAACGGGATGGACCCGTCTAAGATGTTCCCAGTAGCTGACCTCTGCTACAACTTCAACGGCCCCGCCCAGATGAAGATAGGTTGTGACAACACTGTGGTGAGAATGGTGTCCAGCGGTAGGTTTGTCAACCGGGTGGCGTTCCAATACCGGCTGCTGGACCGGCAGGAGCTGCAGAGGATCAAGGTGAACAGTGTGGAGGATTTCTGCTTCACTGGTTGAGctctccctatctatctctcCACCTCCTATATATACCACCTAGCTAATGGGGACCACCCATCACTGGCTGAGctctccctatctatctctcCACCTCCTATATATATACCACCTAGCTAATGGGGACCACCCATCACTGGCTGCCAAATCTACCATGAGACTGATTACAGAAAGAAATCCTGAGGATCGCCATAACGTTCTGTTCTGTACTCCTTTTTGAATTTAAAGAGattgatttattttttacctcatttgttttttttcttcactatATGTTAAATGAATTGTGGCTGGCGCTCAAGCTTAATAAAGAGTTATTTTGTGTTTGTGGGCAGTTCTGCTATTGGTTTGATTCCGTGTTTATGTTGTCTAAGTTGTGTGATTATATGAATGCCAGTGAAAACAGACCAGTGAGGGTGTTAGCCGGGTGTTTTGGTTCACGTTCTTTACAAGGAAGGGTGTTGAAAAACTGAATGTttctttgtatttattttgtgagACGATGTGTGTCGTTTTGGGACTGTGGCCGGAGGCAAGTGTTCAATAGAGTATGTTTAATACATGTTCATTGCTGTTATCTATATTTATTTGTATCAAACTATTTTTTTGTAATAAAACTGAGCTGCATGGTTAAGCACT
>XM_036977080.1
acacagtcacaggcGCACTGTGATGCCTATTGATTCCTCCTTTGCTCTCGTCACAAACACGCTATCTGGGGCACTGTGTATCAATTGATCTTTACGGAGTGCGTTTCTATTGAGAAGCGTGCGGTGCGTCGACCTATAAAAAGGAGTGTGGCTTGGAGCACTGGACCAGACTTTCCCCAGTTCTGTTCTTGAGGTGCGAGGGAGACtccagagagagatactgagcaATATGGAGGGGACTTTCCGAGAGCAGCTGTTCTTTGTTATGTTATGTCTGTCAGTTCTCAAGGGAGACGCCAGGTACATGGAGGAAAATGAGATCACTCCAGAAGGATTATTTTCACTTCTTAATTCAGAACTCAAAAGAGAAATACCAGAGGAATTAATTTACAGCCGACCTCTCCggtgtCTGGACATGGTGGCAGCAGAGGGTCAGTTCACCTTTACAGCAGACCGGCCTCATCTCAGCTGTGCTGCTTTCTTCATCGCTGAGCCCAACCAGGTCATCAATGTGGAGTATGACAGCGTTGACATCGACTGCAGAAGTGGAGACTTCATCAaggTGTTTGATGGCTGGGTGATGAAGGGAGAGAAGTTCCCTAGTTCCCAGGATCACGCCCTGCCGCTGATGGAACGCTACGTAGACTACTGCGACTCCGGGACTGTCAGGAGAACCGTACGGTCATCTCAGAACGTTGCAATGGTGTTCTTCCGCGTTCACACCGTCGGCAGCTCCTTCACGCTGACTGTCAGGAAACCCATCAACCCTTTCCCCTGTAACATCATCTCCCAGACACCAGAGGGCAGCTTCACCATGGTGATACCCCAGCAGCACAGGAACTGCAGCTTCTCCATCATCTACCCCGTGGAGATCAAGATCGCTGAGCTCAGCCTGGGACACCTCAACGACTTCCCCATCAAGaagTCCATGCCAGGCTGTGCTGGAGCAGGGGACTTTGTGGAGCTGCTGGGAGGGAACGGGATGGACCCGTCTAAGATGTTCCCAGTAGCTGACCTCTGCTACAACTTCAACGGCCCCGCCCAGATGAAGATAGGTTGTGACAACACTGTGGTGAGAATGGTGTCCAGCGGTAGGTTTGTCAACCGGGTGGCGTTCCAATACCGGCTGCTGGACCGGCAGGAGCTGCAGAGGATCAAGGTGAACAGTGTGGAGGATTTCTGCTTCACTGGTTGAGctctccctatctatctctcCACCTCCTATATATACCACCTAGCTAATGGGGACCACCCATCACTGGCTGAGctctccctatctatctctcCACCTCCTATATATATACCACCTAGCTAATGGGGACCACCCATCACTGGCTGCCAAATCTACCATGAGACTGATTACAGAAAGAAATCCTGAGGATCGCCATAACGTTCTGTTCTGTACTCCTTTTTGAATTTAAAGAGattgatttattttttacctcatttgttttttttcttcactatATGTTAAATGAATTGTGGCTGGCGCTCAAGCTTAATAAAGAGTTATTTTGTGTTTGTGGGCAGTTCTGCTATTGGTTTGATTCCGTGTTTATGTTGTCTAAGTTGTGTGATTATATGAATGCCAGTGAAAACAGACCAGTGAGGGTGTTAGCCGGGTGTTTTGGTTCACGTTCTTTACAAGGAAGGGTGTTGAAAAACTGAATGTttctttgtatttattttgtgagACGATGTGTGTCGTTTTGGGACTGTGGCCGGAGGCAAGTGTTCAATAGAGTATGTTTAATACATGTTCATTGCTGTTATCTATATTTATTTGTATCAAACTATTTTTTTGTAATAAAACTGAGCTGCATGGTTAAGCACT

Function

symbol description
crhbp Predicted to enable corticotropin-releasing hormone binding activity. Predicted to be involved in hormone-mediated signaling pathway; negative regulation of corticotropin secretion; and negative regulation of corticotropin-releasing hormone receptor activity. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in brain; neurons; and retina. Human ortholog(s) of this gene implicated in mental depression. Orthologous to human CRHBP (corticotropin releasing hormone binding protein).

NR:

description
corticotropin-releasing factor-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036977079.1 False 1907 mRNA 0.46 7 23370966 23391981
XM_036977080.1 True 1834 mRNA 0.48 7 23386655 23391981

Neighbor

gene id symbol gene type direction distance location
wdr41 wdr41 coding upstream 119378 23237803 ~ 23251588 (+)
LOC110523452 otp coding upstream 156151 23208733 ~ 23214815 (+)
tbca tbca coding upstream 167400 23193874 ~ 23203566 (+)
LOC110523451 ap3b1 coding upstream 212946 23065654 ~ 23158020 (+)
lhfpl2a lhfpl2 coding upstream 363651 22942205 ~ 23007315 (+)
LOC110522829 LOC106567920 coding downstream 29662 23421643 ~ 23422884 (+)
LOC110522830 f2rl2 coding downstream 79007 23470988 ~ 23474212 (+)
LOC110522832 LOC106567816 coding downstream 231940 23623921 ~ 23678038 (+)
vatg1 LOC106567829 coding downstream 317862 23709843 ~ 23711877 (+)
LOC110523463 copt1 coding downstream 321099 23713080 ~ 23735468 (+)
G379282 NA non-coding upstream 10278 23360224 ~ 23360688 (+)
G379279 aggf1 non-coding upstream 14537 23356006 ~ 23356429 (+)
G379273 NA non-coding upstream 19603 23351105 ~ 23351363 (+)
G379263 NA non-coding upstream 40372 23330368 ~ 23330594 (+)
G379202 NA non-coding upstream 166867 23203871 ~ 23204099 (+)
G379333 NA non-coding downstream 64384 23456365 ~ 23512877 (+)
G379350 NA non-coding downstream 84499 23476480 ~ 23515214 (+)
G379356 NA non-coding downstream 98098 23490079 ~ 23492379 (+)
G379392 NA non-coding downstream 168041 23560022 ~ 23567553 (+)
G379395 NA non-coding downstream 174496 23566477 ~ 23586088 (+)
G378868 NA other upstream 741297 22602110 ~ 22629669 (+)
G378832 NA other upstream 864696 22503752 ~ 22506270 (+)
G378660 NA other upstream 1139046 22172535 ~ 22231920 (+)
LOC110523400 LOC106568542 other upstream 2212047 21108129 ~ 21160149 (+)
G380340 NA other downstream 348453 23740434 ~ 23741459 (+)
LOC110523468 vamp5 other downstream 446543 23838502 ~ 23844345 (+)
G381239 NA other downstream 1295758 24687739 ~ 24776429 (+)
G382186 NA other downstream 1833461 25225442 ~ 25225730 (+)

Expression


Co-expression Network