LOC110522830 (f2rl2)


Basic Information

Item Value
gene id LOC110522830
gene name f2rl2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 23470988 ~ 23474212 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110522830
ATGACGTCACAGACGCGACAGGTGCTCCTCTACGGACAGACGGCCCCCTCTGCCCTTACCCCTCCGGCGCTGCGGTTGCTAAGCAATGACACAGCGGCGTATCTTGCCGGCCCTCTGAGCACACGGGTCATACCCTGCATTTACGTGCTGGCTGTTGTCGTGGGGATCCCGGCCAACGTTGCCATCTTGTCTGCCGGGGCCACTAAAGTCAGGACAGTGTCATCAACCATCCTCTACTGCAGCCTGGCCGTCTCcgaccccttcctcctcctctctctcatcttcaaGGCCCACTACCATCTCCACGGCAACCACTGGATGTTCGGCGAGACTGCCTGCCGCGTTGTCACAGTTGTCACGTTGTCACTGTTTCTACGGCAACCTCTACTGCTCGGCCCACACGCTAGCCTGCCTGGCTGTGGTGCACCCCTTCCTCTACAAGAGCCTTCCCAAGATGGCGTGCACCGTTTGGGCCAGTTTGGTTGTGTGGGGGGGTGTTTGGGGCTGCCGTCATACCTAAACTACTGGTCCGTCAGAGCTACCGCCTACCCCAGCTCGGCCTTACCACCTGCCATGATGTACTCCCCCGAGACTACAGCTCCCATGCTCCTCTGCTCTACTACAATATGGGCCTGACAATCCTGGGTCTATTAGTCCCCCTGGTGGCCATGGCTGTGTGTTACACACGGATCGTCCGAGAACTCAACCGCTCGCACCACGACTGGACACTGTATGTCAAGGCCAGCTCACTGGTGTTTGTGATCTTCGTGGCATGTTTCGGCCCCGCCGCGACCCTCCACTTCCTGCATTACATACGCCTGTTGGAGGGCGGAGAGGAGAGCTTCTATGGCTACTTCAAGGTAGCAGTGTGTCTGTGCTGCCTGCATGCCTGGACccgttcctcttcctcctcatgtCTAAATCAGATGTATCTAAACTCTACTTCATGA

Function

symbol description
f2rl2 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within blood coagulation; proteolysis; and thrombin-activated receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human F2RL2 (coagulation factor II thrombin receptor like 2).

NR:

description
LOW QUALITY PROTEIN: proteinase-activated receptor 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110522830 True 950 mRNA 0.58 2 23470988 23474212

Neighbor

gene id symbol gene type direction distance location
LOC110522829 LOC106567920 coding upstream 48104 23421643 ~ 23422884 (+)
LOC110523456 crhbp coding upstream 79007 23370966 ~ 23391981 (+)
wdr41 wdr41 coding upstream 219400 23237803 ~ 23251588 (+)
LOC110523452 otp coding upstream 256173 23208733 ~ 23214815 (+)
tbca tbca coding upstream 267422 23193874 ~ 23203566 (+)
LOC110522832 LOC106567816 coding downstream 149709 23623921 ~ 23678038 (+)
vatg1 LOC106567829 coding downstream 235631 23709843 ~ 23711877 (+)
LOC110523463 copt1 coding downstream 238868 23713080 ~ 23735468 (+)
LOC118964576 NA coding downstream 264492 23737834 ~ 23747312 (+)
LOC110523468 vamp5 coding downstream 364290 23838502 ~ 23844345 (+)
G379282 NA non-coding upstream 110300 23360224 ~ 23360688 (+)
G379279 aggf1 non-coding upstream 114559 23356006 ~ 23356429 (+)
G379273 NA non-coding upstream 119625 23351105 ~ 23351363 (+)
G379263 NA non-coding upstream 140394 23330368 ~ 23330594 (+)
G379202 NA non-coding upstream 266889 23203871 ~ 23204099 (+)
G379350 NA non-coding downstream 2268 23476480 ~ 23515214 (+)
G379356 NA non-coding downstream 15867 23490079 ~ 23492379 (+)
G379392 NA non-coding downstream 85810 23560022 ~ 23567553 (+)
G379395 NA non-coding downstream 92265 23566477 ~ 23586088 (+)
G380258 NA non-coding downstream 130306 23604518 ~ 23604732 (+)
lhfpl2a lhfpl2 other upstream 463701 22942205 ~ 23007315 (+)
G378868 NA other upstream 841319 22602110 ~ 22629669 (+)
G378832 NA other upstream 964718 22503752 ~ 22506270 (+)
G378660 NA other upstream 1239068 22172535 ~ 22231920 (+)
LOC110523400 LOC106568542 other upstream 2312069 21108129 ~ 21160149 (+)
G380340 NA other downstream 266222 23740434 ~ 23741459 (+)
G381239 NA other downstream 1213527 24687739 ~ 24776429 (+)
G382186 NA other downstream 1751230 25225442 ~ 25225730 (+)

Expression


Co-expression Network