LOC110523514 (LOC106566259)



Basic Information


Item Value
gene id LOC110523514
gene name LOC106566259
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 26593074 ~ 26624100 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036977150.1
CCTCGAATCACTTCTTCATTTGCTCTGTGGTTGGTAGTGGCACCATTTCTGGGCAAAGGCTATAGAAACAGGAAGTTGTTACTGGTGATTGGGCCTGCTAATCATCAAACGGACGGTTCCTGGTGGAGGCCCAGAGTCTGCATGTGTAGCGATGtgtgcagagaggaagaggcccCCTACCTGCTACCTGACTCAGACTCTGGTTGTGACCTTCAACTTGCCCCCGGCCCCACCATGTTGAACAATGCCTCCCTGGTCTACATCGTCCTGGAGCTGGTGATCGCCTGCCTGGCCGTGACTGGTAATGTGCTGGTCTGCTGGGCCGTGTGCCTCAACAGCACCCTGCAGAGCATTACGAACTACTTTGTGGTGTCCCTGGCAGTGGCAGACATCGCTGTGGGCTTGCTGGCCATCCCCTTCGCCATCACTATCAGCACAGGCTTCTGCGCCAACTTCCATGGCTGCCTGTTCATTGCCTGCTTCGTGCTGGTGCTCACTCAGAGCTCCATCTTCAGCCTGCTGGCCATCGCTGTGGACCGCTACATTGCCATCAAGAGACCTCTCAGGTATAACAGTCTTGTGACGGCCGGGAGGGCGAAGAGCATCATCGCAGTGTGCTGGGTTCTCACTGTGGGCATCGGCCTTACGCCCATGCTGGGCTGGAACAGGGGTGTCAATGCCACCAACAGTAGCTCATGCCCCGAGGGCATGACAGAGTGCCTGTTTGAGGGTGTGGTGACCCTGCACTACATGGTCTACTTCAACTTCTTTGGCTGTGTGCTGGTGCCTCTGCTGGTCATGCTGGCCATCTATGCCCGCATCTTCATGGCGGCTCGGCGCCAACTGAGGCTGATGGACCTGAAGCTGGCTCACATGCACACCCACGGGACAAGTTCGTCGTCCACGTCTTCCCGCTCCACTCTGCAGAAGGAGGTCCACGCGGCCAAGTCTCTGGCCATTATCATGGGGCTGTTCGCCTTCTGCTGGCTGCCCCTGCACATCATCAACTGCTTCAACCTGTTCTGCCAGGACTGTGGGCGCCCACACATATGGGTGATGAACATTGCCATCATCCTGTCCCACGCCAACTCCGTGGTCAACCCCTTCATCTACGCATACCGCATCCGGGAGTTCCGCCACACCTTCCGCAGGATCCTGCGCCAGCACGTGCTGGGACACCAGGAGTGGAATGGGGGTGACAGAGGGGTGGGCGGCAGCATTAGTGTCATGCGCACCACCACTCGCATCAATATGGTGGATGGATCATGTGGCACCATGATGAACAGTTATGCCCTGGAGCCCAGCCCCAAACTCAGCCCCACTAGGACTCCCATAGGGACCCATAGAGCTGAGAAAGAGGCTTCCTCTACCTTCTGTCAGTGGTCGCCACCACGGTCAGACCCTGCACCAATCAGCTACATCCAAAATGGATACCACAGTGGGGATGCCCCACTGTCGCTTAGTGCGGTTCAAAGTGGGGTTGAGACTAAGAACCTTGGGGGAACAACAGAGGTGATGGAGGTGACAGTGGAAACATCTCATTTGTGCACGTCAGGCCTCTGTCCCCCTCACAAACCAGCTCTAACCACTCAGTAGAACTCATTGAGGTGTCATGATATAGTTATCCCCGTGATGGACAAGTTACTGATACCCCAACGTACATCATCAACTACAAGGGGGAGAAGTGAGGGACCAAACTTAAAGCATGTTCCCTATGCCTGTAAAAAATTGACCTAAATCTTGGAAATGCTTGCACTGAGAAGAAATAGCATTTCTTTCTTTAGGAGGGAGACTCCTTAGCCTGGAAAGGAAACAACAAACTGGTATTAAATTACTTCCAGCCATTAAACTTTTTTCTTTCTTCAAATGATTGTATTTGTGGATCACAAAGCTGTTATTTGTGGACATATTTTGTATACGTCACCTCTGAGGCTTTTTACAGTAGGCTAATAGTCTTTCTAAATTTAAAGATTGATCACATTATAAATGAATGGACTGGTCTAACCTCTTGTATGCTGACAGATTATGTTACAGACAGACCAAAACCATAATGACCCTAACGACTGCGCAACACTTAATGATACAATATCCAGTATTGCTGGTCAACCACTATGCAGTTAATGAAACTACTGTATGTCAGTGTGAAGCTTCTGAAATGTATTCTCTTCCTTTTGTAATGCAGTATTTCAATTCTGTCATATTCTGTTTTCAAAAGCTGGTCCCTTGTTTTTATTGTCAGATGATTAAAAGTCTTAAATAAGCTCTATTATCACTGTGTGTTGTTCTCCCCACCAGTGAGTCCTAGTGGGGAGAGAGTAACATACAGCAAATCACACATCACTAAGATGTGATGATGCTCTAGATGTCCAGTAATTTATATTGAAAGCTGTGATACTGCATCTGATTGGAGAGTAAATTCCAGCATCTTGTGATTGCACGCTcactacaccggccaaacccggacgacgatgggccaattgtgcaccgccctatgggactcccaatcacggccagttg
>XM_021602272.2
ACCACGCGCGCATGGATGAGAGCGCATGATACTGCGTTTTCCTGTCCCAACTTCTGAGCGCATCTCAATAGGAGATATTTTGTTTCTAATGTACACGTTAAAAATTTACAGTCATatcttttttcctttttttttacaatatataattcCTAGACTAACTTCTAACTTTTGAAGATCGGATTATGTGAAGAATATGAAGACGCATGTAGCCTATGGAGAGAATATGTTGAGAATATGTTGTGCATTTGCGTCAGTGGATATCATCTAATATGGCAAGACAAAAGAGGTACTGATCTTCATGTGACAGTTGGTTGGCAACGGTTGGCAACAGCCCCTCCCAGTGTGTAGTGTCCAGCCCCTGAGGTTAGCAACAGAGAACACGATTGGACAGAAGGATTGGAAGAAGGAGAGAACCAAACAACCTTCTGTAGCGTGACAATAGAGTAGAGTGAACCTCGAATCACTTCTTCATTTGCTCTGTGGTTGGTAGTGGCACCATTTCTGGGCAAAGGCTATAGAAACAGGAAGTTGTTACTGGTGATTGGGCCTGCTAATCATCAAACGGACGGTTCCTGGTGGAGGCCCAGAGTCTGCATGTGTAGCGATGtgtgcagagaggaagaggcccCCTACCTGCTACCTGACTCAGACTCTGGTTGTGACCTTCAACTTGCCCCCGGCCCCACCATGTTGAACAATGCCTCCCTGGTCTACATCGTCCTGGAGCTGGTGATCGCCTGCCTGGCCGTGACTGGTAATGTGCTGGTCTGCTGGGCCGTGTGCCTCAACAGCACCCTGCAGAGCATTACGAACTACTTTGTGGTGTCCCTGGCAGTGGCAGACATCGCTGTGGGCTTGCTGGCCATCCCCTTCGCCATCACTATCAGCACAGGCTTCTGCGCCAACTTCCATGGCTGCCTGTTCATTGCCTGCTTCGTGCTGGTGCTCACTCAGAGCTCCATCTTCAGCCTGCTGGCCATCGCTGTGGACCGCTACATTGCCATCAAGAGACCTCTCAGGTATAACAGTCTTGTGACGGCCGGGAGGGCGAAGAGCATCATCGCAGTGTGCTGGGTTCTCACTGTGGGCATCGGCCTTACGCCCATGCTGGGCTGGAACAGGGGTGTCAATGCCACCAACAGTAGCTCATGCCCCGAGGGCATGACAGAGTGCCTGTTTGAGGGTGTGGTGACCCTGCACTACATGGTCTACTTCAACTTCTTTGGCTGTGTGCTGGTGCCTCTGCTGGTCATGCTGGCCATCTATGCCCGCATCTTCATGGCGGCTCGGCGCCAACTGAGGCTGATGGACCTGAAGCTGGCTCACATGCACACCCACGGGACAAGTTCGTCGTCCACGTCTTCCCGCTCCACTCTGCAGAAGGAGGTCCACGCGGCCAAGTCTCTGGCCATTATCATGGGGCTGTTCGCCTTCTGCTGGCTGCCCCTGCACATCATCAACTGCTTCAACCTGTTCTGCCAGGACTGTGGGCGCCCACACATATGGGTGATGAACATTGCCATCATCCTGTCCCACGCCAACTCCGTGGTCAACCCCTTCATCTACGCATACCGCATCCGGGAGTTCCGCCACACCTTCCGCAGGATCCTGCGCCAGCACGTGCTGGGACACCAGGAGTGGAATGGGGGTGACAGAGGGGTGGGCGGCAGCATTAGTGTCATGCGCACCACCACTCGCATCAATATGGTGGATGGATCATGTGGCACCATGATGAACAGTTATGCCCTGGAGCCCAGCCCCAAACTCAGCCCCACTAGGACTCCCATAGGGACCCATAGAGCTGAGAAAGAGGCTTCCTCTACCTTCTGTCAGTGGTCGCCACCACGGTCAGACCCTGCACCAATCAGCTACATCCAAAATGGATACCACAGTGGGGATGCCCCACTGTCGCTTAGTGCGGTTCAAAGTGGGGTTGAGACTAAGAACCTTGGGGGAACAACAGAGGTGATGGAGGTGACAGTGGAAACATCTCATTTGTGCACGTCAGGCCTCTGTCCCCCTCACAAACCAGCTCTAACCACTCAGTAGAACTCATTGAGGTGTCATGATATAGTTATCCCCGTGATGGACAAGTTACTGATACCCCAACGTACATCATCAACTACAAGGGGGAGAAGTGAGGGACCAAACTTAAAGCATGTTCCCTATGCCTGTAAAAAATTGACCTAAATCTTGGAAATGCTTGCACTGAGAAGAAATAGCATTTCTTTCTTTAGGAGGGAGACTCCTTAGCCTGGAAAGGAAACAACAAACTGGTATTAAATTACTTCCAGCCATTAAACTTTTTTCTTTCTTCAAATGATTGTATTTGTGGATCACAAAGCTGTTATTTGTGGACATATTTTGTATACGTCACCTCTGAGGCTTTTTACAGTAGGCTAATAGTCTTTCTAAATTTAAAGATTGATCACATTATAAATGAATGGACTGGTCTAACCTCTTGTATGCTGACAGATTATGTTACAGACAGACCAAAACCATAATGACCCTAACGACTGCGCAACACTTAATGATACAATATCCAGTATTGCTGGTCAACCACTATGCAGTTAATGAAACTACTGTATGTCAGTGTGAAGCTTCTGAAATGTATTCTCTTCCTTTTGTAATGCAGTATTTCAATTCTGTCATATTCTGTTTTCAAAAGCTGGTCCCTTGTTTTTATTGTCAGATGATTAAAAGTCTTAAATAAGCTCTATTATCACTGTGTGTTGTTCTCCCCACCAGTGAGTCCTAGTGGGGAGAGAGTAACATACAGCAAATCACACATCACTAAGATGTGATGATGCTCTAGATGTCCAGTAATTTATATTGAAAGCTGTGATACTGCATCTGATTGGAGAGTAAATTCCAGCATCTTGTGATTGCACGCTcactacaccggccaaacccggacgacgatgggccaattgtgcaccgccctatgggactcccaatcacggccagtt

Function


NR:

description
adenosine receptor A2b-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036977150.1 False 2517 mRNA 0.51 2 26593074 26614373
XM_021602272.2 True 2969 mRNA 0.49 3 26593075 26624100

Neighbor


gene id symbol gene type direction distance location
snrpd3l smd3 coding downstream 18028 26572932 ~ 26575046 (-)
LOC110523513 camkk2 coding downstream 20286 26550406 ~ 26572788 (-)
zgc:113162 LOC106566205 coding downstream 43174 26518130 ~ 26549900 (-)
fut7 LOC106567339 coding downstream 211398 26370618 ~ 26381676 (-)
LOC110523507 LOC106567301 coding downstream 307850 26276691 ~ 26285224 (-)
LOC110523516 LOC106563144 coding upstream 5289 26629389 ~ 26669814 (-)
LOC110523515 LOC106566295 coding upstream 45787 26669887 ~ 26804113 (-)
LOC110523517 LOC106566303 coding upstream 186666 26810766 ~ 26855179 (-)
LOC110523523 ub2g1 coding upstream 271142 26895242 ~ 26898873 (-)
ulk1b NA coding upstream 277677 26901777 ~ 26937060 (-)
G383720 NA non-coding downstream 79650 26513165 ~ 26513424 (-)
G383696 NA non-coding downstream 100846 26459766 ~ 26492228 (-)
G384310 NA non-coding upstream 10509 26634609 ~ 26635077 (-)
G384313 NA non-coding upstream 13769 26637869 ~ 26638485 (-)
G384328 NA non-coding upstream 57596 26681696 ~ 26688381 (-)
G384357 NA non-coding upstream 112698 26736798 ~ 26738785 (-)
G383422 NA other downstream 594294 25996806 ~ 25998780 (-)
LOC110523492 LOC106567536 other downstream 1151280 25437411 ~ 25441794 (-)
G380648 NA other downstream 2831267 23759039 ~ 23761807 (-)
G380610 LOC106567829 other downstream 2881183 23709798 ~ 23711891 (-)
LOC110522831 LOC106563032 other downstream 3036531 23488916 ~ 23556681 (-)
G385617 NA other upstream 1385167 28009267 ~ 28010077 (-)
G385769 NA other upstream 1590443 28214543 ~ 28214819 (-)
G386126 NA other upstream 1727675 28351775 ~ 28354745 (-)
G386222 NA other upstream 1866866 28490966 ~ 28491372 (-)
anapc2 LOC106566731 other upstream 2379583 28994099 ~ 29004755 (-)

Expression


LOC110523514(LOC106566259) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

LOC110523514(LOC106566259) Expression in each Bioproject

Bar chart with 20 bars.
LOC110523514(LOC106566259) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network