Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523522 |
| gene name | arpc3 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 26892472 ~ 26895096 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| arpc3 | Predicted to enable actin binding activity. Predicted to contribute to actin filament binding activity. Predicted to be involved in Arp2/3 complex-mediated actin nucleation. Predicted to act upstream of or within regulation of actin filament polymerization. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be part of Arp2/3 protein complex. Orthologous to human ARPC3 (actin related protein 2/3 complex subunit 3). |
| description |
|---|
| actin-related protein 2/3 complex subunit 3-like |
| id | name | namespace |
|---|---|---|
| GO:0034314 | Arp2/3 complex-mediated actin nucleation | biological_process |
| GO:0005885 | Arp2/3 protein complex | cellular_component |
| id | description |
|---|---|
| K05756 | ARPC3; actin related protein 2/3 complex, subunit 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021602281.2 | True | 1070 | mRNA | 0.44 | 7 | 26892472 | 26895096 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| atpbb | LOC106566318 | coding | upstream | 52 | 26889974 ~ 26892420 (+) |
| LOC110523521 | vps29 | coding | upstream | 4827 | 26884887 ~ 26887645 (+) |
| noc4l | noc4l | coding | upstream | 7880 | 26877516 ~ 26884592 (+) |
| pus1 | pus1 | coding | upstream | 15255 | 26854071 ~ 26877217 (+) |
| LOC110522865 | LOC106567246 | coding | upstream | 390188 | 26437517 ~ 26502284 (+) |
| LOC110523526 | LOC106566370 | coding | downstream | 690509 | 27585605 ~ 27657306 (+) |
| LOC118964580 | LOC108247247 | coding | downstream | 716661 | 27611757 ~ 27613814 (+) |
| LOC110523527 | LOC106567169 | coding | downstream | 764048 | 27659144 ~ 27664034 (+) |
| LOC110522888 | LOC106566402 | coding | downstream | 780266 | 27675352 ~ 27719165 (+) |
| LOC118964522 | NA | coding | downstream | 840782 | 27735878 ~ 27741089 (+) |
| G383936 | NA | non-coding | upstream | 26852 | 26865340 ~ 26865620 (+) |
| G383931 | NA | non-coding | upstream | 33260 | 26858845 ~ 26859212 (+) |
| G383886 | LOC105014832 | non-coding | upstream | 76285 | 26810795 ~ 26816187 (+) |
| G383792 | NA | non-coding | upstream | 231808 | 26658660 ~ 26660664 (+) |
| G383791 | LOC106566282 | non-coding | upstream | 234322 | 26657866 ~ 26658150 (+) |
| G383895 | NA | non-coding | downstream | 6692 | 26901788 ~ 26905762 (+) |
| G383971 | NA | non-coding | downstream | 61492 | 26956588 ~ 26957041 (+) |
| G384003 | NA | non-coding | downstream | 108478 | 27003574 ~ 27004136 (+) |
| G384058 | NA | non-coding | downstream | 185366 | 27080462 ~ 27080702 (+) |
| G384073 | NA | non-coding | downstream | 213704 | 27108800 ~ 27109029 (+) |
| G383794 | LOC106566282 | other | upstream | 228859 | 26661838 ~ 26663613 (+) |
| LOC110523503 | NA | other | upstream | 705782 | 26174884 ~ 26186710 (+) |
| G382186 | NA | other | upstream | 1666742 | 25225442 ~ 25225730 (+) |
| G381239 | NA | other | upstream | 2116043 | 24687739 ~ 24776429 (+) |
| G385053 | NA | other | downstream | 811618 | 27706714 ~ 27707078 (+) |
| G385171 | LOC106566130 | other | downstream | 1009371 | 27904467 ~ 27904731 (+) |
| G385805 | NA | other | downstream | 1521509 | 28416605 ~ 28417555 (+) |
| spag8 | LOC106566715 | other | downstream | 2031181 | 28926263 ~ 28931410 (+) |
