LOC110523527 (LOC106567169)


Basic Information

Item Value
gene id LOC110523527
gene name LOC106567169
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 27659144 ~ 27664034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021602295.2
CCATTTGCAGACCTTATCAAACGTGAAAAAGGTCAATTTACATttgataataacaataacaaacaCTCATGTGTTAGGAGAACGTAGAAATGGCAATTCTGCGTGCTTTTGTAGACTTGACGGTAGAGGGTTTGTTTGCATAGTGTCATTACAGGTTTGCAAAGTGTGCCTAGTTAGACAGCTTTCTCACAACTTGAACTTGACAGCATCTGTAGCTTCTCCTGTTGTaggtaactaacgttagctagctagctatggcaATTGGCCGCGGACAACTTTTCCGCAGTTTCAGAGAGGGTTTGTTGAAGAATGCCCCGCCAACAGAGGGTCAAGGACCGACAGGCAAAGAGAATAGCAGACTCTGCGAGAAAATGACTGGATTTTCCCCGGGCATTCAAAGTGTGGAACCACCAACACTGCCACgaaagaagaagaggaaaaaGAAGGCGGCAAAGGCTACTGTACTCTGTCAGCCAGTTGTACCACTGCCAAGGGTACCTACAAAGTCTACTGGACATGCTGGCAAGCCAGCTGAGTGCACACCGAATCACATAGAGAGGATGCCACCGGAGATCCTTCTGAAGATCCTATCGTACCTggatgccctctctctcttctccatcggCTTCACCAACAAGCGATTCTATGAGATGGCCCACAACAATGGAATGTGGCACAAGATGTATTCTGCAGAGTATGGACACAGTAAGAAGTGGAGGCCCAAGCGTTTGGACGAGGTGCTGGATAAACTGAGTGCGGTGGTGGTCCAGGAGAGACCAGAGGGCTATTGGAGAAGACTGTACTTCAGGACCATGGCTGGCTTCAATGAGACCAAGTGGAGGAAGGAGTTGAGAGACATCAACCCTTTCACAGGCTTGCCCAGTCAGACTGAAAGAATCCTCAGGAGCCAGCGTGTGACCTGGGAGATCACAGTGTCTGACaagtgggggttggaggggacGTTTGAGCAGAGTCGTGCCTACTTCTCTGACTCGTCCGTGACGGTGTGCTGGAGCAGCGGGCGCTGGCCCTCCTTCCACCAGCTCTCTACCTTACAGCTAGATGGTGTCAAAAGACAAGCTCTCAGTTCCCCTAACATCAATAAGCCTGGCTGGCGGTCTCTGATGGCTAAGTTTGACAGGAACACCATCTCTAAGAGTGGCCAGGTCATCGGTAGAGACCAACTAGTCACCCTGGTACTCTTTTCGCCTAGCATCGTCATTGGCGTCTGGAGGGGCAGGTGGTCCATTGCCTTTGTGATGGCCAGCTTCCACTACCACAGGCTGGTGGAGAGGAGTCTTCTGGGCACCTCAATGTGcccctatTCCATGCCAGAGAACAAGCCTCCTTTCGACGACATGGACCCTGACTCCGGCCTCCATGGTTACACGCTCCGCATTATACTACACAACACTGTGACCCAGATCATGGCCGGCCACTTCTCTCAACTCTACTGTAGCAAAAGTCAGGTCCATGGTGGTTTCATCCAGCTGAATGTCATCAACAGGGGAAGCCTGTCCCAGCACACCCCTCTCTCTGGCAGGATCAGCCTGCCCTGGAAGTGTGAGGCTCTAGAGGGCACCGTGGAGaatTGCTGCATGATGAGCCTGACCCTGATGGATGAGTACCAGAACCCCTTCTGGTGTGTCAGCACACCCGTGTGTATGGCACTGAACAGTAAGGAGCCATCCAACGACTACGAGGGTCAGCACTTCCTGATCAAGTACCAGGATACAGAAGGCAAGGTGAGGATGGACCTTGTGTGGCTGGAAGAGCAGAGACAGTACTTCCTCATCAATCTGGTAGTCTTCATCGCCACGGCCAAAGTCAACAAGTACTTTGGGAGAGCCTACTGACGCTGCATGTAGAGGTGGCACTGTACTACAATCCTCTATCCTAAGGCCTTCATAATGATGACAAAGTGGTGACATAAACTGTCATGACAGCTGACAACTGCTTATGACAtctgttatgttgttgttatgcAGTATAATGTAGGCCTTATGATACAAGCTTGAAGTAAAGTGTTGAGCCTGTATACAGTATGTCAATTGATGACATAGTTTAGTTGTGTTTTGTTCTGAGTAAGTTTGAAGTAGTTCAAGTTTGAGGGTTTGCCCCGGCCAGTTTTCATTATTTCtgtatatttatatagttttatGCATTGTTTTGTGAATCATTAGTACACATTGTTAAAATGTAATCCTACTTTTTTTAAGTATGTCTCGCCATATTATAAAGAGCAAAACTACATGTGAAATGTGTTAACAGAGTTGAACTATTTTGGGTTTGTAAACTTTCtgttacagatggactatctgaTTCTGATAAATATTCTGATTTATATA

Function

NR:

description
F-box only protein 15-like

GO: NA

KEGG:

id description
K10298 FBXO15; F-box protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021602295.2 True 2348 mRNA 0.48 12 27659144 27664034

Neighbor

gene id symbol gene type direction distance location
LOC110523526 LOC106566370 coding upstream 1838 27585605 ~ 27657306 (+)
LOC118964580 LOC108247247 coding upstream 45330 27611757 ~ 27613814 (+)
LOC110523522 arpc3 coding upstream 764048 26892472 ~ 26895096 (+)
atpbb LOC106566318 coding upstream 766724 26889974 ~ 26892420 (+)
LOC110523521 vps29 coding upstream 771499 26884887 ~ 26887645 (+)
LOC110522888 LOC106566402 coding downstream 11328 27675352 ~ 27719165 (+)
LOC118964522 NA coding downstream 71844 27735878 ~ 27741089 (+)
LOC110523528 nsma3 coding downstream 318611 27982645 ~ 27994423 (+)
si:ch211-222n4.2 LOC106566406 coding downstream 344039 28008073 ~ 28016052 (+)
LOC110523531 LOC106566436 coding downstream 388587 28052621 ~ 28067973 (+)
G384917 NA non-coding upstream 174588 27484354 ~ 27484556 (+)
G384773 NA non-coding upstream 287797 27370929 ~ 27371347 (+)
G384770 NA non-coding upstream 290451 27368457 ~ 27368693 (+)
G384200 sfswap non-coding upstream 392634 27262252 ~ 27266510 (+)
G384092 NA non-coding upstream 521411 27137530 ~ 27137733 (+)
G385044 NA non-coding downstream 24121 27688155 ~ 27688671 (+)
G385139 NA non-coding downstream 192646 27856680 ~ 27856887 (+)
G385144 NA non-coding downstream 199256 27863290 ~ 27891266 (+)
G385172 LOC106566130 non-coding downstream 241011 27905045 ~ 27905332 (+)
G385182 NA non-coding downstream 256020 27920054 ~ 27920350 (+)
G383794 LOC106566282 other upstream 995531 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1198448 26437517 ~ 26502284 (+)
LOC110523503 NA other upstream 1472454 26174884 ~ 26186710 (+)
G382186 NA other upstream 2433414 25225442 ~ 25225730 (+)
G381239 NA other upstream 2882715 24687739 ~ 24776429 (+)
G385053 NA other downstream 42680 27706714 ~ 27707078 (+)
G385171 LOC106566130 other downstream 240433 27904467 ~ 27904731 (+)
G385805 NA other downstream 752571 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 1262243 28926263 ~ 28931410 (+)

Expression


Co-expression Network