Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964522 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 27735878 ~ 27741089 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051579.1 | True | 879 | mRNA | 0.41 | 3 | 27735878 | 27741089 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522888 | LOC106566402 | coding | upstream | 16713 | 27675352 ~ 27719165 (+) |
| LOC110523527 | LOC106567169 | coding | upstream | 71844 | 27659144 ~ 27664034 (+) |
| LOC110523526 | LOC106566370 | coding | upstream | 78572 | 27585605 ~ 27657306 (+) |
| LOC118964580 | LOC108247247 | coding | upstream | 122064 | 27611757 ~ 27613814 (+) |
| LOC110523522 | arpc3 | coding | upstream | 840782 | 26892472 ~ 26895096 (+) |
| LOC110523528 | nsma3 | coding | downstream | 241556 | 27982645 ~ 27994423 (+) |
| si:ch211-222n4.2 | LOC106566406 | coding | downstream | 266984 | 28008073 ~ 28016052 (+) |
| LOC110523531 | LOC106566436 | coding | downstream | 311532 | 28052621 ~ 28067973 (+) |
| LOC110523534 | LOC106566461 | coding | downstream | 368733 | 28109822 ~ 28112779 (+) |
| ftsj1 | LOC106566467 | coding | downstream | 486924 | 28228013 ~ 28235500 (+) |
| G385044 | NA | non-coding | upstream | 47207 | 27688155 ~ 27688671 (+) |
| G384972 | NA | non-coding | upstream | 56946 | 27548734 ~ 27678932 (+) |
| G384917 | NA | non-coding | upstream | 251322 | 27484354 ~ 27484556 (+) |
| G384773 | NA | non-coding | upstream | 364531 | 27370929 ~ 27371347 (+) |
| G384770 | NA | non-coding | upstream | 367185 | 27368457 ~ 27368693 (+) |
| G385139 | NA | non-coding | downstream | 115591 | 27856680 ~ 27856887 (+) |
| G385144 | NA | non-coding | downstream | 122201 | 27863290 ~ 27891266 (+) |
| G385172 | LOC106566130 | non-coding | downstream | 163956 | 27905045 ~ 27905332 (+) |
| G385182 | NA | non-coding | downstream | 178965 | 27920054 ~ 27920350 (+) |
| G385498 | NA | non-coding | downstream | 219115 | 27960204 ~ 27960582 (+) |
| G385053 | NA | other | upstream | 28800 | 27706714 ~ 27707078 (+) |
| G383794 | LOC106566282 | other | upstream | 1072265 | 26661838 ~ 26663613 (+) |
| LOC110522865 | LOC106567246 | other | upstream | 1275182 | 26437517 ~ 26502284 (+) |
| LOC110523503 | NA | other | upstream | 1549188 | 26174884 ~ 26186710 (+) |
| G385171 | LOC106566130 | other | downstream | 163378 | 27904467 ~ 27904731 (+) |
| G385805 | NA | other | downstream | 675516 | 28416605 ~ 28417555 (+) |
| spag8 | LOC106566715 | other | downstream | 1185188 | 28926263 ~ 28931410 (+) |
| tbx5a | LOC106566939 | other | downstream | 2000711 | 29741800 ~ 29763439 (+) |
| G387516 | NA | other | downstream | 2155897 | 29896986 ~ 29898134 (+) |
