Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523550 |
| gene name | LOC106566624 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 28536287 ~ 28594968 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ephrin-A5-like isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0007509 | mesoderm migration involved in gastrulation | biological_process |
| GO:0001756 | somitogenesis | biological_process |
| GO:0016020 | membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021602342.2 | False | 4822 | mRNA | 0.44 | 5 | 28536287 | 28594967 |
| XM_021602341.2 | True | 4826 | mRNA | 0.44 | 5 | 28536287 | 28594968 |
28,510,000
28,520,000
28,530,000
28,540,000
28,550,000
28,560,000
28,570,000
28,580,000
28,590,000
28,600,000
28,610,000
28,620,000
28,630,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gadd45gb.1 | LOC106566617 | coding | downstream | 57923 | 28476730 ~ 28478364 (-) |
| c7b | c7-1 | coding | downstream | 100930 | 28431046 ~ 28435357 (-) |
| LOC110523544 | LOC106567207 | coding | downstream | 130137 | 28404505 ~ 28406150 (-) |
| ndr1 | ndr1 | coding | downstream | 173384 | 28360479 ~ 28362903 (-) |
| LOC110523536 | LOC106566140 | coding | downstream | 338478 | 28141409 ~ 28197809 (-) |
| LOC110523552 | habp4 | coding | upstream | 64729 | 28659697 ~ 28665724 (-) |
| zo6 | zo6 | coding | upstream | 78011 | 28672979 ~ 28677678 (-) |
| apba1b | LOC106566682 | coding | upstream | 185494 | 28780462 ~ 28792050 (-) |
| LOC110523560 | mch1 | coding | upstream | 320455 | 28915423 ~ 28916044 (-) |
| LOC110523562 | LOC106566722 | coding | upstream | 340601 | 28935569 ~ 28993616 (-) |
| G386228 | NA | non-coding | downstream | 34165 | 28501856 ~ 28502122 (-) |
| G386225 | NA | non-coding | downstream | 39556 | 28496525 ~ 28496731 (-) |
| G386222 | NA | non-coding | downstream | 44915 | 28490966 ~ 28491372 (-) |
| G386209 | NA | non-coding | downstream | 68024 | 28467942 ~ 28468263 (-) |
| G386175 | NA | non-coding | downstream | 118703 | 28416463 ~ 28417584 (-) |
| G386332 | NA | non-coding | upstream | 61325 | 28656293 ~ 28656515 (-) |
| G386335 | NA | non-coding | upstream | 72347 | 28667315 ~ 28668775 (-) |
| G386338 | NA | non-coding | upstream | 74653 | 28669621 ~ 28669999 (-) |
| G386374 | NA | non-coding | upstream | 138626 | 28733594 ~ 28733843 (-) |
| G386389 | NA | non-coding | upstream | 161403 | 28756371 ~ 28770569 (-) |
| G386126 | NA | other | downstream | 181542 | 28351775 ~ 28354745 (-) |
| G385769 | NA | other | downstream | 321468 | 28214543 ~ 28214819 (-) |
| G385617 | NA | other | downstream | 526210 | 28009267 ~ 28010077 (-) |
| G383422 | NA | other | downstream | 2537507 | 25996806 ~ 25998780 (-) |
| anapc2 | LOC106566731 | other | upstream | 408715 | 28994099 ~ 29004755 (-) |
| G386725 | NA | other | upstream | 414270 | 29009238 ~ 29045158 (-) |
| G387064 | NA | other | upstream | 798127 | 29393095 ~ 29394816 (-) |
| G387052 | LOC106566935 | other | upstream | 839637 | 29434605 ~ 29435311 (-) |
| G387321 | LOC100136012 | other | upstream | 1008215 | 29603183 ~ 29644748 (-) |
