pip5k1ba (LOC106566653)


Basic Information

Item Value
gene id pip5k1ba
gene name LOC106566653
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28720277 ~ 28733042 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021602344.2
ggcctaggctacttaAAGGTACGTGACAGTAGGCGGAGAATGGCACGGAAGCACCGAGGATGCTCGCACGTCACTGATTACCACAAGCCTTCAGACGAGCCAGAAACGATGAAGCCTGGTTGCAAAGTTACTTGTCTTTTCATTTAAACACGGCGATAATATTCAAGgatggcaacaacaaccaCTGAAAGTGGAGGAACCAGTGGGTCAAAAGATTACAAAAAGCCCACAGCGGCTGCCCTGAAAGGAGCCATCCAGCTGGGCATTGGGTACGCAGTGGGGAACCTGACATCCAAGCCTGACAGAGATGTACTCATGCAGGACTTCTACATGGTGGAGAGTGTCTTCCTACCCAGTGAGGGGAGCAACATGACACCAGCACACCACTTCCCAGACTTCCGTCTCAAAACCTACGCCCCTCTCGCCTTCCGCTACTTCCgagagctctttggcatcaaagCAGATGACTACCTGTACTCCATCTGTAACGAACCTCTGATTGAGCTGTCCAACCCCGGGGCCAGCAGTTCCTGGTTCTACCTGACCAGCGACGATGAGTTCATCATTAAGACTGTGCAACATAAAGAAGCTGAATTCCTGCAGAAACTCCTTCCTGGTTACTACATGAATCTGAATCAGAACCCGAGGACACTGCTACCTAAGTTCTATGGCCTTTACTGCATCCAGTGTGCCGGGGTCAACATCCGTCTGGTGGTGATGAACAACGTGTTGCCCAGGGCCCTTAAGATGCACTACAAATATGACCTGAAAGGCTCCACCTACAAACGACACGCCTCGCGCAAGGAGCGTGCCAAGTCCTCGCCCACTTTCAAGGACCTGGACTTCCAGGAGATGCTCGAGGGCCTGCACTTTGATGGCGACACGTACAGTGCCTTGATGAAGACTCTGCAGAGGGATTGCAGGGTCCTGGAGAGCTTTAAGATCATGGACTACAGTCTCCTGCTAGGGGTGCATGTTCTGGACAAGAGTCTGGAAAGGGGGGCCAGGGGGGACAGTAAGCGCCTCAACAGCCAGAGGGTCCTCTACTCCACCGCCCTGGAGTCCATCCAAGGGGAAGGCGATGGCAAGGTTGCAGAGCCAGTGGCAGACGATGACACAATGGGTGGAATTCCAGCAAAACACAAAGATGAGAAGTTGTTGATCTTCTTGGGGATCATTGATATCCTACAGTCCTACAGGTTAATTAAGAAAATGGAGCACTCCTGGAAGGCCCTTGTACACGATGGGGACACCGTGTCAGTTCACAGGCCCGGTTTCTATGCAGACAGATTTCTTAATTTCATGGGTGGCACTGTATTCAAAAAGATCCATCCTCTAAGAGGAGCATCCTCTAAGAGGAAGAGGAGCTCCATCCATGCGATGAGGTCAGCCTCCCAAGAGGTGCTGTCCCCCCAaaaggaggagaaggatgagaggaAGGCCCAAAGCATGGAGTGCCTGGACAGACCATTAAGTTCCTCCAAGCACCCTGACCTAGTCACTCTCCCTAAAAGTATAAAGCAGGCtgtttccttctcctcctccgctCTTCAGACTATCAAGAAAGACCTTGAGGAGCACCTGGAGAATAGTGCCTCTTGTATGACTGTGGCCCTGGATGACACTGTCCCCTTTCCCCCTACCCAGGGCAGCCCAGACTCTGTACATGATGTCTACTTGACTGGTGGCAGAAGATGACAAGTCCCATCCAACAGCACCACAAAATAGACGATGACCTCTAAGCATCAACTGCACAACAAATGCTATCATGACAGCACTCCTCTACAAACTGTATTGCCTTTTAATGTTGTGACCTGCACTATGAAGCTGCTTTCTCCTGCTACAGTACACTTTGCTGCTACTGTAACATCAGAGACAGCCCTAAGGTTTTGAGATGGAGACTAAGGCTGTTACaaaggcagcccaattctaatatttttttcactaattggtcttttgaccaatcaggtcAGCTCTGAACAATATCTGATGTGATTGCTCGAAAAACGAATTAGTAGAAAAAATATCAGAGTTGGTCTTTTTGTGTAAACGCAGCCCTTGAGGAGCATGTCAAATCACTTCTATTCATTGCTTCTCTAACAGAGATCTGTATTTGTATGCACATCCATGTGATTATTTTCTATTGACATCACTAATAATATAGTTCAATTCTCTGAGGCTGGATCCCTGGAAGATACATTTCATCAGGTTTTTATTTGAAGCATActaaaaaaaagtatatacatGCACagagacacttttttttttgcagaaatgAAGATAAATAATCTAAAGTAGGACCAGAAAATATTGCATTGGGCAAATGCTTCATTTACATGACATACCTCTGAGTCCTCAAATCAACCCATCAAGTCACTTCACAATCAGTGCAGCAGACCTTGGACACCAGGGGACACAAAGTAGAGGACATACAGGAGTTGCCAATCAATGTTCAATGACTTGGTCAAGATTTTAAAACAATGCCATGGTGAAGGAATACCATCCAAGGCGTATGTCATGTAGCTAACGCTTTGTGAATATACCATATCAATTGTCTTCCTTTCATGATCACACAGTTCATTATATATTTCATGTAGCTGTTGTCCTATTAATGATCAGTCATGATTATACATTTTCTTTGTAAAATTATGTATTTAAGATAATTAAATGTACAGTTGGCCTA
>XM_021602345.2
ggcctaggctacttaAAGGTACGTGACAGTAGGCGGAGAATGGCACGGAAGCACCGAGGATGCTCGCACGTCACTGATTACCACAAGCCTTCAGACGAGCCAGAAACGATGAAGCCTGGTTGCAAAGTTACTTGTCTTTTCATTTAAACACGGCGATAATATTCAAGgatggcaacaacaaccaCTGAAAGTGGAGGAACCAGTGGGTCAAAAGATTACAAAAAGCCCACAGCGGCTGCCCTGAAAGGAGCCATCCAGCTGGGCATTGGGTACGCAGTGGGGAACCTGACATCCAAGCCTGACAGAGATGTACTCATGCAGGACTTCTACATGGTGGAGAGTGTCTTCCTACCCAGTGAGGGGAGCAACATGACACCAGCACACCACTTCCCAGACTTCCGTCTCAAAACCTACGCCCCTCTCGCCTTCCGCTACTTCCgagagctctttggcatcaaagCAGATGACTACCTGTACTCCATCTGTAACGAACCTCTGATTGAGCTGTCCAACCCCGGGGCCAGCAGTTCCTGGTTCTACCTGACCAGCGACGATGAGTTCATCATTAAGACTGTGCAACATAAAGAAGCTGAATTCCTGCAGAAACTCCTTCCTGGTTACTACATGAATCTGAATCAGAACCCGAGGACACTGCTACCTAAGTTCTATGGCCTTTACTGCATCCAGTGTGCCGGGGTCAACATCCGTCTGGTGGTGATGAACAACGTGTTGCCCAGGGCCCTTAAGATGCACTACAAATATGACCTGAAAGGCTCCACCTACAAACGACACGCCTCGCGCAAGGAGCGTGCCAAGTCCTCGCCCACTTTCAAGGACCTGGACTTCCAGGAGATGCTCGAGGGCCTGCACTTTGATGGCGACACGTACAGTGCCTTGATGAAGACTCTGCAGAGGGATTGCAGGGTCCTGGAGAGCTTTAAGATCATGGACTACAGTCTCCTGCTAGGGGTGCATGTTCTGGACAAGAGTCTGGAAAGGGGGGCCAGGGGGGACAGTAAGCGCCTCAACAGCCAGAGGGTCCTCTACTCCACCGCCCTGGAGTCCATCCAAGGGGAAGGCGATGGCAAGGTTGCAGAGCCAGTGGCAGACGATGACACAATGGGTGGAATTCCAGCAAAACACAAAGATGAGAAGTTGTTGATCTTCTTGGGGATCATTGATATCCTACAGTCCTACAGGTTAATTAAGAAAATGGAGCACTCCTGGAAGGCCCTTGTACACGATGGGGACACCGTGTCAGTTCACAGGCCCGGTTTCTATGCAGACAGATTTCTTAATTTCATGGGTGGCACTGTATTCAAAAAGATCCATCCTCTAAGAGGAGCATCCTCTAAGAGGAAGAGGAGCTCCATCCATGCGATGAGGTCAGCCTCCCAAGAGGTGCTGTCCCCCCAaaaggaggagaaggatgagaggaAGGCCCAAAGCATGGAGTGCCTGGACAGACCATTAAGTTCCTCCAAGCACCCTGACCTAGTCACTCTCCCTAAAAGTATAAAGCAGGCtgtttccttctcctcctccgctCTTCAGACTATCAAGAAAGACCTTGAGGAGCACCTGGAGAATAGTGCCTCTTGTATGACTGTGGCCCTGGATGACACTGTCCCCTTTCCCCCTACCCAGGGCAGCCCAGACTCTGTACATGATGTCTACTTGTGAAGACTGGTGGCAGAAGATGACAAGTCCCATCCAACAGCACCACAAAATAGACGATGACCTCTAAGCATCAACTGCACAACAAATGCTATCATGACAGCACTCCTCTACAAACTGTATTGCCTTTTAATGTTGTGACCTGCACTATGAAGCTGCTTTCTCCTGCTACAGTACACTTTGCTGCTACTGTAACATCAGAGACAGCCCTAAGGTTTTGAGATGGAGACTAAGGCTGTTACaaaggcagcccaattctaatatttttttcactaattggtcttttgaccaatcaggtcAGCTCTGAACAATATCTGATGTGATTGCTCGAAAAACGAATTAGTAGAAAAAATATCAGAGTTGGTCTTTTTGTGTAAACGCAGCCCTTGAGGAGCATGTCAAATCACTTCTATTCATTGCTTCTCTAACAGAGATCTGTATTTGTATGCACATCCATGTGATTATTTTCTATTGACATCACTAATAATATAGTTCAATTCTCTGAGGCTGGATCCCTGGAAGATACATTTCATCAGGTTTTTATTTGAAGCATActaaaaaaaagtatatacatGCACagagacacttttttttttgcagaaatgAAGATAAATAATCTAAAGTAGGACCAGAAAATATTGCATTGGGCAAATGCTTCATTTACATGACATACCTCTGAGTCCTCAAATCAACCCATCAAGTCACTTCACAATCAGTGCAGCAGACCTTGGACACCAGGGGACACAAAGTAGAGGACATACAGGAGTTGCCAATCAATGTTCAATGACTTGGTCAAGATTTTAAAACAATGCCATGGTGAAGGAATACCATCCAAGGCGTATGTCATGTAGCTAACGCTTTGTGAATATACCATATCAATTGTCTTCCTTTCATGATCACACAGTTCATTATATATTTCATGTAGCTGTTGTCCTATTAATGATCAGTCATGATTATACATTTTCTTTGTAAAATTATGTATTTAAGATAATTAAATGTACAGTTGGCCTA

Function

NR:

description
phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like isoform X1

GO: NA

KEGG:

id description
K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021602344.2 False 2683 mRNA 0.46 14 28720277 28733042
XM_021602345.2 True 2688 mRNA 0.46 14 28720277 28733042

Neighbor

gene id symbol gene type direction distance location
LOC110523549 LOC106567216 coding upstream 236892 28481432 ~ 28483385 (+)
LOC110522905 LOC106563371 coding upstream 244739 28473547 ~ 28475595 (+)
LOC110523547 ccdc152 coding upstream 253143 28464099 ~ 28467134 (+)
ghr1 ghr1 coding upstream 256328 28439078 ~ 28463949 (+)
rgs7bpb LOC106566593 coding upstream 296330 28418222 ~ 28423947 (+)
LOC110523554 LOC106566671 coding downstream 4419 28737461 ~ 28780731 (+)
LOC110523556 LOC106566689 coding downstream 63406 28796448 ~ 28804711 (+)
smc5 smc5 coding downstream 72184 28805226 ~ 28829428 (+)
zfand5b zfand5b coding downstream 96673 28829715 ~ 28837189 (+)
LOC110523559 LOC106566708 coding downstream 143531 28876573 ~ 28880143 (+)
G386057 NA non-coding upstream 1255 28718802 ~ 28719022 (+)
G386044 NA non-coding upstream 14765 28705178 ~ 28705512 (+)
G386024 NA non-coding upstream 35263 28684742 ~ 28685014 (+)
G386022 NA non-coding upstream 37070 28682750 ~ 28683207 (+)
G386017 NA non-coding upstream 50227 28669715 ~ 28670050 (+)
G386065 NA non-coding downstream 23468 28756510 ~ 28770567 (+)
G386445 NA non-coding downstream 119838 28852880 ~ 28853151 (+)
spag8 LOC106566715 non-coding downstream 194774 28926263 ~ 28931410 (+)
G386537 NA non-coding downstream 228775 28961817 ~ 28965648 (+)
G386568 LOC106566731 non-coding downstream 261103 28994145 ~ 28995123 (+)
G385805 NA other upstream 302722 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 815546 27904467 ~ 27904731 (+)
G385053 NA other upstream 1013199 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 1036884 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 2056664 26661838 ~ 26663613 (+)
tbx5a LOC106566939 other downstream 1008758 29741800 ~ 29763439 (+)
G387516 NA other downstream 1163944 29896986 ~ 29898134 (+)
G388019 NA other downstream 1553909 30286951 ~ 30287824 (+)
G390184 NA other downstream 3227313 31960355 ~ 31960745 (+)

Expression


Co-expression Network