LOC110523572 (zmynd19)


Basic Information

Item Value
gene id LOC110523572
gene name zmynd19
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 29116491 ~ 29121227 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021602377.2
AGGACAATAGATTAAGAACACAAAATATGTAACGCTTTTTTGGATTGGATTGAAGCTTTTCAAAACGGTATTCtcagtggttgaaaaatgtttagCTTCTTCGAACCCTCCCCCAAATCTTGCCTGGCTTTCTTCTACGCCAGCGGTGTGTCACGGAGGTTTGTTAGCCGGTGGGGAGGACCAAATTCGGACATCGATTGACCCTATTTAACCAAACTGGCAACAAAGTACACACTGATTGATGAACAGGACATACCATTGGTGGAGAACTATGCTTTTGAGGCACGCATGGAGGTAGATGCAGATGGCAATGGGGCAAAGATCTTTGCTTATGCCTTCGACATTGGCAAAGGGCGCTGGGCTGGCAGGCCACTGCACGAGCTGCTCTGGGAGAAACACAGAGGAGGCATCGCTCCCAGCTTCCAAGTAGTCCACATAAACTCTGTTACAGTGGATAACCGTCTGGACAACCTGCGACTGGTCCCCCTTGGCTGGAGCCCTAAATCAGAGGAGATCTCCAGCAAGCAAAGAGAGCAGTCGTTGTACTGGCTGGCCATCCAGCAGGTACCAGCTGACCCCGTAGAGGAGCAGTACCTGGAGCTCAGTCGTACCCGCTACTACAATGCTAACGGAGagctggtggaggaggaggagtgctcCTGTACTTACTACGAGTGTCACTACCCGCCCTGCTCGCTCATCGAGAGGAGACTTAGAGAGTTCAACATCTGTGGCCGCTGTCAGGTGGCTCGCTACTGTGGCTCCCAATGCCAGCAGAGGGACTGGCCCGCCCACAAGAAGCAGTGTCGTGAGCGCAAGAGGGTCCTAGCCCTAGAGTCTGAACCTGAGCGATGATCTCTGAATCAATCACCAGAATAGGGGAATGGGGGGGTGGAAATGAAGTGCAAGGGGGGGGAATCTGCTGACAGAGACAAATGACAGAGGACAATGTTGGTTGGTTGAAAGGGTgggaagataaaaaaaaaaaaaaaaaaaaaaactacaaccAGTTCACAGAACTACAAATCTCCATAACTTGCTTTTTTTGGAGAGGGAGGTCCTCCTGGAGCTCTACCTGCTGCTATGAATTTGTATGTTTGAGTAAGAAGAGGTCACATGGATGAAACTGGCTGTGCTTCTTTTGGACTACAATTGATTACAGTTGTCATCAGCTTTCTCCTTACTCCCACCCACCAACCAGTAATGCCGTGTGTACAGGGATATAGGGATGACAGTGCCTGCTGTTCACCTGGTACAATGGACATGGACCTTTTCACTGTACTACTACTCCCTCTTGGACCTTTGGTGCACATACTCAAGACACCTTCCTGTCATGCTCCAAGACCAACATAAAACTGATAGATTTTCCATGCTGTTTCACGCTAGCAGTATTGTGTGTGCTGCCATTATGGACTGAAGGATATAGATGAAGTGGTGAACATTTGGGGGGGAGGTTCTTTTGTtctgtgtattattattattttttgatggTGGAAAGGGGTTAGTGATTTTTGGACTTGATCACATTGTTACTTTCCTGTGTTGAACATCCCTGAATGAATCTCTCTCAATGCGATCTGTTCGGTTTCCCTTCCAGAAGCTCACACCCAGTCCCTGTCGCTAATGTTTGAGGGATGTCCTGGGAACAACTTAAACCCAGGTTGGCCATTGGACAGGCTACGTTGGGATTGTATGAAATGGCCcgaatatgttttgttttctacaCATCAGTCATTAAAAAGATCTGTTCTATGTCCAAGTGATCGTAgatgaaataatacattttccaGATCACCACCTCAGTGTACTATTGATGCATACCTGCTCAAAGTTTGTCTTCCTGTAACCTTGCTCCCATGCTATTCCACACAGTGAATATAAGCCTGGTACATCAATGATTCAAAGTTGGCTTTTTAGTGGTAGTGACCATAGCATTTTATGGGAGTGAACTTACTGAGTAAAGTATTTGTAGCTTAATTTTAGCTAGTCGTGTGACTCTGTGCTTGGGGTGTGCTGGCATACAGGGTAGAATTAGGGGAAGGTGTTGTGGGAGATGATTGGTAAATTAACCCAATGCGTATGCGCCGGGAGTTTCTCTTGGTTTTTCTGTGTTGGCTGGAGAAGTTTGAACCGTTGGTCTACCAGGCTCTTCGCATTTGGGCAGAAGTGTCTGGGAATGAGATTTAGGTGCTTTCAAGATAACTGGGAATTCAGAAATAACccaggtcaaatcatgacgttgGGGATCTTTAGGTCGGAAAGTCTGAGCTCGAGAAAGATGCCAGCTTACAACATGGAATTCTGAGTTCAATGACCATTAAAAATTACTTTCCCAGTCGGGGATAGTTTTTTCCTGACTTcgcagttgtcttgaatgcactgaagtcggaagtctgagatttcccagttgttttgaatgtggcaTTAGTCTTCCTGTTTTCTTTTAAGTTGATGAATCTTGACAAACATTCACAGATCTAGCATGTAACAAGCAGACAGATGTAATACATGCAACACATTGATTGTTAGTTATGTAGACCGGTTTATAACACTGCACTGAGTTGTTTAAACATACCCCACTGTTATATTTTTTTCAGAGGAAGGGAGAGTTTGGACCATTgggtgtctttaaaaaaaaaaaaagtttaaatggTAAAGGAAAAAGCATGAATCAGAATAAAGACTAAAGTTGGGGATAACtgtaaaatgaaataaaatgtttCACCATG
>XM_021602376.2
GACAATAGATTAAGAACACAAAATATGTAACGCTTTTTTGGATTGGATTGAAGCTTTTCAAAACGGTATTCtcagtggttgaaaaatgtttagCTTCTTCGAACCCTCCCCCAAATCTTGCCTGGCTTTCTTCTACGCCAGCGGTGTGTCACGGAGGTTTGTTAGCCGGTGGGGAGGACCAAATTCGGACATCGATTGACCCTATTTAACCAAACTGGCAGTAAGTCGGGTCTGGGGGGTCGCCCTGACGACTTTTACACGAGTAGATCGCCTCACCTGTTCTTACATTTCGCCCCTTGATCGACCGCTCTTCCAATGTCGGATTTCAAGCTCGGGATTGTTCGACTTGGCCGTGTGGCCGGGAAGACAAAGTACACACTGATTGATGAACAGGACATACCATTGGTGGAGAACTATGCTTTTGAGGCACGCATGGAGGTAGATGCAGATGGCAATGGGGCAAAGATCTTTGCTTATGCCTTCGACATTGGCAAAGGGCGCTGGGCTGGCAGGCCACTGCACGAGCTGCTCTGGGAGAAACACAGAGGAGGCATCGCTCCCAGCTTCCAAGTAGTCCACATAAACTCTGTTACAGTGGATAACCGTCTGGACAACCTGCGACTGGTCCCCCTTGGCTGGAGCCCTAAATCAGAGGAGATCTCCAGCAAGCAAAGAGAGCAGTCGTTGTACTGGCTGGCCATCCAGCAGGTACCAGCTGACCCCGTAGAGGAGCAGTACCTGGAGCTCAGTCGTACCCGCTACTACAATGCTAACGGAGagctggtggaggaggaggagtgctcCTGTACTTACTACGAGTGTCACTACCCGCCCTGCTCGCTCATCGAGAGGAGACTTAGAGAGTTCAACATCTGTGGCCGCTGTCAGGTGGCTCGCTACTGTGGCTCCCAATGCCAGCAGAGGGACTGGCCCGCCCACAAGAAGCAGTGTCGTGAGCGCAAGAGGGTCCTAGCCCTAGAGTCTGAACCTGAGCGATGATCTCTGAATCAATCACCAGAATAGGGGAATGGGGGGGTGGAAATGAAGTGCAAGGGGGGGGAATCTGCTGACAGAGACAAATGACAGAGGACAATGTTGGTTGGTTGAAAGGGTgggaagataaaaaaaaaaaaaaaaaaaaaaactacaaccAGTTCACAGAACTACAAATCTCCATAACTTGCTTTTTTTGGAGAGGGAGGTCCTCCTGGAGCTCTACCTGCTGCTATGAATTTGTATGTTTGAGTAAGAAGAGGTCACATGGATGAAACTGGCTGTGCTTCTTTTGGACTACAATTGATTACAGTTGTCATCAGCTTTCTCCTTACTCCCACCCACCAACCAGTAATGCCGTGTGTACAGGGATATAGGGATGACAGTGCCTGCTGTTCACCTGGTACAATGGACATGGACCTTTTCACTGTACTACTACTCCCTCTTGGACCTTTGGTGCACATACTCAAGACACCTTCCTGTCATGCTCCAAGACCAACATAAAACTGATAGATTTTCCATGCTGTTTCACGCTAGCAGTATTGTGTGTGCTGCCATTATGGACTGAAGGATATAGATGAAGTGGTGAACATTTGGGGGGGAGGTTCTTTTGTtctgtgtattattattattttttgatggTGGAAAGGGGTTAGTGATTTTTGGACTTGATCACATTGTTACTTTCCTGTGTTGAACATCCCTGAATGAATCTCTCTCAATGCGATCTGTTCGGTTTCCCTTCCAGAAGCTCACACCCAGTCCCTGTCGCTAATGTTTGAGGGATGTCCTGGGAACAACTTAAACCCAGGTTGGCCATTGGACAGGCTACGTTGGGATTGTATGAAATGGCCcgaatatgttttgttttctacaCATCAGTCATTAAAAAGATCTGTTCTATGTCCAAGTGATCGTAgatgaaataatacattttccaGATCACCACCTCAGTGTACTATTGATGCATACCTGCTCAAAGTTTGTCTTCCTGTAACCTTGCTCCCATGCTATTCCACACAGTGAATATAAGCCTGGTACATCAATGATTCAAAGTTGGCTTTTTAGTGGTAGTGACCATAGCATTTTATGGGAGTGAACTTACTGAGTAAAGTATTTGTAGCTTAATTTTAGCTAGTCGTGTGACTCTGTGCTTGGGGTGTGCTGGCATACAGGGTAGAATTAGGGGAAGGTGTTGTGGGAGATGATTGGTAAATTAACCCAATGCGTATGCGCCGGGAGTTTCTCTTGGTTTTTCTGTGTTGGCTGGAGAAGTTTGAACCGTTGGTCTACCAGGCTCTTCGCATTTGGGCAGAAGTGTCTGGGAATGAGATTTAGGTGCTTTCAAGATAACTGGGAATTCAGAAATAACccaggtcaaatcatgacgttgGGGATCTTTAGGTCGGAAAGTCTGAGCTCGAGAAAGATGCCAGCTTACAACATGGAATTCTGAGTTCAATGACCATTAAAAATTACTTTCCCAGTCGGGGATAGTTTTTTCCTGACTTcgcagttgtcttgaatgcactgaagtcggaagtctgagatttcccagttgttttgaatgtggcaTTAGTCTTCCTGTTTTCTTTTAAGTTGATGAATCTTGACAAACATTCACAGATCTAGCATGTAACAAGCAGACAGATGTAATACATGCAACACATTGATTGTTAGTTATGTAGACCGGTTTATAACACTGCACTGAGTTGTTTAAACATACCCCACTGTTATATTTTTTTCAGAGGAAGGGAGAGTTTGGACCATTgggtgtctttaaaaaaaaaaaaagtttaaatggTAAAGGAAAAAGCATGAATCAGAATAAAGACTAAAGTTGGGGATAACtgtaaaatgaaataaaatgtttCACCATG

Function

symbol description
zmynd19 Predicted to enable metal ion binding activity. Orthologous to human ZMYND19 (zinc finger MYND-type containing 19).

NR:

description
hypothetical protein cypCar_00004952, partial

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K24632 ZMYND19; zinc finger MYND domain-containing protein 19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021602377.2 False 2729 mRNA 0.45 6 29116491 29121227
XM_021602376.2 True 2873 mRNA 0.45 6 29116493 29121227

Neighbor

gene id symbol gene type direction distance location
coq4 coq4 coding upstream 19149 29089525 ~ 29097342 (+)
LOC110522906 LOC106563306 coding upstream 49368 29061275 ~ 29067123 (+)
alad hem2 coding upstream 60549 29045103 ~ 29055942 (+)
ssna1 ssna1 coding upstream 107381 29004767 ~ 29009110 (+)
spag8 LOC106566715 coding upstream 185081 28926263 ~ 28931410 (+)
tmem141 tmem141 coding downstream 12617 29133844 ~ 29135483 (+)
LOC110523574 LOC106566787 coding downstream 19606 29140833 ~ 29166510 (+)
LOC110523576 LOC106563296 coding downstream 53092 29174319 ~ 29187968 (+)
LOC110523578 LOC106566868 coding downstream 133411 29254638 ~ 29262641 (+)
mtfp1 LOC106566934 coding downstream 183110 29304337 ~ 29312328 (+)
G386606 NA non-coding upstream 43328 29070812 ~ 29073163 (+)
G386568 LOC106566731 non-coding upstream 121368 28994145 ~ 28995123 (+)
G386537 NA non-coding upstream 150843 28961817 ~ 28965648 (+)
G386445 NA non-coding upstream 263340 28852880 ~ 28853151 (+)
G386814 NA non-coding downstream 75660 29196887 ~ 29197098 (+)
G386815 NA non-coding downstream 75904 29197131 ~ 29197363 (+)
G386846 NA non-coding downstream 155574 29276801 ~ 29277657 (+)
G386918 NA non-coding downstream 173951 29295178 ~ 29295389 (+)
G385805 NA other upstream 698936 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 1211760 27904467 ~ 27904731 (+)
G385053 NA other upstream 1409413 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 1433098 27675352 ~ 27719165 (+)
tbx5a LOC106566939 other downstream 620573 29741800 ~ 29763439 (+)
G387516 NA other downstream 775759 29896986 ~ 29898134 (+)
G388019 NA other downstream 1165724 30286951 ~ 30287824 (+)
G390184 NA other downstream 2839128 31960355 ~ 31960745 (+)
G390393 NA other downstream 3098954 32220181 ~ 32220533 (+)

Expression


Co-expression Network