ggt1b (ggt1)


Basic Information

Item Value
gene id ggt1b
gene name ggt1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 36808011 ~ 36822705 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021602660.2
AATGGCATTGTAATAGTTACACATTGAGAGCTATTGCCTACATGGTGCTATGTACTGCTCAAACTTGCTCAGAGGACTGTGAGAAACCCACTGGCAACCAGTCTGTTCCAGAGGCCTGAGAGACACCAAGAAAGATGGTCCATAAGTCCATAGTGGTGGGTCTGGTTGTGCTGCTGGTGGCTGCCGTGAGCACCTTCGTGGGTGTGTTCTTTGGGCTGGGGAGCAGGTCGACCTCAAATGACCATTCCTACTCCAGGGCTGCTGTGGCAACTGATGCTGGCCCATGCTCAGAAATCGGCAGAGACACATTGCAAAAAGGTGGCTCTGCAGTGGATGCATCTATTGCTGCCTTGCTGTGTGTTGGGCTGATGAACGCCCACAGCATGGGCATTGGTGGAGGACTCTTCTTCACTATCTATGATGCCAAAACTGGAAAGGTAGAGACCATTGATTCCAGGGAGACGGCTCCCGCCACCGCGACAGAGGACATGTTTGGGAATAGCACTCAGTTAGCCAAGAAAGGAGGGTTGTCCATCGCCATACCAGGGGAGATCCGTGGGTACGAGCTGGCACACGATCGCCATGGAAAATTGCCATGGAGAGAGCTGTTCCAGCCTGCAATCCAGTTGGCACGGAAGGGCTTTCCTTTGGGCAGGGCATTGGCCACTGCTATCTCCAAGAACAGAAAAACCATCACTAGTGACACAGCTTTATGTGAGGTGTTTTGTGACAAAAATGGTGTCATCCTGAAGGAAAACGACACCATCACCTTTACTAAACTTGCTGACACCTATGAAACAATAGCAAATGAGGGGCCTAATGCTTTTTACGAAGGCCCACTGGCAGAGAACCTTGTGAGGGACATTCAGTCAGCAGATGGTATCATCACACTGGATGACCTAAAGAACTACAAGCCTTTTTTGGATGAGCGTCCTCTCAATTCTAATGTGGGGGAGTACATCATGTATGTGCCCAACGCCCCAGCCAGTGGCCCTGTCCTGTCCCTCATGCTCAACATCCTGGATGGATACAACTTCACCTCAGACAGTGTCTCCAGCACTGAGAAGAAGATCCTCACGTACCACCGCATGGTTGAGGCCTTCCGATTTGCTTACGCCAAGCGAAGCATGCTGGGAGATCCAAACTTCCTCAGCATCTCTGATCTCATCCGCAACATGACCTCAGATTACTTTGCCGATGCCCTCCGTCAGAAGATCACAGATGATACCACCCATCACATGAACTACTATGAGCCAGACTACTTTGTCCCCGAGAACCACGGGACAgcacatctgtctgtggtggcaGAGGACGGGAGTGCAGTGGCAGCCACCAGCACCATCAATCAATTTTTTGGCTCCAAAGTCATGTCACAATCTACAGGAATCCTCCTCAACAATGAGATGGATGACTTCAGCTCCCCTCTCATCACCAATGGCTTTGGAGTGCCTCCTTCACCAAACAACTTCATCAGACCAGGTAAGAGGCCCTTGTCTTCTATGTGTCCAGCCATTCTCTTTGACAAGAGGAACAACAATGTCAAGATGGTGGTGGGGGGCTCAGGAGGAACAAAGATCACCACGGCAACTGCCACGGTGATTCTCAACACGCTGTTCTTTAACTACGACCTGAAGAAAGCTGTGGCAGATCCTAGAATCCACAACCAGCTGAGTCCTAACACTACACTGGGAGAGCCCGGGTTTGACGAGATGGTGATGGCAGGTCTGGCTTTGAAGAACCATGAGACAGAGTTCCTGACAGCCACAGGGGCTGTGGTTCAGGCAGTGCTGCGCCAGGGAGACCAGCTCCAAGCTGAATCCGACCCCAGGAAATGGGGCTACGCTGCTGGGTACTGAGACCAACCACAGACCCCTGCTCCCACGAACTGAGGCAAACCACACACCTCTGCTCTCACAGACAGGCTGGCTGATTGGGCTTATGATTCAGATGAAAGCCACATCTACAATAAGGCTGTGAcaataccagtatcgcaatattttttccatggcaaaaatgaataCACGAAGCAGATctctctttggtcctttaaaaacctgctgtactgtatgtaaaatattgtgtgctgtaGATAGAAAACATATACATcggactctggatgacaacataatgatatttgtttccaacattagggctgttttcctgatGAAGTTAATCCGCTTCGCGATATTGGTATCGTCCTGGCCCTACTCTATAGACTATATTACAAACCAAGAGAAAAACGTTCAGATTCCTGTCATCTCAGCAAAGACCTACGACCTACAGTATGACCTTAGTCCTCTCTGGTAAGCCAGGGTCACCTTTCTCCCCTCATTGGTGTCATTAGAAAGTGGAGAGAAGCTACCCTCCAACGTCTCCTATCCCTCCAGTGCCTCAGTCTGAGATCCAGATCCTGAGATAGAGCTATTCATTCTCCACAGTCCTCCTCCACTCTGCGGTACTATCTGTACCATCTCAATATTTCTTAGTAACTGTGCCAACACTATATCAATGTTTTTCTTTCACTGCAATCTTTCATGGATTTTCAGTCAGGATTTTCATTTTGAGATAATAGATGATTATAATCACGGTTTGCCTTAAACCAAATGTTATATtctgtaaaataaatatatatatattatttgtgtTGCTTTTGAGAAGACATGTTATTGGTTCAAGATTAATAATTCACAAGCCATACCCATATAACAGTTTTATGATGTAATGTTAACAAGACTGCAACAATCTTATAAGCATTGACCAACAATGAAAACACAGGAAGACAGAAACAAAGTTTAAAATAATAACAGAGGGCTTACTTCATGGTTCAATTGTT

Function

symbol description
ggt1 Enables glutathione hydrolase activity; leukotriene-C(4) hydrolase; and peptidyltransferase activity. Involved in carboxylic acid metabolic process; glutathione catabolic process; and zymogen activation. Located in plasma membrane. Implicated in gamma-glutamyl transpeptidase deficiency. Biomarker of several diseases, including biliary atresia; diabetes mellitus (multiple); diabetic neuropathy; fatty liver disease (multiple); and liver disease (multiple).

NR:

description
gamma-glutamyltranspeptidase 1-like

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0003840 obsolete gamma-glutamyltransferase activity molecular_function

KEGG:

id description
K18592 GGT1_5, CD224; gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021602660.2 True 2833 mRNA 0.47 13 36808011 36822705
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110522925 LOC106568232 coding downstream 28605 36759162 ~ 36779406 (-)
LOC110523717 LOC106563338 coding downstream 89314 36706443 ~ 36718697 (-)
rab11fip1b LOC106564684 coding downstream 122685 36658229 ~ 36685326 (-)
brf2 brf2 coding downstream 149998 36655218 ~ 36658013 (-)
LOC110523706 NA coding downstream 200960 36577628 ~ 36607051 (-)
LOC110522926 kdm2b coding upstream 135283 36957988 ~ 37014007 (-)
morn3 morn3 coding upstream 209916 37032621 ~ 37040613 (-)
rhof rhof coding upstream 229975 37052680 ~ 37061075 (-)
car15 LOC106565810 coding upstream 261840 37083439 ~ 37090828 (-)
dgcr2 LOC106564385 coding upstream 269631 37092336 ~ 37108017 (-)
G396254 NA non-coding downstream 74442 36727011 ~ 36733569 (-)
G396253 NA non-coding downstream 76755 36724403 ~ 36731256 (-)
G395873 NA non-coding downstream 83938 36723814 ~ 36724073 (-)
G395818 NA non-coding downstream 184195 36623608 ~ 36623816 (-)
G395815 NA non-coding downstream 188507 36618905 ~ 36619504 (-)
G396341 NA non-coding upstream 39920 36862625 ~ 36862966 (-)
G396342 NA non-coding upstream 40731 36863436 ~ 36864413 (-)
G396343 NA non-coding upstream 42219 36864924 ~ 36865130 (-)
G396349 NA non-coding upstream 52861 36875566 ~ 36875776 (-)
G395600 NA other downstream 360560 36446978 ~ 36447451 (-)
G395546 NA other downstream 393096 36414122 ~ 36414915 (-)
G395525 NA other downstream 506019 36301466 ~ 36301992 (-)
LOC110523683 NA other downstream 888724 35907698 ~ 35929154 (-)
G395297 NA other downstream 954654 35852790 ~ 35853357 (-)
G396446 setd1b other upstream 248301 37071006 ~ 37072124 (-)
G397094 NA other upstream 781091 37603796 ~ 37606041 (-)
G397378 NA other upstream 1243570 38066275 ~ 38069974 (-)
G397500 cssa01h5orf42 other upstream 1402276 38224981 ~ 38225520 (-)
G398487 NA other upstream 2301780 39124485 ~ 39125159 (-)

Expression

ggt1b(ggt1) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 150.
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ggt1b(ggt1) Expression in each Bioproject

Bar chart with 20 bars.
ggt1b(ggt1) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6000.
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Co-expression Network