Gene
RNA
| Item | Value |
|---|---|
| gene id | dgcr2 |
| gene name | LOC106564385 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 37092336 ~ 37108017 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| integral membrane protein DGCR2/IDD-like isoform X5 |
| id | name | namespace |
|---|---|---|
| GO:0030246 | carbohydrate binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021602682.2 | False | 4220 | mRNA | 0.46 | 10 | 37092336 | 37108008 |
| XM_036977420.1 | False | 4336 | mRNA | 0.46 | 12 | 37092336 | 37108009 |
| XM_036977421.1 | False | 4303 | mRNA | 0.46 | 11 | 37092336 | 37108009 |
| XM_036977422.1 | False | 4098 | mRNA | 0.46 | 9 | 37092336 | 37108009 |
| XM_021602679.2 | False | 4262 | mRNA | 0.46 | 11 | 37092336 | 37108017 |
| XM_021602680.2 | False | 4259 | mRNA | 0.46 | 11 | 37092336 | 37108017 |
| XM_021602683.2 | False | 4217 | mRNA | 0.46 | 11 | 37092336 | 37108017 |
| XM_021602684.2 | True | 4214 | mRNA | 0.46 | 11 | 37092336 | 37108017 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| car15 | LOC106565810 | coding | downstream | 1508 | 37083439 ~ 37090828 (-) |
| rhof | rhof | coding | downstream | 31261 | 37052680 ~ 37061075 (-) |
| morn3 | morn3 | coding | downstream | 51723 | 37032621 ~ 37040613 (-) |
| LOC110522926 | kdm2b | coding | downstream | 78329 | 36957988 ~ 37014007 (-) |
| ggt1b | ggt1 | coding | downstream | 269631 | 36808011 ~ 36822705 (-) |
| LOC110523738 | LOC106564444 | coding | upstream | 2260 | 37110277 ~ 37116619 (-) |
| rnf185 | LOC106564501 | coding | upstream | 29594 | 37137611 ~ 37140037 (-) |
| LOC100136107 | LOC100136107 | coding | upstream | 38320 | 37146337 ~ 37147881 (-) |
| tmem119b | LOC106564485 | coding | upstream | 53523 | 37161540 ~ 37166164 (-) |
| cor1c | cor1c | coding | upstream | 83165 | 37191182 ~ 37200975 (-) |
| G396459 | NA | non-coding | downstream | 466 | 37091657 ~ 37091870 (-) |
| G396445 | setd1b | non-coding | downstream | 13698 | 37078230 ~ 37078638 (-) |
| G396444 | setd1b | non-coding | downstream | 14468 | 37077607 ~ 37077868 (-) |
| G396449 | setd1b | non-coding | downstream | 15630 | 37075992 ~ 37076706 (-) |
| G396468 | NA | non-coding | upstream | 20999 | 37129016 ~ 37129344 (-) |
| G396470 | NA | non-coding | upstream | 23438 | 37131455 ~ 37131781 (-) |
| G396451 | NA | non-coding | upstream | 25640 | 37133657 ~ 37135503 (-) |
| G396484 | NA | non-coding | upstream | 46018 | 37154035 ~ 37154327 (-) |
| G396487 | NA | non-coding | upstream | 49664 | 37157681 ~ 37158013 (-) |
| G396446 | setd1b | other | downstream | 20212 | 37071006 ~ 37072124 (-) |
| G395600 | NA | other | downstream | 644885 | 36446978 ~ 36447451 (-) |
| G395546 | NA | other | downstream | 677421 | 36414122 ~ 36414915 (-) |
| G395525 | NA | other | downstream | 790344 | 36301466 ~ 36301992 (-) |
| LOC110523683 | NA | other | downstream | 1173049 | 35907698 ~ 35929154 (-) |
| G397094 | NA | other | upstream | 495779 | 37603796 ~ 37606041 (-) |
| G397378 | NA | other | upstream | 958258 | 38066275 ~ 38069974 (-) |
| G397500 | cssa01h5orf42 | other | upstream | 1116964 | 38224981 ~ 38225520 (-) |
| G398487 | NA | other | upstream | 2016468 | 39124485 ~ 39125159 (-) |
| LOC110522860 | LOC106565786 | other | upstream | 2018518 | 39125473 ~ 39129083 (-) |
