Gene
RNA
| Item | Value |
|---|---|
| gene id | bmpr1bb |
| gene name | LOC106564072 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 38569703 ~ 38681169 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| bone morphogenetic protein receptor type-1B-like |
| id | description |
|---|---|
| K13578 | BMPR1B, ALK6, CDw293; bone morphogenetic protein receptor type-1B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036977450.1 | False | 3728 | mRNA | 0.50 | 15 | 38569703 | 38681169 |
| XM_036977451.1 | False | 3655 | mRNA | 0.50 | 14 | 38569703 | 38681169 |
| XM_036977452.1 | True | 3647 | mRNA | 0.50 | 14 | 38569709 | 38681169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdlim5b | LOC106564051 | coding | upstream | 549 | 38496984 ~ 38569154 (+) |
| opn4xa | opn4x1b2 | coding | upstream | 89019 | 38436446 ~ 38480684 (+) |
| LOC110523766 | LOC106564097 | coding | upstream | 181606 | 38361166 ~ 38388097 (+) |
| LOC110523763 | wdr70 | coding | upstream | 253413 | 38230285 ~ 38316290 (+) |
| cplane1 | cssa01h5orf42 | coding | upstream | 339536 | 38200514 ~ 38230167 (+) |
| glis3 | LOC106564006 | coding | downstream | 292269 | 38973438 ~ 39005816 (+) |
| rfx3 | LOC106563985 | coding | downstream | 326878 | 39008047 ~ 39067301 (+) |
| LOC110522932 | LOC106563304 | coding | downstream | 509296 | 39190465 ~ 39191487 (+) |
| LOC110523777 | LOC106563114 | coding | downstream | 616773 | 39297942 ~ 39317727 (+) |
| LOC110523778 | NA | coding | downstream | 642472 | 39323641 ~ 39327183 (+) |
| G397634 | NA | non-coding | upstream | 84391 | 38481503 ~ 38485312 (+) |
| G397652 | NA | non-coding | upstream | 125209 | 38444198 ~ 38444494 (+) |
| G397649 | NA | non-coding | upstream | 130144 | 38438430 ~ 38439559 (+) |
| G397647 | NA | non-coding | upstream | 133364 | 38436137 ~ 38436339 (+) |
| G397644 | NA | non-coding | upstream | 136780 | 38432287 ~ 38432923 (+) |
| G397839 | NA | non-coding | downstream | 111618 | 38792787 ~ 38795861 (+) |
| G397937 | NA | non-coding | downstream | 271683 | 38952852 ~ 38953128 (+) |
| G397939 | NA | non-coding | downstream | 273519 | 38954688 ~ 38955060 (+) |
| G397940 | NA | non-coding | downstream | 274709 | 38955878 ~ 38956114 (+) |
| G397943 | NA | non-coding | downstream | 279996 | 38961165 ~ 38961460 (+) |
| srsf9 | sfrs9 | other | upstream | 648467 | 37917781 ~ 37921282 (+) |
| m17 | m17 | other | upstream | 1158804 | 37409195 ~ 37411565 (+) |
| G396022 | kdm2b | other | upstream | 1604051 | 36965084 ~ 36965652 (+) |
| G395034 | NA | other | upstream | 2268413 | 36280300 ~ 36301290 (+) |
| G395005 | LOC106564805 | other | upstream | 2363087 | 36202901 ~ 36206616 (+) |
| G399169 | gpat3 | other | downstream | 1080947 | 39762116 ~ 39765843 (+) |
| G399919 | NA | other | downstream | 1760586 | 40441755 ~ 40442086 (+) |
| G400154 | NA | other | downstream | 2183760 | 40864929 ~ 40881126 (+) |
| G400267 | LOC106561151 | other | downstream | 2424355 | 41105524 ~ 41106754 (+) |
