Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110522934 |
| gene name | LOC106563829 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 39341016 ~ 39345858 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: S-phase kinase-associated protein 2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110522934 | True | 1258 | mRNA | 0.51 | 10 | 39341016 | 39345858 |
39,335,000
39,336,000
39,337,000
39,338,000
39,339,000
39,340,000
39,341,000
39,342,000
39,343,000
39,344,000
39,345,000
39,346,000
39,347,000
39,348,000
NC_048569.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523776 | LOC106563909 | coding | downstream | 60323 | 39269399 ~ 39280693 (-) |
| LOC110523775 | LOC106563887 | coding | downstream | 75498 | 39214934 ~ 39265518 (-) |
| LOC110523774 | LOC106563918 | coding | downstream | 127128 | 39194711 ~ 39213888 (-) |
| zdhhc8a | LOC106563940 | coding | downstream | 151286 | 39171107 ~ 39189730 (-) |
| LOC110523772 | LOC105025166 | coding | downstream | 174203 | 39148565 ~ 39166813 (-) |
| trnal-uaa-2 | NA | coding | upstream | 119271 | 39465129 ~ 39465199 (-) |
| capslb | LOC106563770 | coding | upstream | 176465 | 39522323 ~ 39525554 (-) |
| lmbrd2b | LOC106563747 | coding | upstream | 184124 | 39529982 ~ 39549797 (-) |
| LOC110523784 | LOC106609062 | coding | upstream | 209120 | 39554978 ~ 39558241 (-) |
| LOC110523789 | gpat3 | coding | upstream | 416716 | 39762574 ~ 39773050 (-) |
| G398852 | NA | non-coding | downstream | 20812 | 39318747 ~ 39320204 (-) |
| G398508 | NA | non-coding | downstream | 202483 | 39138283 ~ 39138533 (-) |
| G398482 | NA | non-coding | downstream | 220556 | 39119522 ~ 39120460 (-) |
| G398483 | NA | non-coding | downstream | 222081 | 39118509 ~ 39118935 (-) |
| G398477 | NA | non-coding | downstream | 224976 | 39115639 ~ 39116040 (-) |
| G398952 | NA | non-coding | upstream | 100977 | 39446835 ~ 39449245 (-) |
| G399006 | NA | non-coding | upstream | 162324 | 39508182 ~ 39508384 (-) |
| G399007 | NA | non-coding | upstream | 162683 | 39508541 ~ 39508990 (-) |
| G398966 | LOC106563758 | non-coding | upstream | 174098 | 39519956 ~ 39521316 (-) |
| G398965 | NA | non-coding | upstream | 175514 | 39521372 ~ 39549843 (-) |
| LOC110522860 | LOC106565786 | other | downstream | 214220 | 39125473 ~ 39129083 (-) |
| G398487 | NA | other | downstream | 215857 | 39124485 ~ 39125159 (-) |
| G397500 | cssa01h5orf42 | other | downstream | 1115496 | 38224981 ~ 38225520 (-) |
| G397378 | NA | other | downstream | 1271042 | 38066275 ~ 38069974 (-) |
| G397094 | NA | other | downstream | 1734975 | 37603796 ~ 37606041 (-) |
| G399742 | LOC106563559 | other | upstream | 848283 | 40194141 ~ 40201203 (-) |
| G399819 | NA | other | upstream | 932160 | 40278018 ~ 40282951 (-) |
| G400909 | hsp30 | other | upstream | 1222349 | 40568207 ~ 40570604 (-) |
| G401044 | NA | other | upstream | 1509913 | 40855771 ~ 40858019 (-) |
