Gene
RNA
| Item | Value |
|---|---|
| gene id | arl15b |
| gene name | arl15 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 44779768 ~ 44853071 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| arl15 | Predicted to enable GTP binding activity and GTPase activity. Located in extracellular exosome. |
| description |
|---|
| ADP-ribosylation factor-like protein 15 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036977639.1 | False | 3378 | mRNA | 0.46 | 6 | 44779768 | 44840743 |
| XM_021603076.2 | False | 3464 | mRNA | 0.45 | 5 | 44779768 | 44852796 |
| XM_021603075.2 | False | 3994 | mRNA | 0.44 | 6 | 44779768 | 44853071 |
| TU459270 | True | 3090 | lncRNA | 0.45 | 3 | 44779776 | 44852641 |
44,720,000
44,730,000
44,740,000
44,750,000
44,760,000
44,770,000
44,780,000
44,790,000
44,800,000
44,810,000
44,820,000
44,830,000
44,840,000
44,850,000
44,860,000
44,870,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523920 | LOC106561814 | coding | downstream | 21502 | 44752915 ~ 44758266 (-) |
| LOC118936294 | LOC106561814 | coding | downstream | 21784 | 44752915 ~ 44757984 (-) |
| LOC118964612 | NA | coding | downstream | 94229 | 44682942 ~ 44685539 (-) |
| LOC110523917 | LOC106561827 | coding | downstream | 156452 | 44610017 ~ 44623316 (-) |
| tcp4 | NA | coding | downstream | 173284 | 44590633 ~ 44606484 (-) |
| LOC110523925 | LOC106562826 | coding | upstream | 62113 | 44915184 ~ 44933176 (-) |
| LOC110522867 | NA | coding | upstream | 117140 | 44970211 ~ 44993581 (-) |
| morn5 | LOC106561708 | coding | upstream | 182675 | 45035746 ~ 45052242 (-) |
| LOC110523936 | LOC106561621 | coding | upstream | 489568 | 45342639 ~ 45472051 (-) |
| LOC110523950 | LOC106561514 | coding | upstream | 1166627 | 46019698 ~ 46023840 (-) |
| G404653 | NA | non-coding | downstream | 11763 | 44766378 ~ 44768005 (-) |
| G404654 | LOC106561792 | non-coding | downstream | 14239 | 44765063 ~ 44765529 (-) |
| G404652 | NA | non-coding | downstream | 14984 | 44764370 ~ 44764784 (-) |
| G404651 | LOC106561792 | non-coding | downstream | 16246 | 44763245 ~ 44763522 (-) |
| G404650 | LOC106561792 | non-coding | downstream | 17301 | 44762077 ~ 44762467 (-) |
| G404829 | NA | non-coding | upstream | 10352 | 44863423 ~ 44863635 (-) |
| G404831 | NA | non-coding | upstream | 13297 | 44866368 ~ 44866579 (-) |
| G404833 | NA | non-coding | upstream | 15561 | 44868632 ~ 44869265 (-) |
| G404859 | NA | non-coding | upstream | 65879 | 44918950 ~ 44920894 (-) |
| G404863 | LOC106561763 | non-coding | upstream | 72131 | 44925202 ~ 44927871 (-) |
| G404649 | NA | other | downstream | 17735 | 44761615 ~ 44762033 (-) |
| G404520 | NA | other | downstream | 139723 | 44639801 ~ 44640045 (-) |
| G404357 | NA | other | downstream | 405894 | 44373498 ~ 44373874 (-) |
| G403104 | NA | other | downstream | 1231494 | 43544687 ~ 43548274 (-) |
| plac8.2 | plac8 | other | downstream | 2744127 | 42033371 ~ 42035641 (-) |
| G404935 | LOC106561730 | other | upstream | 145165 | 44998236 ~ 44998709 (-) |
| G405292 | LOC106561687 | other | upstream | 338461 | 45191532 ~ 45192467 (-) |
| G405871 | NA | other | upstream | 732577 | 45585648 ~ 45586183 (-) |
| G405889 | LOC106561608 | other | upstream | 759357 | 45612428 ~ 45612955 (-) |
| G406076 | LOC100136563 | other | upstream | 1129767 | 45977280 ~ 45989483 (-) |
