LOC110522867


Basic Information

Item Value
gene id LOC110522867
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 44970211 ~ 44993581 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110522867
ttctctgtatctctgtcatttgtgtgtctgtgtgtgacagcGATGGCATTGAGTCAGCTGGGCCTACTGTGGCTGGCTTTGTGCCGATGCCTGGTCCCTTTGTTGAGGTCTTCCTGTCAGCTGGCGGTCAGCTCCAGAGTCCCATTGCTGTTCCCAAATACATGTCATCGAGACAATCGTCCCCACTGCCGCCACCTGCGTTCTCCTGTATGCCACCAAGATGAGTAAAGCGAAGGCAGCGAAGGGCCAGGCGGCCAAAGTGAACATTAACTCCTCGCTGGCGGAGGATATCATCATTCTGGAGGAAGTGAGTGAGGAGATGGCCGCCGTCCTCACCGTCCTGAAAGAGGACTTCAGCCGCAACCTGAGCATCAACACCTCTACAGGAGCTCTGGATCATATCGTGGTGCACACGACAGATGGCAAATTCCCTCTGAACCAGTTGGGTCAGATGTCCATGAAACCCCCTCAGCTCATCGTGGTCAACATGACCGGCTTCCCACACACTGCTGGCTGGGCCATGGCTGCTGCCACCCGCGCCCTGCATGAGAGCAGCATGAAACTCAACCCTGAGGTGGACGGAACCATCATCCGGGTGCTTATTCCCAAGGTGACGCGTGAGTACACGAGAGCCGGGCAGTTCACTATCAAGTCCAAGGAGTCTCTGAGGAGGGTGTGACCGTGTCAGAGGACACCATCCAATTGGTGGAGAAACAAGTACTGAGACTGGGATACGTGTCCAGTCAGAGGGCAGAAATACAATCAGCAGCTACAAATGTTCAGATGAATCCTTTCTATAATTTCACAGTGCTTGTATAATAATACCAATAGTCTTAGTTGTCTAGTAagtgttctctctcctcttctccactctttCAGGTCGGGCAAAATGGCAAACAGCTTTTGCAGCGGGTATAGACATGCAG

Function

NR:

description
ribosome-recycling factor, mitochondrial-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110522867 True 926 mRNA 0.52 5 44970211 44993581

Neighbor

gene id symbol gene type direction distance location
LOC110523925 LOC106562826 coding downstream 37035 44915184 ~ 44933176 (-)
arl15b arl15 coding downstream 117140 44779768 ~ 44853071 (-)
LOC110523920 LOC106561814 coding downstream 211945 44752915 ~ 44758266 (-)
LOC118936294 LOC106561814 coding downstream 212227 44752915 ~ 44757984 (-)
LOC118964612 NA coding downstream 284672 44682942 ~ 44685539 (-)
morn5 LOC106561708 coding upstream 42165 45035746 ~ 45052242 (-)
LOC110523936 LOC106561621 coding upstream 349058 45342639 ~ 45472051 (-)
LOC110523950 LOC106561514 coding upstream 1026117 46019698 ~ 46023840 (-)
LOC110523952 LOC106568444 coding upstream 1141831 46135412 ~ 46171517 (-)
LOC110523954 plgrkt coding upstream 1308231 46301812 ~ 46322518 (-)
G404863 LOC106561763 non-coding downstream 42340 44925202 ~ 44927871 (-)
G404859 NA non-coding downstream 49317 44918950 ~ 44920894 (-)
G404833 NA non-coding downstream 100946 44868632 ~ 44869265 (-)
G404831 NA non-coding downstream 103632 44866368 ~ 44866579 (-)
G404829 NA non-coding downstream 106576 44863423 ~ 44863635 (-)
G404961 NA non-coding upstream 39732 45033313 ~ 45033892 (-)
G404962 NA non-coding upstream 40552 45034133 ~ 45034360 (-)
G404963 NA non-coding upstream 41184 45034765 ~ 45035006 (-)
G404964 NA non-coding upstream 41804 45035385 ~ 45035592 (-)
G405218 NA non-coding upstream 64383 45057964 ~ 45060377 (-)
G404649 NA other downstream 208178 44761615 ~ 44762033 (-)
G404520 NA other downstream 330166 44639801 ~ 44640045 (-)
G404357 NA other downstream 596337 44373498 ~ 44373874 (-)
G403104 NA other downstream 1421937 43544687 ~ 43548274 (-)
plac8.2 plac8 other downstream 2934570 42033371 ~ 42035641 (-)
G404935 LOC106561730 other upstream 4655 44998236 ~ 44998709 (-)
G405292 LOC106561687 other upstream 197951 45191532 ~ 45192467 (-)
G405871 NA other upstream 592067 45585648 ~ 45586183 (-)
G405889 LOC106561608 other upstream 618847 45612428 ~ 45612955 (-)
G406076 LOC100136563 other upstream 989257 45977280 ~ 45989483 (-)

Expression


Co-expression Network