Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964754 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 47695630 ~ 47695682 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051947.1 | True | 53 | mRNA | 0.40 | 1 | 47695630 | 47695682 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523973 | ctif | coding | downstream | 32960 | 47530422 ~ 47662670 (-) |
| add1 | LOC106561289 | coding | downstream | 477986 | 47163745 ~ 47217644 (-) |
| nop14 | nop14 | coding | downstream | 534168 | 47128601 ~ 47161462 (-) |
| LOC110523962 | LOC106561388 | coding | downstream | 1085316 | 46572673 ~ 46610314 (-) |
| oaz1b | oaz1b | coding | downstream | 1134308 | 46549148 ~ 46561361 (-) |
| LOC110523975 | NA | coding | upstream | 131119 | 47826801 ~ 47910245 (-) |
| LOC110523978 | LOC106605670 | coding | upstream | 332099 | 48027781 ~ 48029676 (-) |
| nup54 | nup54 | coding | upstream | 410645 | 48106327 ~ 48125678 (-) |
| LOC110523983 | LOC106560666 | coding | upstream | 729183 | 48423554 ~ 48489102 (-) |
| pdcl | pdcl | coding | upstream | 844400 | 48540082 ~ 48544432 (-) |
| G408094 | NA | non-coding | downstream | 193 | 47695205 ~ 47695437 (-) |
| G408070 | NA | non-coding | downstream | 15560 | 47679536 ~ 47680070 (-) |
| G408067 | NA | non-coding | downstream | 18506 | 47676917 ~ 47677124 (-) |
| G408064 | NA | non-coding | downstream | 19991 | 47674937 ~ 47675639 (-) |
| G408013 | NA | non-coding | downstream | 88227 | 47592967 ~ 47607403 (-) |
| G408406 | NA | non-coding | upstream | 53232 | 47748914 ~ 47754152 (-) |
| G408502 | NA | non-coding | upstream | 194847 | 47890529 ~ 47905362 (-) |
| G408547 | NA | non-coding | upstream | 293915 | 47989597 ~ 47990746 (-) |
| G408553 | NA | non-coding | upstream | 308978 | 48004660 ~ 48005111 (-) |
| G408554 | NA | non-coding | upstream | 312007 | 48007689 ~ 48008033 (-) |
| G406588 | NA | other | downstream | 1461093 | 46219667 ~ 46234537 (-) |
| LOC110523950 | LOC106561514 | other | downstream | 1671790 | 46019698 ~ 46023840 (-) |
| G406076 | LOC100136563 | other | downstream | 1706147 | 45977280 ~ 45989483 (-) |
| G405889 | LOC106561608 | other | downstream | 2082675 | 45612428 ~ 45612955 (-) |
| G408664 | NA | other | upstream | 526270 | 48221952 ~ 48223220 (-) |
| G408782 | sec16a | other | upstream | 657620 | 48353302 ~ 48357565 (-) |
| G410168 | NA | other | upstream | 1838234 | 49533916 ~ 49576456 (-) |
| G411459 | NA | other | upstream | 2923209 | 50618891 ~ 50619175 (-) |
| G411929 | NA | other | upstream | 3026632 | 50722314 ~ 50723061 (-) |
