Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523978 |
| gene name | LOC106605670 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48027781 ~ 48029676 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106605670 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036977728.1 | True | 1761 | mRNA | 0.44 | 2 | 48027781 | 48029676 |
48,024,000
48,024,400
48,024,800
48,025,200
48,025,600
48,026,000
48,026,400
48,026,800
48,027,200
48,027,600
48,028,000
48,028,400
48,028,800
48,029,200
48,029,600
48,030,000
48,030,400
48,030,800
48,031,200
48,031,600
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523975 | NA | coding | downstream | 117536 | 47826801 ~ 47910245 (-) |
| LOC118964754 | NA | coding | downstream | 332099 | 47695630 ~ 47695682 (-) |
| LOC110523973 | ctif | coding | downstream | 365111 | 47530422 ~ 47662670 (-) |
| add1 | LOC106561289 | coding | downstream | 810137 | 47163745 ~ 47217644 (-) |
| nop14 | nop14 | coding | downstream | 866319 | 47128601 ~ 47161462 (-) |
| nup54 | nup54 | coding | upstream | 76651 | 48106327 ~ 48125678 (-) |
| LOC110523983 | LOC106560666 | coding | upstream | 395189 | 48423554 ~ 48489102 (-) |
| pdcl | pdcl | coding | upstream | 510406 | 48540082 ~ 48544432 (-) |
| pdxp | plpp | coding | upstream | 545074 | 48574750 ~ 48580663 (-) |
| mier3a | LOC105008092 | coding | upstream | 617230 | 48646906 ~ 48693022 (-) |
| G408554 | NA | non-coding | downstream | 19748 | 48007689 ~ 48008033 (-) |
| G408553 | NA | non-coding | downstream | 22670 | 48004660 ~ 48005111 (-) |
| G408547 | NA | non-coding | downstream | 37035 | 47989597 ~ 47990746 (-) |
| G408502 | NA | non-coding | downstream | 122419 | 47890529 ~ 47905362 (-) |
| G408406 | NA | non-coding | downstream | 273629 | 47748914 ~ 47754152 (-) |
| G408560 | NA | non-coding | upstream | 24412 | 48054088 ~ 48068071 (-) |
| G408561 | NA | non-coding | upstream | 27138 | 48056814 ~ 48059345 (-) |
| G408564 | NA | non-coding | upstream | 34107 | 48063783 ~ 48146011 (-) |
| G408591 | NA | non-coding | upstream | 70656 | 48100332 ~ 48102569 (-) |
| G408623 | LOC106560682 | non-coding | upstream | 133914 | 48163590 ~ 48164373 (-) |
| LOC110523962 | LOC106561388 | other | downstream | 1417666 | 46572673 ~ 46610314 (-) |
| G406588 | NA | other | downstream | 1793244 | 46219667 ~ 46234537 (-) |
| LOC110523950 | LOC106561514 | other | downstream | 2003941 | 46019698 ~ 46023840 (-) |
| G406076 | LOC100136563 | other | downstream | 2038298 | 45977280 ~ 45989483 (-) |
| G405889 | LOC106561608 | other | downstream | 2414826 | 45612428 ~ 45612955 (-) |
| G408664 | NA | other | upstream | 192276 | 48221952 ~ 48223220 (-) |
| G408782 | sec16a | other | upstream | 323626 | 48353302 ~ 48357565 (-) |
| G410168 | NA | other | upstream | 1504240 | 49533916 ~ 49576456 (-) |
| G411459 | NA | other | upstream | 2589215 | 50618891 ~ 50619175 (-) |
| G411929 | NA | other | upstream | 2692638 | 50722314 ~ 50723061 (-) |
