nup54 (nup54)


Basic Information

Item Value
gene id nup54
gene name nup54
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 48106327 ~ 48125678 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603200.2
gagagaggcaggttgaggtttccagggttatagtagtgcagaggttgtcatatgctgaggcagtgaagaaagtagggGAAGAAGGGTCaaggatcctgagaggagtggtgtgagtagatCGGTACCAATACAGAGGGATAAACCAACAAGTGATATATGTTTCAGttagcatttatagcaatggttatgaactgtactgcagggatggaatgtAAGTCGCAGAAAATTGAGGTTGCGGTGGCAGatgcagagaggtatttgggtgtgcgagactgaacgtcagaagagttacagggtgtgttaagtggtggtgtcccatcctttcaggctGTTGGCCTGAAGTAGGACTAAATATATTTAAACATTGGAGTATGCTGTTTTTTGTGAGTGCAGTGTTAGATAGTAgggtatttgtttatttgtttaaaaaaattaaagcAAAGTTATAAAGCagttatactccagtctagtaggtggctgtaatgcaacatttattggatgccaaccaccATTAAACCTcatcaaagaagaagaaaaatttATTTCGCGGAACTATACAATCCAACGACACTTCCTGCACGGACCCAATTTGCTGTGAACAGGAGTAATCATGGCGTTCAACTTTGGCGGCGCTGCCACCAACCCAGCAACAGGTCTTGCAGTCCCTGGTTTCGGGACCACCACCACTGCTGCGGCCCCCGCTGGCTTCGGCGGCTTCGGCACCACCACCACAGGTGCTTTTGGGGGTTTTGGGACAACCACTACATCCGCTGCTGCGCCTGGGTCAACTTTCAGCTTCGCCGCTCCTGCAAGCACAACAGGAGGACTGTTTGGTAATACCCAGAATAAGGGATTTGGGTTCTCCTCTGGGCTGGGCACTGGCACTACTGCTGCAGCTGGGTTTGGAACAGGTCTGGGGACAACTCTAGGAGGTGGATTTGGTGGCTTCAATATCCAGCCACAGCAGCAACAGCAAGGAAGCTTTTTTGGGCAGCAGGCCCAGGCCCCGGCCCAGTCTAATCAGCTCGTCCACACAGCTAACGCCCTGTCTGCCCCCACCCTGCTTGGGGACGAGAGAGATGCCATCTTGGCCAAGTGGAATCAGCTCCAGGCCTTCTGGGGAACAGGCAAGGGCTATTTCAACAACCAACTCCCCCCTGTAGACTTCACACAGGAGAACCCTTTCTGCAGGTTCAAGGCGGTGGGCTACAGCTGTATCCCAGGCAGTAAGGATGAGGATGGTCTGGTTGTCCTGGCCTTCAATAAGAAGGAGGCTGATGTTCGTAGCCAACAGCAGCAGCTGGTTGAGTCTCTACACAAGGTGCTGGGAGGGAACCAGACTCTCACCGTCAACGTAGAGGGAGTCAAAGCCCTGCCTGATGACCAGACGGAGGTGGTGATCTATGTGGTGGAGCGTTCTCCTAACGGCACATCTAAGAGGATCCCAGCTACAACATTGTACAGCTATGTAGAGCAGGCTAACACTAAGGCCCAGCTCACACAGCTAGCAGTTTTCATGTCTGTTACACGCACTGAGCTCTCACCAGCACAGCTCAAACAGCTGCTGGCGAATGCACCAGCAGGAGTGGATCCCATCATTTGGGAACAGGCAAAGGTGGATAACCCTGATGCGGACAAGTTGATCCCCGTCCCCATGGTTGGTTTCAAAGAACTACTCCGCAGACTGAAGATTCAGGACCAGATGACCAAACAGCACCAGTCCAGAGTAGACATCATCTCTAATGACATCAGTGAACTGCAGAAGAACCAGGCAACAACAGTGGCTAAGATCGCTCAATACAAGAGGAAGCTGATGGATCTCTCTCACAGAGTACTACAGgtgctGATCAAGCAGGAGATTCAGAGGAAGAGTGGCTATGCCATCCAGGTAGATGAGGAGCACCTAAGAGTGCAGCTGGACACCATCCAGTGTGAACTCAATGCCCCCACGCAGTTTAAGGGGCGTCTGAACGAGCTGATGTCTCAGATCCGGATGCAGAACCACTTTGGGGCGGTGCGCTCAGAGGAACGATATAGTGTGGACGGAGACCTTCTCCGAGAGATCAGACAGCACctgaagcagcagcaggagggtCTGAGTCAGCTTATCAGTGTGATCAAAGATGACGTGGAAGACATCAAACTGATAGAACATGGCCTCCTGGACAGACTCGGCTGACCTCAAAGGTCCTCCCAGGCCCCACGtgaccctgaatctctctctcactgctgaCAAAAGTTAAAGGTTTATGCCTCTTCTTAGCAAGGCATATATCTGTATTTTctatggtctgtctgtcttcaatTCAGAGGTGCTTTCTCACACAGATTAATCCTTGTCCTGGCTAATGGCTCAATATTGAATCTCAATCAAAAAtcctttttagtccaggactaggtatAATTTTTGTCTTGGAAACTGCCCCTAAAATCCCCaaacatctaaactggaacaagaCTGCCTTAGAAAAACTGCCAGACCGTCTGGTGGACACTCTGGTTGACAGCCAGTGAAATGTGACTGTTTGATGATTTGGTGTGATATTCAAGTGCGATATTCAACACATTGTAAATAAATACGCCTTTTATTATTGCTTTAGTAATATTTTATATGATTGAATAAGAATTATACACAACCCCAACATGGTTTAATAAAATGTCATTGAGGAGCCTTTTTCAACATGA
>XM_021603199.2
cgagagaggcaggttgaggtttccagggttatagtagtgcagaggttgtcatatgctgaggcagtgaagaaagtagggGAAGAAGGGTCaaggatcctgagaggagtggtgtgagtagatCGGTACCAATACAGAGGGATAAACCAACAAGTGATATATGTTTCAGttagcatttatagcaatggttatgaactgtactgcagggatggaatgtAAGTCGCAGAAAATTGAGGTTGCGGTGGCAGatgcagagaggtatttgggtgtgcgagactgaacgtcagaagagttacagggtgtgttaagtggtggtgtcccatcctttcaggctGTTGGCCTGAAGTAGGACTAAATATATTTAAACATTGGAGTATGCTGTTTTTTGTGAGTGCAGTGTTAGATAGTAgggtatttgtttatttgtttaaaaaaattaaagcAAAGTTATAAAGCagttatactccagtctagtaggtggctgtaatgcaacatttattggatgccaaccaccATTAAACCTcatcaaagaagaagaaaaatttATTTCGCGGAACTATACAATCCAACGACACTTCCTGCACGGACCCAATTTGCTGTGAACAGGAGTAATCATGGCGTTCAACTTTGGCGGCGCTGCCACCAACCCAGCAACAGGTCTTGCAGTCCCTGGTTTCGGGACCACCACCACTGCTGCGGCCCCCGCTGGCTTCGGCGGCTTCGGCACCACCACCACAGGATTTGGGGGGCTAGGAGCCGGGAGCACCACGTCTGGTGCTTTTGGGGGTTTTGGGACAACCACTACATCCGCTGCTGCGCCTGGGTCAACTTTCAGCTTCGCCGCTCCTGCAAGCACAACAGGAGGACTGTTTGGTAATACCCAGAATAAGGGATTTGGGTTCTCCTCTGGGCTGGGCACTGGCACTACTGCTGCAGCTGGGTTTGGAACAGGTCTGGGGACAACTCTAGGAGGTGGATTTGGTGGCTTCAATATCCAGCCACAGCAGCAACAGCAAGGAAGCTTTTTTGGGCAGCAGGCCCAGGCCCCGGCCCAGTCTAATCAGCTCGTCCACACAGCTAACGCCCTGTCTGCCCCCACCCTGCTTGGGGACGAGAGAGATGCCATCTTGGCCAAGTGGAATCAGCTCCAGGCCTTCTGGGGAACAGGCAAGGGCTATTTCAACAACCAACTCCCCCCTGTAGACTTCACACAGGAGAACCCTTTCTGCAGGTTCAAGGCGGTGGGCTACAGCTGTATCCCAGGCAGTAAGGATGAGGATGGTCTGGTTGTCCTGGCCTTCAATAAGAAGGAGGCTGATGTTCGTAGCCAACAGCAGCAGCTGGTTGAGTCTCTACACAAGGTGCTGGGAGGGAACCAGACTCTCACCGTCAACGTAGAGGGAGTCAAAGCCCTGCCTGATGACCAGACGGAGGTGGTGATCTATGTGGTGGAGCGTTCTCCTAACGGCACATCTAAGAGGATCCCAGCTACAACATTGTACAGCTATGTAGAGCAGGCTAACACTAAGGCCCAGCTCACACAGCTAGCAGTTTTCATGTCTGTTACACGCACTGAGCTCTCACCAGCACAGCTCAAACAGCTGCTGGCGAATGCACCAGCAGGAGTGGATCCCATCATTTGGGAACAGGCAAAGGTGGATAACCCTGATGCGGACAAGTTGATCCCCGTCCCCATGGTTGGTTTCAAAGAACTACTCCGCAGACTGAAGATTCAGGACCAGATGACCAAACAGCACCAGTCCAGAGTAGACATCATCTCTAATGACATCAGTGAACTGCAGAAGAACCAGGCAACAACAGTGGCTAAGATCGCTCAATACAAGAGGAAGCTGATGGATCTCTCTCACAGAGTACTACAGgtgctGATCAAGCAGGAGATTCAGAGGAAGAGTGGCTATGCCATCCAGGTAGATGAGGAGCACCTAAGAGTGCAGCTGGACACCATCCAGTGTGAACTCAATGCCCCCACGCAGTTTAAGGGGCGTCTGAACGAGCTGATGTCTCAGATCCGGATGCAGAACCACTTTGGGGCGGTGCGCTCAGAGGAACGATATAGTGTGGACGGAGACCTTCTCCGAGAGATCAGACAGCACctgaagcagcagcaggagggtCTGAGTCAGCTTATCAGTGTGATCAAAGATGACGTGGAAGACATCAAACTGATAGAACATGGCCTCCTGGACAGACTCGGCTGACCTCAAAGGTCCTCCCAGGCCCCACGtgaccctgaatctctctctcactgctgaCAAAAGTTAAAGGTTTATGCCTCTTCTTAGCAAGGCATATATCTGTATTTTctatggtctgtctgtcttcaatTCAGAGGTGCTTTCTCACACAGATTAATCCTTGTCCTGGCTAATGGCTCAATATTGAATCTCAATCAAAAAtcctttttagtccaggactaggtatAATTTTTGTCTTGGAAACTGCCCCTAAAATCCCCaaacatctaaactggaacaagaCTGCCTTAGAAAAACTGCCAGACCGTCTGGTGGACACTCTGGTTGACAGCCAGTGAAATGTGACTGTTTGATGATTTGGTGTGATATTCAAGTGCGATATTCAACACATTGTAAATAAATACGCCTTTTATTATTGCTTTAGTAATATTTTATATGATTGAATAAGAATTATACACAACCCCAACATGGTTTAATAAAATGTCATTGAGGAGCCTTTTTCAACATGA
>XM_021603202.2
cgagagaggcaggttgaggtttccagggttatagtagtgcagaggttgtcatatgctgaggcagtgaagaaagtagggGAAGAAGGGTCaaggatcctgagaggagtggtgtgagtagatCGGTACCAATACAGAGGGATAAACCAACAAGTGATATATGTTTCAGttagcatttatagcaatggttatgaactgtactgcagggatggaatgtAAGTCGCAGAAAATTGAGGTTGCGGTGGCAGatgcagagaggtatttgggtgtgcgagactgaacgtcagaagagttacagggtgtgttaagtggtggtgtcccatcctttcaggctGTTGGCCTGAAGTAGGACTAAATATATTTAAACATTGGAGTATGCTGTTTTTTGTGAGTGCAGTGTTAGATAGTAgggtatttgtttatttgtttaaaaaaattaaagcAAAGTTATAAAGCagttatactccagtctagtaggtggctgtaatgcaacatttattggatgccaaccaccATTAAACCTcatcaaagaagaagaaaaatttATTTCGCGGAACTATACAATCCAACGACACTTCCTGCACGGACCCAATTTGCTGTGAACAGGAGTAATCATGGCGTTCAACTTTGGCGGCGCTGCCACCAACCCAGCAACAGGTCTTGCAGTCCCTGGTTTCGGGACCACCACCACTGCTGCGGCCCCCGCTGGCTTCGGCGGCTTCGGCACCACCACCACAGGTGCTTTTGGGGGTTTTGGGACAACCACTACATCCGCTGCTGCGCCTGGGTCAACTTTCAGCTTCGCCGCTCCTGCAAGCACAACAGGAGGACTGTTTGGTAATACCCAGAATAAGGGATTTGGGTTCTCCTCTGGGCTGGGCACTGGCACTACTGCTGCAGCTGGGTTTGGAACAGGTCTGGGGACAACTCTAGGAGGTGGATTTGGTGGCTTCAATATCCAGCCACAGCAGCAACAGCAAGCTAACGCCCTGTCTGCCCCCACCCTGCTTGGGGACGAGAGAGATGCCATCTTGGCCAAGTGGAATCAGCTCCAGGCCTTCTGGGGAACAGGCAAGGGCTATTTCAACAACCAACTCCCCCCTGTAGACTTCACACAGGAGAACCCTTTCTGCAGGTTCAAGGCGGTGGGCTACAGCTGTATCCCAGGCAGTAAGGATGAGGATGGTCTGGTTGTCCTGGCCTTCAATAAGAAGGAGGCTGATGTTCGTAGCCAACAGCAGCAGCTGGTTGAGTCTCTACACAAGGTGCTGGGAGGGAACCAGACTCTCACCGTCAACGTAGAGGGAGTCAAAGCCCTGCCTGATGACCAGACGGAGGTGGTGATCTATGTGGTGGAGCGTTCTCCTAACGGCACATCTAAGAGGATCCCAGCTACAACATTGTACAGCTATGTAGAGCAGGCTAACACTAAGGCCCAGCTCACACAGCTAGCAGTTTTCATGTCTGTTACACGCACTGAGCTCTCACCAGCACAGCTCAAACAGCTGCTGGCGAATGCACCAGCAGGAGTGGATCCCATCATTTGGGAACAGGCAAAGGTGGATAACCCTGATGCGGACAAGTTGATCCCCGTCCCCATGGTTGGTTTCAAAGAACTACTCCGCAGACTGAAGATTCAGGACCAGATGACCAAACAGCACCAGTCCAGAGTAGACATCATCTCTAATGACATCAGTGAACTGCAGAAGAACCAGGCAACAACAGTGGCTAAGATCGCTCAATACAAGAGGAAGCTGATGGATCTCTCTCACAGAGTACTACAGgtgctGATCAAGCAGGAGATTCAGAGGAAGAGTGGCTATGCCATCCAGGTAGATGAGGAGCACCTAAGAGTGCAGCTGGACACCATCCAGTGTGAACTCAATGCCCCCACGCAGTTTAAGGGGCGTCTGAACGAGCTGATGTCTCAGATCCGGATGCAGAACCACTTTGGGGCGGTGCGCTCAGAGGAACGATATAGTGTGGACGGAGACCTTCTCCGAGAGATCAGACAGCACctgaagcagcagcaggagggtCTGAGTCAGCTTATCAGTGTGATCAAAGATGACGTGGAAGACATCAAACTGATAGAACATGGCCTCCTGGACAGACTCGGCTGACCTCAAAGGTCCTCCCAGGCCCCACGtgaccctgaatctctctctcactgctgaCAAAAGTTAAAGGTTTATGCCTCTTCTTAGCAAGGCATATATCTGTATTTTctatggtctgtctgtcttcaatTCAGAGGTGCTTTCTCACACAGATTAATCCTTGTCCTGGCTAATGGCTCAATATTGAATCTCAATCAAAAAtcctttttagtccaggactaggtatAATTTTTGTCTTGGAAACTGCCCCTAAAATCCCCaaacatctaaactggaacaagaCTGCCTTAGAAAAACTGCCAGACCGTCTGGTGGACACTCTGGTTGACAGCCAGTGAAATGTGACTGTTTGATGATTTGGTGTGATATTCAAGTGCGATATTCAACACATTGTAAATAAATACGCCTTTTATTATTGCTTTAGTAATATTTTATATGATTGAATAAGAATTATACACAACCCCAACATGGTTTAATAAAATGTCATTGAGGAGCCTTTTTCAACATGA
>XM_021603203.2
cgagagaggcaggttgaggtttccagggttatagtagtgcagaggttgtcatatgctgaggcagtgaagaaagtagggGAAGAAGGGTCaaggatcctgagaggagtggtgtgagtagatCGGTACCAATACAGAGGGATAAACCAACAAGTGATATATGTTTCAGttagcatttatagcaatggttatgaactgtactgcagggatggaatgtAAGTCGCAGAAAATTGAGGTTGCGGTGGCAGatgcagagaggtatttgggtgtgcgagactgaacgtcagaagagttacagggtgtgttaagtggtggtgtcccatcctttcaggctGTTGGCCTGAAGTAGGACTAAATATATTTAAACATTGGAGTATGCTGTTTTTTGTGAGTGCAGTGTTAGATAGTAgggtatttgtttatttgtttaaaaaaattaaagcAAAGTTATAAAGCagttatactccagtctagtaggtggctgtaatgcaacatttattggatgccaaccaccATTAAACCTcatcaaagaagaagaaaaatttATTTCGCGGAACTATACAATCCAACGACACTTCCTGCACGGACCCAATTTGCTGTGAACAGGAGTAATCATGGCGTTCAACTTTGGCGGCGCTGCCACCAACCCAGCAACAGGTCTTGCAGTCCCTGGTTTCGGGACCACCACCACTGCTGCGGCCCCCGCTGGCTTCGGCGGCTTCGGCACCACCACCACAGGAGGACTGTTTGGTAATACCCAGAATAAGGGATTTGGGTTCTCCTCTGGGCTGGGCACTGGCACTACTGCTGCAGCTGGGTTTGGAACAGGTCTGGGGACAACTCTAGGAGGTGGATTTGGTGGCTTCAATATCCAGCCACAGCAGCAACAGCAAGGAAGCTTTTTTGGGCAGCAGGCCCAGGCCCCGGCCCAGTCTAATCAGCTCGTCCACACAGCTAACGCCCTGTCTGCCCCCACCCTGCTTGGGGACGAGAGAGATGCCATCTTGGCCAAGTGGAATCAGCTCCAGGCCTTCTGGGGAACAGGCAAGGGCTATTTCAACAACCAACTCCCCCCTGTAGACTTCACACAGGAGAACCCTTTCTGCAGGTTCAAGGCGGTGGGCTACAGCTGTATCCCAGGCAGTAAGGATGAGGATGGTCTGGTTGTCCTGGCCTTCAATAAGAAGGAGGCTGATGTTCGTAGCCAACAGCAGCAGCTGGTTGAGTCTCTACACAAGGTGCTGGGAGGGAACCAGACTCTCACCGTCAACGTAGAGGGAGTCAAAGCCCTGCCTGATGACCAGACGGAGGTGGTGATCTATGTGGTGGAGCGTTCTCCTAACGGCACATCTAAGAGGATCCCAGCTACAACATTGTACAGCTATGTAGAGCAGGCTAACACTAAGGCCCAGCTCACACAGCTAGCAGTTTTCATGTCTGTTACACGCACTGAGCTCTCACCAGCACAGCTCAAACAGCTGCTGGCGAATGCACCAGCAGGAGTGGATCCCATCATTTGGGAACAGGCAAAGGTGGATAACCCTGATGCGGACAAGTTGATCCCCGTCCCCATGGTTGGTTTCAAAGAACTACTCCGCAGACTGAAGATTCAGGACCAGATGACCAAACAGCACCAGTCCAGAGTAGACATCATCTCTAATGACATCAGTGAACTGCAGAAGAACCAGGCAACAACAGTGGCTAAGATCGCTCAATACAAGAGGAAGCTGATGGATCTCTCTCACAGAGTACTACAGgtgctGATCAAGCAGGAGATTCAGAGGAAGAGTGGCTATGCCATCCAGGTAGATGAGGAGCACCTAAGAGTGCAGCTGGACACCATCCAGTGTGAACTCAATGCCCCCACGCAGTTTAAGGGGCGTCTGAACGAGCTGATGTCTCAGATCCGGATGCAGAACCACTTTGGGGCGGTGCGCTCAGAGGAACGATATAGTGTGGACGGAGACCTTCTCCGAGAGATCAGACAGCACctgaagcagcagcaggagggtCTGAGTCAGCTTATCAGTGTGATCAAAGATGACGTGGAAGACATCAAACTGATAGAACATGGCCTCCTGGACAGACTCGGCTGACCTCAAAGGTCCTCCCAGGCCCCACGtgaccctgaatctctctctcactgctgaCAAAAGTTAAAGGTTTATGCCTCTTCTTAGCAAGGCATATATCTGTATTTTctatggtctgtctgtcttcaatTCAGAGGTGCTTTCTCACACAGATTAATCCTTGTCCTGGCTAATGGCTCAATATTGAATCTCAATCAAAAAtcctttttagtccaggactaggtatAATTTTTGTCTTGGAAACTGCCCCTAAAATCCCCaaacatctaaactggaacaagaCTGCCTTAGAAAAACTGCCAGACCGTCTGGTGGACACTCTGGTTGACAGCCAGTGAAATGTGACTGTTTGATGATTTGGTGTGATATTCAAGTGCGATATTCAACACATTGTAAATAAATACGCCTTTTATTATTGCTTTAGTAATATTTTATATGATTGAATAAGAATTATACACAACCCCAACATGGTTTAATAAAATGTCATTGAGGAGCCTTTTTCAACATGA
>XM_036977729.1
cgagagaggcaggttgaggtttccagggttatagtagtgcagaggttgtcatatgctgaggcagtgaagaaagtagggGAAGAAGGGTCaaggatcctgagaggagtggtgtgagtagatCGGTACCAATACAGAGGGATAAACCAACAAGTGATATATGTTTCAGttagcatttatagcaatggttatgaactgtactgcagggatggaatgtAAGTCGCAGAAAATTGAGGTTGCGGTGGCAGatgcagagaggtatttgggtgtgcgagactgaacgtcagaagagttacagggtgtgttaagtggtggtgtcccatcctttcaggctGTTGGCCTGAAGTAGGACTAAATATATTTAAACATTGGAGTATGCTGTTTTTTGTGAGTGCAGTGTTAGATAGTAgggtatttgtttatttgtttaaaaaaattaaagcAAAGTTATAAAGCagttatactccagtctagtaggtggctgtaatgcaacatttattggatgccaaccaccATTAAACCTcatcaaagaagaagaaaaatttATTTCGCGGAACTATACAATCCAACGACACTTCCTGCACGGACCCAATTTGCTGTGAACAGGAGTAATCATGGCGTTCAACTTTGGCGGCGCTGCCACCAACCCAGCAAGTCTTGCAGTCCCTGGTTTCGGGACCACCACCACTGCTGCGGCCCCCGCTGGCTTCGGCGGCTTCGGCACCACCACCACAGGATTTGGGGGGCTAGGAGCCGGGAGCACCACGTCTGGTGCTTTTGGGGGTTTTGGGACAACCACTACATCCGCTGCTGCGCCTGGGTCAACTTTCAGCTTCGCCGCTCCTGCAAGCACAACAGGAGGACTGTTTGGTAATACCCAGAATAAGGGATTTGGGTTCTCCTCTGGGCTGGGCACTGGCACTACTGCTGCAGCTGGGTTTGGAACAGGTCTGGGGACAACTCTAGGAGGTGGATTTGGTGGCTTCAATATCCAGCCACAGCAGCAACAGCAAGGAAGCTTTTTTGGGCAGCAGGCCCAGGCCCCGGCCCAGTCTAATCAGCTCGTCCACACAGCTAACGCCCTGTCTGCCCCCACCCTGCTTGGGGACGAGAGAGATGCCATCTTGGCCAAGTGGAATCAGCTCCAGGCCTTCTGGGGAACAGGCAAGGGCTATTTCAACAACCAACTCCCCCCTGTAGACTTCACACAGGAGAACCCTTTCTGCAGGTTCAAGGCGGTGGGCTACAGCTGTATCCCAGGCAGTAAGGATGAGGATGGTCTGGTTGTCCTGGCCTTCAATAAGAAGGAGGCTGATGTTCGTAGCCAACAGCAGCAGCTGGTTGAGTCTCTACACAAGGTGCTGGGAGGGAACCAGACTCTCACCGTCAACGTAGAGGGAGTCAAAGCCCTGCCTGATGACCAGACGGAGGTGGTGATCTATGTGGTGGAGCGTTCTCCTAACGGCACATCTAAGAGGATCCCAGCTACAACATTGTACAGCTATGTAGAGCAGGCTAACACTAAGGCCCAGCTCACACAGCTAGCAGTTTTCATGTCTGTTACACGCACTGAGCTCTCACCAGCACAGCTCAAACAGCTGCTGGCGAATGCACCAGCAGGAGTGGATCCCATCATTTGGGAACAGGCAAAGGTGGATAACCCTGATGCGGACAAGTTGATCCCCGTCCCCATGGTTGGTTTCAAAGAACTACTCCGCAGACTGAAGATTCAGGACCAGATGACCAAACAGCACCAGTCCAGAGTAGACATCATCTCTAATGACATCAGTGAACTGCAGAAGAACCAGGCAACAACAGTGGCTAAGATCGCTCAATACAAGAGGAAGCTGATGGATCTCTCTCACAGAGTACTACAGgtgctGATCAAGCAGGAGATTCAGAGGAAGAGTGGCTATGCCATCCAGGTAGATGAGGAGCACCTAAGAGTGCAGCTGGACACCATCCAGTGTGAACTCAATGCCCCCACGCAGTTTAAGGGGCGTCTGAACGAGCTGATGTCTCAGATCCGGATGCAGAACCACTTTGGGGCGGTGCGCTCAGAGGAACGATATAGTGTGGACGGAGACCTTCTCCGAGAGATCAGACAGCACctgaagcagcagcaggagggtCTGAGTCAGCTTATCAGTGTGATCAAAGATGACGTGGAAGACATCAAACTGATAGAACATGGCCTCCTGGACAGACTCGGCTGACCTCAAAGGTCCTCCCAGGCCCCACGtgaccctgaatctctctctcactgctgaCAAAAGTTAAAGGTTTATGCCTCTTCTTAGCAAGGCATATATCTGTATTTTctatggtctgtctgtcttcaatTCAGAGGTGCTTTCTCACACAGATTAATCCTTGTCCTGGCTAATGGCTCAATATTGAATCTCAATCAAAAAtcctttttagtccaggactaggtatAATTTTTGTCTTGGAAACTGCCCCTAAAATCCCCaaacatctaaactggaacaagaCTGCCTTAGAAAAACTGCCAGACCGTCTGGTGGACACTCTGGTTGACAGCCAGTGAAATGTGACTGTTTGATGATTTGGTGTGATATTCAAGTGCGATATTCAACACATTGTAAATAAATACGCCTTTTATTATTGCTTTAGTAATATTTTATATGATTGAATAAGAATTATACACAACCCCAACATGGTTTAATAAAATGTCATTGAGGAGCCTTTTTCAACATGA
>XM_036977730.1
cgagagaggcaggttgaggtttccagggttatagtagtgcagaggttgtcatatgctgaggcagtgaagaaagtagggGAAGAAGGGTCaaggatcctgagaggagtggtgtgagtagatCGGTACCAATACAGAGGGATAAACCAACAAGTGATATATGTTTCAGttagcatttatagcaatggttatgaactgtactgcagggatggaatgtAAGTCGCAGAAAATTGAGGTTGCGGTGGCAGatgcagagaggtatttgggtgtgcgagactgaacgtcagaagagttacagggtgtgttaagtggtggtgtcccatcctttcaggctGTTGGCCTGAAGTAGGACTAAATATATTTAAACATTGGAGTATGCTGTTTTTTGTGAGTGCAGTGTTAGATAGTAgggtatttgtttatttgtttaaaaaaattaaagcAAAGTTATAAAGCagttatactccagtctagtaggtggctgtaatgcaacatttattggatgccaaccaccATTAAACCTcatcaaagaagaagaaaaatttATTTCGCGGAACTATACAATCCAACGACACTTCCTGCACGGACCCAATTTGCTGTGAACAGGAGTAATCATGGCGTTCAACTTTGGCGGCGCTGCCACCAACCCAGCAAGTCTTGCAGTCCCTGGTTTCGGGACCACCACCACTGCTGCGGCCCCCGCTGGCTTCGGCGGCTTCGGCACCACCACCACAGGTGCTTTTGGGGGTTTTGGGACAACCACTACATCCGCTGCTGCGCCTGGGTCAACTTTCAGCTTCGCCGCTCCTGCAAGCACAACAGGAGGACTGTTTGGTAATACCCAGAATAAGGGATTTGGGTTCTCCTCTGGGCTGGGCACTGGCACTACTGCTGCAGCTGGGTTTGGAACAGGTCTGGGGACAACTCTAGGAGGTGGATTTGGTGGCTTCAATATCCAGCCACAGCAGCAACAGCAAGGAAGCTTTTTTGGGCAGCAGGCCCAGGCCCCGGCCCAGTCTAATCAGCTCGTCCACACAGCTAACGCCCTGTCTGCCCCCACCCTGCTTGGGGACGAGAGAGATGCCATCTTGGCCAAGTGGAATCAGCTCCAGGCCTTCTGGGGAACAGGCAAGGGCTATTTCAACAACCAACTCCCCCCTGTAGACTTCACACAGGAGAACCCTTTCTGCAGGTTCAAGGCGGTGGGCTACAGCTGTATCCCAGGCAGTAAGGATGAGGATGGTCTGGTTGTCCTGGCCTTCAATAAGAAGGAGGCTGATGTTCGTAGCCAACAGCAGCAGCTGGTTGAGTCTCTACACAAGGTGCTGGGAGGGAACCAGACTCTCACCGTCAACGTAGAGGGAGTCAAAGCCCTGCCTGATGACCAGACGGAGGTGGTGATCTATGTGGTGGAGCGTTCTCCTAACGGCACATCTAAGAGGATCCCAGCTACAACATTGTACAGCTATGTAGAGCAGGCTAACACTAAGGCCCAGCTCACACAGCTAGCAGTTTTCATGTCTGTTACACGCACTGAGCTCTCACCAGCACAGCTCAAACAGCTGCTGGCGAATGCACCAGCAGGAGTGGATCCCATCATTTGGGAACAGGCAAAGGTGGATAACCCTGATGCGGACAAGTTGATCCCCGTCCCCATGGTTGGTTTCAAAGAACTACTCCGCAGACTGAAGATTCAGGACCAGATGACCAAACAGCACCAGTCCAGAGTAGACATCATCTCTAATGACATCAGTGAACTGCAGAAGAACCAGGCAACAACAGTGGCTAAGATCGCTCAATACAAGAGGAAGCTGATGGATCTCTCTCACAGAGTACTACAGgtgctGATCAAGCAGGAGATTCAGAGGAAGAGTGGCTATGCCATCCAGGTAGATGAGGAGCACCTAAGAGTGCAGCTGGACACCATCCAGTGTGAACTCAATGCCCCCACGCAGTTTAAGGGGCGTCTGAACGAGCTGATGTCTCAGATCCGGATGCAGAACCACTTTGGGGCGGTGCGCTCAGAGGAACGATATAGTGTGGACGGAGACCTTCTCCGAGAGATCAGACAGCACctgaagcagcagcaggagggtCTGAGTCAGCTTATCAGTGTGATCAAAGATGACGTGGAAGACATCAAACTGATAGAACATGGCCTCCTGGACAGACTCGGCTGACCTCAAAGGTCCTCCCAGGCCCCACGtgaccctgaatctctctctcactgctgaCAAAAGTTAAAGGTTTATGCCTCTTCTTAGCAAGGCATATATCTGTATTTTctatggtctgtctgtcttcaatTCAGAGGTGCTTTCTCACACAGATTAATCCTTGTCCTGGCTAATGGCTCAATATTGAATCTCAATCAAAAAtcctttttagtccaggactaggtatAATTTTTGTCTTGGAAACTGCCCCTAAAATCCCCaaacatctaaactggaacaagaCTGCCTTAGAAAAACTGCCAGACCGTCTGGTGGACACTCTGGTTGACAGCCAGTGAAATGTGACTGTTTGATGATTTGGTGTGATATTCAAGTGCGATATTCAACACATTGTAAATAAATACGCCTTTTATTATTGCTTTAGTAATATTTTATATGATTGAATAAGAATTATACACAACCCCAACATGGTTTAATAAAATGTCATTGAGGAGCCTTTTTCAACATGA
>XM_036977732.1
cgagagaggcaggttgaggtttccagggttatagtagtgcagaggttgtcatatgctgaggcagtgaagaaagtagggGAAGAAGGGTCaaggatcctgagaggagtggtgtgagtagatCGGTACCAATACAGAGGGATAAACCAACAAGTGATATATGTTTCAGttagcatttatagcaatggttatgaactgtactgcagggatggaatgtAAGTCGCAGAAAATTGAGGTTGCGGTGGCAGatgcagagaggtatttgggtgtgcgagactgaacgtcagaagagttacagggtgtgttaagtggtggtgtcccatcctttcaggctGTTGGCCTGAAGTAGGACTAAATATATTTAAACATTGGAGTATGCTGTTTTTTGTGAGTGCAGTGTTAGATAGTAgggtatttgtttatttgtttaaaaaaattaaagcAAAGTTATAAAGCagttatactccagtctagtaggtggctgtaatgcaacatttattggatgccaaccaccATTAAACCTcatcaaagaagaagaaaaatttATTTCGCGGAACTATACAATCCAACGACACTTCCTGCACGGACCCAATTTGCTGTGAACAGGAGTAATCATGGCGTTCAACTTTGGCGGCGCTGCCACCAACCCAGCAAGTCTTGCAGTCCCTGGTTTCGGGACCACCACCACTGCTGCGGCCCCCGCTGGCTTCGGCGGCTTCGGCACCACCACCACAGGAGGACTGTTTGGTAATACCCAGAATAAGGGATTTGGGTTCTCCTCTGGGCTGGGCACTGGCACTACTGCTGCAGCTGGGTTTGGAACAGGTCTGGGGACAACTCTAGGAGGTGGATTTGGTGGCTTCAATATCCAGCCACAGCAGCAACAGCAAGGAAGCTTTTTTGGGCAGCAGGCCCAGGCCCCGGCCCAGTCTAATCAGCTCGTCCACACAGCTAACGCCCTGTCTGCCCCCACCCTGCTTGGGGACGAGAGAGATGCCATCTTGGCCAAGTGGAATCAGCTCCAGGCCTTCTGGGGAACAGGCAAGGGCTATTTCAACAACCAACTCCCCCCTGTAGACTTCACACAGGAGAACCCTTTCTGCAGGTTCAAGGCGGTGGGCTACAGCTGTATCCCAGGCAGTAAGGATGAGGATGGTCTGGTTGTCCTGGCCTTCAATAAGAAGGAGGCTGATGTTCGTAGCCAACAGCAGCAGCTGGTTGAGTCTCTACACAAGGTGCTGGGAGGGAACCAGACTCTCACCGTCAACGTAGAGGGAGTCAAAGCCCTGCCTGATGACCAGACGGAGGTGGTGATCTATGTGGTGGAGCGTTCTCCTAACGGCACATCTAAGAGGATCCCAGCTACAACATTGTACAGCTATGTAGAGCAGGCTAACACTAAGGCCCAGCTCACACAGCTAGCAGTTTTCATGTCTGTTACACGCACTGAGCTCTCACCAGCACAGCTCAAACAGCTGCTGGCGAATGCACCAGCAGGAGTGGATCCCATCATTTGGGAACAGGCAAAGGTGGATAACCCTGATGCGGACAAGTTGATCCCCGTCCCCATGGTTGGTTTCAAAGAACTACTCCGCAGACTGAAGATTCAGGACCAGATGACCAAACAGCACCAGTCCAGAGTAGACATCATCTCTAATGACATCAGTGAACTGCAGAAGAACCAGGCAACAACAGTGGCTAAGATCGCTCAATACAAGAGGAAGCTGATGGATCTCTCTCACAGAGTACTACAGgtgctGATCAAGCAGGAGATTCAGAGGAAGAGTGGCTATGCCATCCAGGTAGATGAGGAGCACCTAAGAGTGCAGCTGGACACCATCCAGTGTGAACTCAATGCCCCCACGCAGTTTAAGGGGCGTCTGAACGAGCTGATGTCTCAGATCCGGATGCAGAACCACTTTGGGGCGGTGCGCTCAGAGGAACGATATAGTGTGGACGGAGACCTTCTCCGAGAGATCAGACAGCACctgaagcagcagcaggagggtCTGAGTCAGCTTATCAGTGTGATCAAAGATGACGTGGAAGACATCAAACTGATAGAACATGGCCTCCTGGACAGACTCGGCTGACCTCAAAGGTCCTCCCAGGCCCCACGtgaccctgaatctctctctcactgctgaCAAAAGTTAAAGGTTTATGCCTCTTCTTAGCAAGGCATATATCTGTATTTTctatggtctgtctgtcttcaatTCAGAGGTGCTTTCTCACACAGATTAATCCTTGTCCTGGCTAATGGCTCAATATTGAATCTCAATCAAAAAtcctttttagtccaggactaggtatAATTTTTGTCTTGGAAACTGCCCCTAAAATCCCCaaacatctaaactggaacaagaCTGCCTTAGAAAAACTGCCAGACCGTCTGGTGGACACTCTGGTTGACAGCCAGTGAAATGTGACTGTTTGATGATTTGGTGTGATATTCAAGTGCGATATTCAACACATTGTAAATAAATACGCCTTTTATTATTGCTTTAGTAATATTTTATATGATTGAATAAGAATTATACACAACCCCAACATGGTTTAATAAAATGTCATTGAGGAGCCTTTTTCAACATGA
>XM_021603201.2
gcgagagaggcaggttgaggtttccagggttatagtagtgcagaggttgtcatatgctgaggcagtgaagaaagtagggGAAGAAGGGTCaaggatcctgagaggagtggtgtgagtagatCGGTACCAATACAGAGGGATAAACCAACAAGTGATATATGTTTCAGttagcatttatagcaatggttatgaactgtactgcagggatggaatgtAAGTCGCAGAAAATTGAGGTTGCGGTGGCAGatgcagagaggtatttgggtgtgcgagactgaacgtcagaagagttacagggtgtgttaagtggtggtgtcccatcctttcaggctGTTGGCCTGAAGTAGGACTAAATATATTTAAACATTGGAGTATGCTGTTTTTTGTGAGTGCAGTGTTAGATAGTAgggtatttgtttatttgtttaaaaaaattaaagcAAAGTTATAAAGCagttatactccagtctagtaggtggctgtaatgcaacatttattggatgccaaccaccATTAAACCTcatcaaagaagaagaaaaatttATTTCGCGGAACTATACAATCCAACGACACTTCCTGCACGGACCCAATTTGCTGTGAACAGGAGTAATCATGGCGTTCAACTTTGGCGGCGCTGCCACCAACCCAGCAACAGGTCTTGCAGTCCCTGGTTTCGGGACCACCACCACTGCTGCGGCCCCCGCTGGCTTCGGCGGCTTCGGCACCACCACCACAGGATTTGGGGGGCTAGGAGCCGGGAGCACCACGTCTGGTGCTTTTGGGGGTTTTGGGACAACCACTACATCCGCTGCTGCGCCTGGGTCAACTTTCAGCTTCGCCGCTCCTGCAAGCACAACAGGAGGACTGTTTGGTAATACCCAGAATAAGGGATTTGGGTTCTCCTCTGGGCTGGGCACTGGCACTACTGCTGCAGCTGGGTTTGGAACAGGTCTGGGGACAACTCTAGGAGGTGGATTTGGTGGCTTCAATATCCAGCCACAGCAGCAACAGCAAGCTAACGCCCTGTCTGCCCCCACCCTGCTTGGGGACGAGAGAGATGCCATCTTGGCCAAGTGGAATCAGCTCCAGGCCTTCTGGGGAACAGGCAAGGGCTATTTCAACAACCAACTCCCCCCTGTAGACTTCACACAGGAGAACCCTTTCTGCAGGTTCAAGGCGGTGGGCTACAGCTGTATCCCAGGCAGTAAGGATGAGGATGGTCTGGTTGTCCTGGCCTTCAATAAGAAGGAGGCTGATGTTCGTAGCCAACAGCAGCAGCTGGTTGAGTCTCTACACAAGGTGCTGGGAGGGAACCAGACTCTCACCGTCAACGTAGAGGGAGTCAAAGCCCTGCCTGATGACCAGACGGAGGTGGTGATCTATGTGGTGGAGCGTTCTCCTAACGGCACATCTAAGAGGATCCCAGCTACAACATTGTACAGCTATGTAGAGCAGGCTAACACTAAGGCCCAGCTCACACAGCTAGCAGTTTTCATGTCTGTTACACGCACTGAGCTCTCACCAGCACAGCTCAAACAGCTGCTGGCGAATGCACCAGCAGGAGTGGATCCCATCATTTGGGAACAGGCAAAGGTGGATAACCCTGATGCGGACAAGTTGATCCCCGTCCCCATGGTTGGTTTCAAAGAACTACTCCGCAGACTGAAGATTCAGGACCAGATGACCAAACAGCACCAGTCCAGAGTAGACATCATCTCTAATGACATCAGTGAACTGCAGAAGAACCAGGCAACAACAGTGGCTAAGATCGCTCAATACAAGAGGAAGCTGATGGATCTCTCTCACAGAGTACTACAGgtgctGATCAAGCAGGAGATTCAGAGGAAGAGTGGCTATGCCATCCAGGTAGATGAGGAGCACCTAAGAGTGCAGCTGGACACCATCCAGTGTGAACTCAATGCCCCCACGCAGTTTAAGGGGCGTCTGAACGAGCTGATGTCTCAGATCCGGATGCAGAACCACTTTGGGGCGGTGCGCTCAGAGGAACGATATAGTGTGGACGGAGACCTTCTCCGAGAGATCAGACAGCACctgaagcagcagcaggagggtCTGAGTCAGCTTATCAGTGTGATCAAAGATGACGTGGAAGACATCAAACTGATAGAACATGGCCTCCTGGACAGACTCGGCTGACCTCAAAGGTCCTCCCAGGCCCCACGtgaccctgaatctctctctcactgctgaCAAAAGTTAAAGGTTTATGCCTCTTCTTAGCAAGGCATATATCTGTATTTTctatggtctgtctgtcttcaatTCAGAGGTGCTTTCTCACACAGATTAATCCTTGTCCTGGCTAATGGCTCAATATTGAATCTCAATCAAAAAtcctttttagtccaggactaggtatAATTTTTGTCTTGGAAACTGCCCCTAAAATCCCCaaacatctaaactggaacaagaCTGCCTTAGAAAAACTGCCAGACCGTCTGGTGGACACTCTGGTTGACAGCCAGTGAAATGTGACTGTTTGATGATTTGGTGTGATATTCAAGTGCGATATTCAACACATTGTAAATAAATACGCCTTTTATTATTGCTTTAGTAATATTTTATATGATTGAATAAGAATTATACACAACCCCAACATGGTTTAATAAAATGTCATTGAGGAGCCTTTTTCAACATGA

Function

symbol description
nup54 Acts upstream of or within several processes, including digestive system development; dorsal/ventral pattern formation; and liver development. Predicted to be located in nucleus. Predicted to be part of nuclear pore. Is expressed in ovary. Orthologous to human NUP54 (nucleoporin 54).

NR:

description
nucleoporin p54 isoform X3

GO:

id name namespace
GO:0005643 nuclear pore cellular_component

KEGG:

id description
K14308 NUP54, NUP57; nuclear pore complex protein Nup54

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603200.2 False 2685 mRNA 0.49 13 48106327 48125676
XM_021603199.2 False 2722 mRNA 0.49 14 48106327 48125677
XM_021603202.2 False 2626 mRNA 0.48 13 48106327 48125677
XM_021603203.2 False 2599 mRNA 0.48 12 48106327 48125677
XM_036977729.1 False 2719 mRNA 0.49 14 48106327 48125677
XM_036977730.1 False 2683 mRNA 0.49 13 48106327 48125677
XM_036977732.1 False 2596 mRNA 0.48 12 48106327 48125677
XM_021603201.2 True 2663 mRNA 0.49 14 48106327 48125678

Neighbor

gene id symbol gene type direction distance location
LOC110523978 LOC106605670 coding downstream 76651 48027781 ~ 48029676 (-)
LOC110523975 NA coding downstream 196082 47826801 ~ 47910245 (-)
LOC118964754 NA coding downstream 410645 47695630 ~ 47695682 (-)
LOC110523973 ctif coding downstream 443657 47530422 ~ 47662670 (-)
add1 LOC106561289 coding downstream 888683 47163745 ~ 47217644 (-)
LOC110523983 LOC106560666 coding upstream 299187 48423554 ~ 48489102 (-)
pdcl pdcl coding upstream 414404 48540082 ~ 48544432 (-)
pdxp plpp coding upstream 449072 48574750 ~ 48580663 (-)
mier3a LOC105008092 coding upstream 521228 48646906 ~ 48693022 (-)
LOC110523989 LOC106560554 coding upstream 604305 48729983 ~ 48847550 (-)
G408591 NA non-coding downstream 3758 48100332 ~ 48102569 (-)
G408560 NA non-coding downstream 38256 48054088 ~ 48068071 (-)
G408561 NA non-coding downstream 46982 48056814 ~ 48059345 (-)
G408554 NA non-coding downstream 98294 48007689 ~ 48008033 (-)
G408553 NA non-coding downstream 101216 48004660 ~ 48005111 (-)
G408623 LOC106560682 non-coding upstream 37912 48163590 ~ 48164373 (-)
G408662 NA non-coding upstream 91794 48217472 ~ 48218065 (-)
G408663 NA non-coding upstream 92448 48218126 ~ 48218459 (-)
G408666 NA non-coding upstream 94596 48220274 ~ 48220492 (-)
G408665 NA non-coding upstream 97622 48223300 ~ 48226856 (-)
LOC110523962 LOC106561388 other downstream 1496212 46572673 ~ 46610314 (-)
G406588 NA other downstream 1871790 46219667 ~ 46234537 (-)
LOC110523950 LOC106561514 other downstream 2082487 46019698 ~ 46023840 (-)
G406076 LOC100136563 other downstream 2116844 45977280 ~ 45989483 (-)
G405889 LOC106561608 other downstream 2493372 45612428 ~ 45612955 (-)
G408664 NA other upstream 96274 48221952 ~ 48223220 (-)
G408782 sec16a other upstream 227624 48353302 ~ 48357565 (-)
G410168 NA other upstream 1408238 49533916 ~ 49576456 (-)
G411459 NA other upstream 2493213 50618891 ~ 50619175 (-)
G411929 NA other upstream 2596636 50722314 ~ 50723061 (-)

Expression


Co-expression Network