pdxp (plpp)


Basic Information

Item Value
gene id pdxp
gene name plpp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 48574750 ~ 48580663 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603223.2
CTATGCGGTGACGTCCCTGGAACCGGGACACATTATTCCTCTACCAATGTGGTTTAGCCGCTCATTAACTGTAACGGGCAAGTTTCACTGTTTTGACTGTCTCCACAAGTTGTCAGGAGAGTTACATGTAACTCAATGTTGTAAACGGTAATCGCCGGTCAATAGGCCAAATGGTTAAAGAGGAAGCGCCGTGTTATTGCAAAATATGCTTGGTGGGTGGGTCTTAAATGCCAGCGCCAATGAAACGAATAGAATGAGCTGTATAAAAGACGGGGACGTTTCAGTTTCATGTAATATAATTGCCATTTATCACCGTTGTACAAAAGTGTGGTGGAACTAGAATTACAGGGAACTGTCGTAGTTCGTTCTATTTGAGTGGCGTAATCATATATTTCTGTAGACAACTACGCGCGAGGTTGTTCCTCAACGCATCGTTCACAATGGCTGGGCTGGTGAGTAGCAGAGGGTGTCACAAAATCAGGGGTTCCCAAATAAGAGAGCTCCTCGACTCCAAGCTCAACGTCCTTTTTGATTGCGACGGAGTCATCTGGAATGGCGAAACGGTAGTGGCAGGCGCGCCAGAAGTGGTGACGCTACTGAAACAGCAAGGCAAAAAGGTATTTTTCATCACCAACAACTGTACTAGGCCCAGAGCGAGCTACGTGACGAAGTTTATCCGGTTGGGCTTCACTGATGTCGCAGAGGAGGAGATCTTCAGCTCGGCGTACTGCTCTGCGGCTTATCTGCGAGACGTGGCGAAGTTGCAGGGTAAGGTGTATGTCATAGGGTGCCAGGGCGTTGTGAAGGAGCTACGGGAGGCTGGGGTTCCCATAGTGGAGGAGGACACTAACGCACCCACTGGGACCATTTACGACTACCCGTTGGACCCAGAAGTAAAGGCAGTGCTGGTGGGATATGACGAGAAATTTGATTTCATAAAACTGGCCAAAGCCTGCTGCTACTTACAGAATACTGAGTGCCTGTTTCTGGCCACTGATCCTGACCCTTGGCACCCACTGCGAGGAGGCAGAATAACACCAGGTTCAGGAAGCCTCACGGCGGCTGTGGAGACAGCCAGCAGCAGGAAAGCCACGGTGATCGGGAAGCCCAGCTGCTTCATGTTCGAGTGCATCGCCAGCCAGTTCAACCTGGACCCCGGCCAGTCCCTCATGGTGGGTGACCGCCTGGAGACTGACATCCTGTTTGGGGCTAACTGTGGCCTGGACACCATGCTCACCCTGACCGGAGTGTCCACTCTAGAGGAGGCGCACGGCTACAAGGACAGTGACGACCCCGAGCGGAAGGACTTCGTGCCAGATTACGTGGTGGAGACCATTGCCGATTTCATTGAAGCgtatgaagaggaggaaggctgagGAGGACTATAGAAAGAGGAGACCCCTGAAGCTGTGCCTGAGagacctgggtcatgttcattagagtACGCAACGGAAAGCGTTTTAAACCGCTTTGCAACGGAAAGTGAAAATTCCCTCCCTGTTTCaatccatttggtgcctaatgaacacgaccctggatATATCAGAAAAGGGATTCGTTTGGTGGTGTTATAAGCAGTCATTTGTAAAGCCTTTAAGAAGTCAGTGTGATGTGTTATAGTGCTTGTGACAGGCATGCTGTGCTTTTTATGCCAATAATCTTTGTCATGAGGCATGTAAAGATGTGGCATAACATTTTGGAAATGTTTTTGCAATTTACATGCTTATGGCAAGTGATAATGACATTGACCAGGATGCAATCAGAGATGTGTTGTAGACGAGCCCATTTCACTACAATGAAGATCGCGTTCACGGTAAAACGCTGAAGATGTCAACTCATGAGGAAATTATCTTTTAAATGTCAAGCACTGTGCACTTGTATACAACATGTCTTTGATTGAGTCCAGGCCATTGTGTAGTATTTTGGAAAGCTTTATGAATGGTGGCATAAGACCACCTGGAACATTATATACTGACACCAATAATGCAGTGTGAGACTCCACCTGGTTGTAGTTCCTAGTGTTCATTATTTGGGACATTTATTGGTGTAGTAGGAATGTCTTTGGTTGTACTGTAGTATAGCATAGACGTCACCATATGAGCCCAATATACAAGCTGTTCTATTTTCCTTGAGACCATCCAGTGTTGAAATGGATAGGGATCCATCAAAGCGAATCATAACACCCAACGTAAATGGACTGAAGTCATCTAAACTCACAGAGCCAACTGTGCTGTTCCACAGTCAAAACATAAGATAACGTAAGCTGAAAGCTTCCCTTGCAGCACCTTCATCTTTAGTATACCAAACCAAATACTGTGTTAGGTTTGAATCCAACAACTGGTATACCAAACCAAATGTTGTTTTTAGAGCCAACTGTCCAACATTTAGCTCTGGATATATGGAAATAGGGCTGGAGAATTGGTTTGCTGGAAATATGGATAAAATACTTGGTTTGATATTGGTTAGTTTTCCCACCAAGTCAAACCTTTGTTAATGTGTGCCAGCAGCCTTGCTGTAGTTTTGGATCCTTTGGTCAATGAATCCTTGACTGTAACAAATATGACATGGAAATTGTTCTCACTTCTCACCTTTCTAAAGAACAGAGCATACGAGTGGTCCTGAATTAATCATTACCAACAATGAAATGTGTAGGACTGTATGTAGATCCAATGACCTTTTGATAAGCCTTCTACTGATCTATTCTACAAGTAATAATATTTGAATAGAACTTCAAGGGATACCAATGTTCAATGAACTGAAATGTGAATTTGCAGTGGAAAATATTGTACAGTAGTTTGGTATTTGAAAGTCAAAAAGGAACTAGTATTTTCCTTAACCATACCACTGTAGAATGTTAAGTAGCTGAAATGTTAACTATTAGGTGTATTTGGGAACTGGATTTTCAATGGTTTTTTTATCGACAGGTGGTTATTAACCTGAAGAAGGGTGTGTGGATTTCAGTCAGGGTAATAACAAGAATGGCAGACAAACATTATTTTAATTGAGGGTAtcaccatttttttttatcagtCTTTTTACTTAGCTGGAGGTTGTGCTAGAATTTTATTGTAAGACTTAAGACACATTTTCATACTGTAGATGAAGTACCTATTTCAATGGAATGCCAACCTGTTTTGTATGAACTTCAGACATTCTGCATATTGTGAATTAGGTTTGTACATTACTTAATGTAGTGTACAATtgcattttgtttttttaattaaaacTCTTGCTTTGTATAA

Function

NR:

description
pyridoxal phosphate phosphatase-like

GO:

id name namespace
GO:0016311 dephosphorylation biological_process
GO:0016791 phosphatase activity molecular_function

KEGG:

id description
K07758 PDXP; pyridoxal phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603223.2 True 3242 mRNA 0.43 2 48574750 48580663

Neighbor

gene id symbol gene type direction distance location
pdcl pdcl coding downstream 30318 48540082 ~ 48544432 (-)
LOC110523983 LOC106560666 coding downstream 126862 48423554 ~ 48489102 (-)
nup54 nup54 coding downstream 449072 48106327 ~ 48125678 (-)
LOC110523978 LOC106605670 coding downstream 545074 48027781 ~ 48029676 (-)
LOC110523975 NA coding downstream 664505 47826801 ~ 47910245 (-)
mier3a LOC105008092 coding upstream 66243 48646906 ~ 48693022 (-)
LOC110523989 LOC106560554 coding upstream 149320 48729983 ~ 48847550 (-)
notch1 notch1 coding upstream 300730 48881393 ~ 48954869 (-)
col27a1a LOC106560409 coding upstream 507872 49088535 ~ 49370988 (-)
LOC110523994 rax coding upstream 1077323 49657986 ~ 49663582 (-)
G408895 NA non-coding downstream 21551 48552887 ~ 48553199 (-)
G408894 NA non-coding downstream 22282 48552224 ~ 48552468 (-)
G408891 NA non-coding downstream 29385 48545069 ~ 48545365 (-)
G408856 NA non-coding downstream 37710 48532422 ~ 48537040 (-)
G408875 NA non-coding downstream 60920 48513620 ~ 48513830 (-)
G408912 NA non-coding upstream 4764 48585427 ~ 48585672 (-)
G408914 NA non-coding upstream 5859 48586522 ~ 48586734 (-)
G408916 NA non-coding upstream 6796 48587459 ~ 48587782 (-)
G409219 NA non-coding upstream 24990 48605653 ~ 48606623 (-)
G409218 NA non-coding upstream 60551 48641214 ~ 48645375 (-)
G408782 sec16a other downstream 217185 48353302 ~ 48357565 (-)
G408664 NA other downstream 351530 48221952 ~ 48223220 (-)
LOC110523962 LOC106561388 other downstream 1964635 46572673 ~ 46610314 (-)
G406588 NA other downstream 2340213 46219667 ~ 46234537 (-)
LOC110523950 LOC106561514 other downstream 2550910 46019698 ~ 46023840 (-)
G410168 NA other upstream 953253 49533916 ~ 49576456 (-)
G411459 NA other upstream 2038228 50618891 ~ 50619175 (-)
G411929 NA other upstream 2141651 50722314 ~ 50723061 (-)
G411930 NA other upstream 2142496 50723159 ~ 50724077 (-)
LOC110524003 LOC106613485 other upstream 2599095 51179758 ~ 51228505 (-)

Expression


Co-expression Network