Gene
RNA
| Item | Value |
|---|---|
| gene id | setd9 |
| gene name | setd9 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48609741 ~ 48641668 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| setd9 | Orthologous to human SETD9 (SET domain containing 9). |
| description |
|---|
| SET domain-containing protein 9 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021603226.2 | False | 1691 | mRNA | 0.45 | 7 | 48609741 | 48641668 |
| XM_021603227.2 | False | 1420 | mRNA | 0.44 | 7 | 48609743 | 48641668 |
| XM_036977746.1 | False | 1866 | mRNA | 0.45 | 8 | 48609743 | 48641668 |
| XM_036977748.1 | False | 1435 | mRNA | 0.44 | 8 | 48609905 | 48641668 |
| XM_021603224.2 | False | 1493 | mRNA | 0.44 | 8 | 48610660 | 48641668 |
| TU463921 | False | 833 | lncRNA | 0.44 | 1 | 48609756 | 48610588 |
| TU463909 | True | 691 | TUCP | 0.41 | 3 | 48627030 | 48641615 |
48,580,000
48,584,000
48,588,000
48,592,000
48,596,000
48,600,000
48,604,000
48,608,000
48,612,000
48,616,000
48,620,000
48,624,000
48,628,000
48,632,000
48,636,000
48,640,000
48,644,000
48,648,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964615 | LOC106560613 | coding | upstream | 37323 | 48570174 ~ 48575010 (+) |
| rpl28 | rl28 | coding | upstream | 122858 | 48478571 ~ 48486883 (+) |
| sec16a | sec16a | coding | upstream | 184788 | 48351423 ~ 48424953 (+) |
| LOC110523980 | LOC106560682 | coding | upstream | 387846 | 48149869 ~ 48221948 (+) |
| LOC110522955 | ppef2 | coding | upstream | 503509 | 48096019 ~ 48106232 (+) |
| psmd5 | psmd5 | coding | downstream | 860493 | 49502161 ~ 49514445 (+) |
| LOC110522957 | LOC106613948 | coding | downstream | 880185 | 49521853 ~ 49523453 (+) |
| LOC110523995 | LOC106560436 | coding | downstream | 1052555 | 49694223 ~ 49732545 (+) |
| LOC110522958 | LOC106560427 | coding | downstream | 1094978 | 49736646 ~ 49742830 (+) |
| LOC110523996 | hcn1 | coding | downstream | 1247849 | 49889400 ~ 50073258 (+) |
| G408946 | NA | non-coding | upstream | 3365 | 48606090 ~ 48606376 (+) |
| G408772 | NA | non-coding | upstream | 50928 | 48558582 ~ 48558813 (+) |
| G408769 | NA | non-coding | upstream | 53737 | 48555791 ~ 48556004 (+) |
| G408767 | NA | non-coding | upstream | 58087 | 48551346 ~ 48551654 (+) |
| G409075 | NA | non-coding | downstream | 144986 | 48786654 ~ 48794062 (+) |
| G409077 | NA | non-coding | downstream | 147522 | 48789190 ~ 48796583 (+) |
| G409432 | NA | non-coding | downstream | 356028 | 48997696 ~ 48998137 (+) |
| G409454 | NA | non-coding | downstream | 387900 | 49029568 ~ 49029930 (+) |
| G409462 | NA | non-coding | downstream | 400272 | 49041940 ~ 49042152 (+) |
| G408222 | NA | other | upstream | 570648 | 48036626 ~ 48039093 (+) |
| G408177 | NA | other | upstream | 782266 | 47821590 ~ 47827475 (+) |
| G408135 | NA | other | upstream | 855547 | 47748813 ~ 47754194 (+) |
| G407442 | NA | other | upstream | 1158595 | 47450799 ~ 47451146 (+) |
| G409191 | NA | other | downstream | 306470 | 48948138 ~ 48981771 (+) |
| G411519 | NA | other | downstream | 2021204 | 50662872 ~ 50663640 (+) |
| camsap2a | camsap2 | other | downstream | 2488696 | 51059834 ~ 51153381 (+) |
| G412859 | NA | other | downstream | 3160582 | 51802250 ~ 51802820 (+) |
| setd9 | setd9 | other | downstream | 16442 | 48609741 ~ 48641668 (+) |
