Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110522957 |
| gene name | LOC106613948 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 49521853 ~ 49523453 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase LOC100288842 |
| id | name | namespace |
|---|---|---|
| GO:0006486 | protein glycosylation | biological_process |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008378 | galactosyltransferase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021601390.1 | True | 1098 | mRNA | 0.56 | 3 | 49521853 | 49523453 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psmd5 | psmd5 | coding | upstream | 7408 | 49502161 ~ 49514445 (+) |
| setd9 | setd9 | coding | upstream | 880185 | 48609741 ~ 48641668 (+) |
| LOC118964615 | LOC106560613 | coding | upstream | 949435 | 48570174 ~ 48575010 (+) |
| rpl28 | rl28 | coding | upstream | 1034970 | 48478571 ~ 48486883 (+) |
| sec16a | sec16a | coding | upstream | 1096900 | 48351423 ~ 48424953 (+) |
| LOC110523995 | LOC106560436 | coding | downstream | 170770 | 49694223 ~ 49732545 (+) |
| LOC110522958 | LOC106560427 | coding | downstream | 213193 | 49736646 ~ 49742830 (+) |
| LOC110523996 | hcn1 | coding | downstream | 366064 | 49889400 ~ 50073258 (+) |
| nr5a2 | LOC106613481 | coding | downstream | 1205649 | 50729102 ~ 50825399 (+) |
| camsap2a | camsap2 | coding | downstream | 1536381 | 51059834 ~ 51153381 (+) |
| G409734 | NA | non-coding | upstream | 86006 | 49428331 ~ 49435847 (+) |
| G409667 | NA | non-coding | upstream | 180894 | 49335296 ~ 49340959 (+) |
| G409664 | NA | non-coding | upstream | 191219 | 49330338 ~ 49330634 (+) |
| G409494 | NA | non-coding | upstream | 415844 | 49085164 ~ 49106009 (+) |
| G409471 | NA | non-coding | upstream | 470348 | 49051270 ~ 49051505 (+) |
| G409792 | NA | non-coding | downstream | 20634 | 49544087 ~ 49544669 (+) |
| G409838 | NA | non-coding | downstream | 124988 | 49648441 ~ 49648853 (+) |
| G410343 | NA | non-coding | downstream | 216556 | 49740009 ~ 49740271 (+) |
| G410556 | NA | non-coding | downstream | 442028 | 49965481 ~ 49965926 (+) |
| G410561 | NA | non-coding | downstream | 449498 | 49972951 ~ 49973288 (+) |
| G409191 | NA | other | upstream | 540082 | 48948138 ~ 48981771 (+) |
| LOC110523980 | LOC106560682 | other | upstream | 1357966 | 48149869 ~ 48221948 (+) |
| G408222 | NA | other | upstream | 1482760 | 48036626 ~ 48039093 (+) |
| G408177 | NA | other | upstream | 1694378 | 47821590 ~ 47827475 (+) |
| G411519 | NA | other | downstream | 1139419 | 50662872 ~ 50663640 (+) |
| G412859 | NA | other | downstream | 2278797 | 51802250 ~ 51802820 (+) |
| G414007 | NA | other | downstream | 3237936 | 52761389 ~ 52761729 (+) |
