Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110524009 |
| gene name | LOC106613493 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 51692900 ~ 51709944 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 5-hydroxytryptamine receptor 2B-like |
| id | description |
|---|---|
| K04157 | HTR2; 5-hydroxytryptamine receptor 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021603282.2 | False | 4051 | mRNA | 0.45 | 4 | 51692900 | 51709944 |
| XM_021603283.2 | True | 4087 | mRNA | 0.45 | 4 | 51693225 | 51709944 |
51,688,000
51,690,000
51,692,000
51,694,000
51,696,000
51,698,000
51,700,000
51,702,000
51,704,000
51,706,000
51,708,000
51,710,000
51,712,000
51,714,000
51,716,000
51,718,000
51,720,000
51,722,000
51,724,000
51,726,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522961 | LOC106613490 | coding | upstream | 132407 | 51436948 ~ 51612163 (+) |
| LOC110524007 | LOC106613489 | coding | upstream | 257409 | 51419430 ~ 51435491 (+) |
| LOC118964752 | NA | coding | upstream | 297269 | 51395577 ~ 51395631 (+) |
| LOC110524004 | LOC106613487 | coding | upstream | 401146 | 51283536 ~ 51291754 (+) |
| camsap2a | camsap2 | coding | upstream | 554516 | 51059834 ~ 51153381 (+) |
| LOC110524010 | LOC106613494 | coding | downstream | 303623 | 52013567 ~ 52031827 (+) |
| LOC110524011 | LOC106613497 | coding | downstream | 396624 | 52106568 ~ 52109717 (+) |
| LOC110524014 | gnb4 | coding | downstream | 437220 | 52147164 ~ 52168561 (+) |
| plaat1 | LOC106613501 | coding | downstream | 512884 | 52222828 ~ 52230021 (+) |
| LOC110524017 | ftsj3 | coding | downstream | 520151 | 52230095 ~ 52235296 (+) |
| G412636 | NA | non-coding | upstream | 72270 | 51620358 ~ 51620630 (+) |
| G412485 | NA | non-coding | upstream | 74449 | 51618027 ~ 51618451 (+) |
| G412486 | NA | non-coding | upstream | 76601 | 51613325 ~ 51616299 (+) |
| G412523 | NA | non-coding | upstream | 86421 | 51602547 ~ 51606479 (+) |
| G412786 | NA | non-coding | downstream | 26183 | 51736127 ~ 51736403 (+) |
| G412833 | LOC107579696 | non-coding | downstream | 72689 | 51782633 ~ 51783633 (+) |
| G412861 | NA | non-coding | downstream | 94635 | 51804579 ~ 51817658 (+) |
| G412888 | NA | non-coding | downstream | 118175 | 51828119 ~ 51828462 (+) |
| G412892 | NA | non-coding | downstream | 128516 | 51838460 ~ 51838764 (+) |
| G411519 | NA | other | upstream | 1029260 | 50662872 ~ 50663640 (+) |
| LOC110523996 | hcn1 | other | upstream | 1769302 | 49889400 ~ 50073258 (+) |
| G409191 | NA | other | upstream | 2711129 | 48948138 ~ 48981771 (+) |
| setd9 | setd9 | other | upstream | 3051285 | 48609741 ~ 48641668 (+) |
| G412859 | NA | other | downstream | 92306 | 51802250 ~ 51802820 (+) |
| G414007 | NA | other | downstream | 1051445 | 52761389 ~ 52761729 (+) |
| G414041 | NA | other | downstream | 1068573 | 52778517 ~ 52779479 (+) |
| G414488 | LOC106562530 | other | downstream | 1402239 | 53112183 ~ 53112507 (+) |
| G415582 | LOC106584099 | other | downstream | 2467985 | 54177929 ~ 54183430 (+) |
