LOC110524026 (LOC106613510)


Basic Information

Item Value
gene id LOC110524026
gene name LOC106613510
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 53334333 ~ 53376599 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036977816.1
GAGAGGCACACGGAGATGAGGGCAGCTGCAATGTGGATTCAAGTGCGCACCATGGATGGCAAGGAGACTCATCGGATTGACTCACTGTCCAAGCTCACCAAGGTGGATGAGCTGCGCCTCAAGATCTCGGAGCTCTTCAAGGTTGAGCCAGAAAGACAGAGGCTCTTTTACCGGGGCAAGCAGATGGAGGATAGCCACACCATCTTTGATTACAACGTGGGGCTGAATGATATAGTGCAGCTCCTTGTTAGACAGGCTACGCCCCCTGCCGCTGTCCTCAAGAGCAAGGACAAAGAAGCCGAgctctctgactctgactctggctgTGGCTCGGCACAGAGCGAGTCGGACAAGAGCTCGACCCACTCTGAGGCAGAGGTGCAAGCAGCCGGAACCTCTGCCCAAACAGACACACCAGACCTGGTTGACCCGGGATTTGGCTTTTACAAGatgaATGAGTTTGTTGACGCCAGAGACTTGAACATGGGCGCCTGGTTTGAGGCCCAGATTGTGAACATTACAAAGACCACAAAGACACCTGGAGAGGAAGAGGGCTCTGACTCTAAACCTGGCGAAGAGGAAGTTATTCACTACCATGTCAAATATGAAGActacccAGAGAACGGAGTGGTGCCTCTGCAGTCCAAGGATGTACGCCCACGCGCCCGCACAGTCTACCAGTGGCACCAGCTGGAGGCGGGCATGGTGGTCATGGTAAACTTCAACCCAGACGAACCCAAAGAGCGCGGCTACTGGTACGACGCCCAGATCCAGAAGAAGAGGGAGACACGCACTGTGCACGAGATCTACGCCAAAATACTGCTGGGGGTTGCCGGTGACTCCCTAAACGACTGTCGCATCATGTTCTTGACTGAGATCTACAAAATCGAGGAGCCTGGAGCCTTGGATGGATCCGGAGCGGGATCTGATAGCCCATTGAAAAGGTCAAACGGACCCGAGTGCAAACACTGCAAAGATGACCCCAAGAAGAACTGCCGCTGGTGCAACTGCCATGTATGTGGCGTGAAGCAGGACCCGGACAAGCAGCTGCTGTGTGACGAGTGTGACATGGCATTCCACATCTACTGCCTCAACCCCCGACTGACCAGCCTCCCCGATGACGACGACTGGTATTGTCCCGAGTGCCGCAACGATGCTAGTGAGGTGGTGCTAGCAGGAGAGAAACTCAAGGACAGCAAGAAGAAATCCAAGATGGCGTCCGCCAGCTCAACCAGCCAGAGGGACTGGGGAAAGGGCATGGCTTGTGTTGGCCGCAGCAAGCAGTGCACCATTGTCCCTTCCAACCACTACGGCCCTGTCCCTGGCGTCCCGGTCGGAAGTATTTGGAAGTTCAGGGTCCAGGTGAGTGAGTCTGGTTGCCACAGGCCACATGTTGCTGGGATCCACGGGAGGAGCAACGATGGAGCTTACTCCTTAGTGCTGGCTGGGGGCTATGAAGACGACCAGGATGACGGCAACGAGTTCACCTACACCGGCTCTGGAGGGCGAGATCTGTCTGGCAACAAGAGGACAGCCGAACAGTCGTGTGATCAGAAGCTCACCAATATGAACAGGGCTCTGGCTCTGAACTGCAACGCATCGGTGAACGAGAAGGATGGGGCCACGGCAAAAGACTGGAAGGCAGGCAAGCCGGTCAGGGTGGTGCGCAGCTCCAAGGGCCGCAAACACAGCAAGTTCAGCCCGGAAGATGGCAACAGATACGACGGAATCTACAAGGTGGTGAAATACTGGCCAGAGAAGGGCAAGTCTGGCTTCCTCGTCTGGAGGTATCTGCTTAAACGAAATGACGACGAGTCAGCGCCATGGACCCGGGACGGCAAGGAACGCATCAAGAAACTGGGACTCACCATGCAGTATCCAGAAGGCTATCTGGAAGCCCAGGCTGCCAAGGAGAAGGAGAACAAGGAGAAGGAGAACGAGGAGGTAACTGAAACACCCACCAAAGGGAAGCGGAAAAGAAAGTCTCAGTCTAATGAAGCTGAAGAGAAGTCATCGCCAGCTAAGGGCACTCCCAAGAAGATGAAGTTGGAGGCTTACAAACTGACCAAAGAACAGAAGGACTGGATCAAGGACGACGAGCCCAACAGGAAGGTGTGGGACGAAGCCATGGAGTCTCTGGCCCTTGGCCCGAAATTCCTGAGCAAAGTCGAGGAGGTTTTCTTGTGTATATGCTGCCAAGAAGTGGTATTTCAACCTATCACCACTGAGTGCCAACACAATGTCTGCAGGgAATGCCTTCACCGGTCTTTCAAGGCAGAGGTGTACTCTTGCCCAGCATGCAGGCACGATCTGGGCAAAAACAACCCAATGAGTGTCAACAAACCCCTCCAAGCCATTCTCAACCAGTTCTTCCCAGGATACAGCAGTGGACGGTGATAACTCGTTCCAGCTGCTTGACCAGCATGTTGACTACATGAACTATGAGGGCAGTTAAGCAGtacaggcaacaacaaaaaacttttcTTAATATAATTAGCAAATGTAAAACGCTGTCTGTTTGGTCGCTGAAATACCACCCCATCTTCTCCAGTCCTATTTGTAACGAACTGTAGCTATGAAACTGCCTTGATCAAATGTATCTAACGTTCTTCTGTAACAATGCATTTTAACTTGACTTGccaaaatcaatacacaagtttAATTCCTTCAAGCACATGCAGTTTTAAGATGTATACGATATGGATACTTTGCAGAACACTTTGTAATAGATTTTAATCAATTGCATACATTTGTATTTAGAAAACACTCCCTTTATAGAATGTATGTTTTATATTCTAAGTTGTATGTCCAATAGTACTGTTCCTAGCTCATGTATTTCATAAGCTAAGCACAACTGATAAATCCGTTGCAACCCTGTTTTGAGAAAATGTCCTCCATATCCCGGGCTTAAGTGAATGTCCTGATCTTAGATTGTGCCTGCCATCGCTCAATGGCAGGTTTTACATGTAGCATCGCGTGTTGCTGCGTCCTTAACAACTTGTGCTTGAGTACATGACTGTGGGCTATAATAGAAGGAATGATGGGTTTGGATTTGATATTGAACCCTAAAGTTATTCTATTTTCTATAGAAATGATTTAGTTGTGGTGGATGTGTTGAATTAATTAACATTCCAGCAATGTCTGTTTactctttcaaaaactgtcattTATTTTGCCATGTGTTATCTGATGGAGTTGCTGAACATTTGATTTAAATTTGAGCAGAGCAAAAATACTCCACAGAAACGTATACCTTTCACTAATCTatgaaatggcagatttttctaTTTTGTAGTAATTATTTCCTAGttgtaaaatgtatttcaccttaaccctttaactgcGGTCTAAGCACACGTTTTCCATCTGAACAAACCCAAAGATGTAAAACCTGTAACCATTGTAGGGTTGAGCACAATTCACCGTTTAGGTGTGCCACAACCTTTTGATTCATGGCAGGGCTGTGGAAAACATCTAGCTCTGTTGAACTTGACCATAGTGGTTCAACAGAAAAATATTTAAGATCCAGAAATTTAATTTAGCTCAATTTCATATTTCTGCTTGTGTTTTATTGCAAAATGAATGCCAGTAGCTGCAGATGTTAGTAATATCCCAAATATTTACAACATTTGCATAGACTGGAAATGTATATTTTCAAATTGTATATGTTTTAGTTGTTTGTAGTTTTAGAAGTAACTTGCTTGCACATGGTTTCCCAAGTGCAGAATTTTCCAATACATCTTCAACCTTTTTATCAAATAAAAATTGCAAAATTGAAATGTTACTGAGATATAAAGAATATAAATGGTGCCTTTTGTTAAATATTATGATTACTGTTGggttttgtgttgtttttttacaatAAATGCATAGAGAACTAA
>XM_036977814.1
TTGGCTACCAACAGAATGGAGCAGAGACCAGGCTTTGAAAATTCAGCTGCGACTACATCGATTTGCATAAGGGCAGCTGCAATGTGGATTCAAGTGCGCACCATGGATGGCAAGGAGACTCATCGGATTGACTCACTGTCCAAGCTCACCAAGGTGGATGAGCTGCGCCTCAAGATCTCGGAGCTCTTCAAGGTTGAGCCAGAAAGACAGAGGCTCTTTTACCGGGGCAAGCAGATGGAGGATAGCCACACCATCTTTGATTACAACGTGGGGCTGAATGATATAGTGCAGCTCCTTGTTAGACAGGCTACGCCCCCTGCCGCTGTCCTCAAGAGCAAGGACAAAGAAGCCGAgctctctgactctgactctggctgTGGCTCGGCACAGAGCGAGTCGGACAAGAGCTCGACCCACTCTGAGGCAGAGGTGCAAGCAGCCGGAACCTCTGCCCAAACAGACACACCAGACCTGGTTGACCCGGGATTTGGCTTTTACAAGatgaATGAGTTTGTTGACGCCAGAGACTTGAACATGGGCGCCTGGTTTGAGGCCCAGATTGTGAACATTACAAAGACCACAAAGACACCTGGAGAGGAAGAGGGCTCTGACTCTAAACCTGGCGAAGAGGAAGTTATTCACTACCATGTCAAATATGAAGActacccAGAGAACGGAGTGGTGCCTCTGCAGTCCAAGGATGTACGCCCACGCGCCCGCACAGTCTACCAGTGGCACCAGCTGGAGGCGGGCATGGTGGTCATGGTAAACTTCAACCCAGACGAACCCAAAGAGCGCGGCTACTGGTACGACGCCCAGATCCAGAAGAAGAGGGAGACACGCACTGTGCACGAGATCTACGCCAAAATACTGCTGGGGGTTGCCGGTGACTCCCTAAACGACTGTCGCATCATGTTCTTGACTGAGATCTACAAAATCGAGGAGCCTGGAGCCTTGGATGGATCCGGAGCGGGATCTGATAGCCCATTGAAAAGGTCAAACGGACCCGAGTGCAAACACTGCAAAGATGACCCCAAGAAGAACTGCCGCTGGTGCAACTGCCATGTATGTGGCGTGAAGCAGGACCCGGACAAGCAGCTGCTGTGTGACGAGTGTGACATGGCATTCCACATCTACTGCCTCAACCCCCGACTGACCAGCCTCCCCGATGACGACGACTGGTATTGTCCCGAGTGCCGCAACGATGCTAGTGAGGTGGTGCTAGCAGGAGAGAAACTCAAGGACAGCAAGAAGAAATCCAAGATGGCGTCCGCCAGCTCAACCAGCCAGAGGGACTGGGGAAAGGGCATGGCTTGTGTTGGCCGCAGCAAGCAGTGCACCATTGTCCCTTCCAACCACTACGGCCCTGTCCCTGGCGTCCCGGTCGGAAGTATTTGGAAGTTCAGGGTCCAGGTGAGTGAGTCTGGTTGCCACAGGCCACATGTTGCTGGGATCCACGGGAGGAGCAACGATGGAGCTTACTCCTTAGTGCTGGCTGGGGGCTATGAAGACGACCAGGATGACGGCAACGAGTTCACCTACACCGGCTCTGGAGGGCGAGATCTGTCTGGCAACAAGAGGACAGCCGAACAGTCGTGTGATCAGAAGCTCACCAATATGAACAGGGCTCTGGCTCTGAACTGCAACGCATCGGTGAACGAGAAGGATGGGGCCACGGCAAAAGACTGGAAGGCAGGCAAGCCGGTCAGGGTGGTGCGCAGCTCCAAGGGCCGCAAACACAGCAAGTTCAGCCCGGAAGATGGCAACAGATACGACGGAATCTACAAGGTGGTGAAATACTGGCCAGAGAAGGGCAAGTCTGGCTTCCTCGTCTGGAGGTATCTGCTTAAACGAAATGACGACGAGTCAGCGCCATGGACCCGGGACGGCAAGGAACGCATCAAGAAACTGGGACTCACCATGCAGTATCCAGAAGGCTATCTGGAAGCCCAGGCTGCCAAGGAGAAGGAGAACAAGGAGAAGGAGAACGAGGAGGTAACTGAAACACCCACCAAAGGGAAGCGGAAAAGAAAGTCTCAGTCTAATGAAGCTGAAGAGAAGTCATCGCCAGCTAAGGGCACTCCCAAGAAGATGAAGTTGGAGGCTTACAAACTGACCAAAGAACAGAAGGACTGGATCAAGGACGACGAGCCCAACAGGAAGGTGTGGGACGAAGCCATGGAGTCTCTGGCCCTTGGCCCGAAATTCCTGAGCAAAGTCGAGGAGGTTTTCTTGTGTATATGCTGCCAAGAAGTGGTATTTCAACCTATCACCACTGAGTGCCAACACAATGTCTGCAGGgAATGCCTTCACCGGTCTTTCAAGGCAGAGGTGTACTCTTGCCCAGCATGCAGGCACGATCTGGGCAAAAACAACCCAATGAGTGTCAACAAACCCCTCCAAGCCATTCTCAACCAGTTCTTCCCAGGATACAGCAGTGGACGGTGATAACTCGTTCCAGCTGCTTGACCAGCATGTTGACTACATGAACTATGAGGGCAGTTAAGCAGtacaggcaacaacaaaaaacttttcTTAATATAATTAGCAAATGTAAAACGCTGTCTGTTTGGTCGCTGAAATACCACCCCATCTTCTCCAGTCCTATTTGTAACGAACTGTAGCTATGAAACTGCCTTGATCAAATGTATCTAACGTTCTTCTGTAACAATGCATTTTAACTTGACTTGccaaaatcaatacacaagtttAATTCCTTCAAGCACATGCAGTTTTAAGATGTATACGATATGGATACTTTGCAGAACACTTTGTAATAGATTTTAATCAATTGCATACATTTGTATTTAGAAAACACTCCCTTTATAGAATGTATGTTTTATATTCTAAGTTGTATGTCCAATAGTACTGTTCCTAGCTCATGTATTTCATAAGCTAAGCACAACTGATAAATCCGTTGCAACCCTGTTTTGAGAAAATGTCCTCCATATCCCGGGCTTAAGTGAATGTCCTGATCTTAGATTGTGCCTGCCATCGCTCAATGGCAGGTTTTACATGTAGCATCGCGTGTTGCTGCGTCCTTAACAACTTGTGCTTGAGTACATGACTGTGGGCTATAATAGAAGGAATGATGGGTTTGGATTTGATATTGAACCCTAAAGTTATTCTATTTTCTATAGAAATGATTTAGTTGTGGTGGATGTGTTGAATTAATTAACATTCCAGCAATGTCTGTTTactctttcaaaaactgtcattTATTTTGCCATGTGTTATCTGATGGAGTTGCTGAACATTTGATTTAAATTTGAGCAGAGCAAAAATACTCCACAGAAACGTATACCTTTCACTAATCTatgaaatggcagatttttctaTTTTGTAGTAATTATTTCCTAGttgtaaaatgtatttcaccttaaccctttaactgcGGTCTAAGCACACGTTTTCCATCTGAACAAACCCAAAGATGTAAAACCTGTAACCATTGTAGGGTTGAGCACAATTCACCGTTTAGGTGTGCCACAACCTTTTGATTCATGGCAGGGCTGTGGAAAACATCTAGCTCTGTTGAACTTGACCATAGTGGTTCAACAGAAAAATATTTAAGATCCAGAAATTTAATTTAGCTCAATTTCATATTTCTGCTTGTGTTTTATTGCAAAATGAATGCCAGTAGCTGCAGATGTTAGTAATATCCCAAATATTTACAACATTTGCATAGACTGGAAATGTATATTTTCAAATTGTATATGTTTTAGTTGTTTGTAGTTTTAGAAGTAACTTGCTTGCACATGGTTTCCCAAGTGCAGAATTTTCCAATACATCTTCAACCTTTTTATCAAATAAAAATTGCAAAATTGAAATGTTACTGAGATATAAAGAATATAAATGGTGCCTTTTGTTAAATATTATGATTACTGTTGggttttgtgttgtttttttacaatAAATGCATAGAGAACTAA
>XM_021603312.2
agctaacgttaactttgCTAACATTTGGTAGGGTGAATTCGAAATATTCTAGTTAAAGTTTGTCGAGGGAAATGAACGTTAACGTTACATGCTTCACATTACTCACTAGGGCAGCTGCAATGTGGATTCAAGTGCGCACCATGGATGGCAAGGAGACTCATCGGATTGACTCACTGTCCAAGCTCACCAAGGTGGATGAGCTGCGCCTCAAGATCTCGGAGCTCTTCAAGGTTGAGCCAGAAAGACAGAGGCTCTTTTACCGGGGCAAGCAGATGGAGGATAGCCACACCATCTTTGATTACAACGTGGGGCTGAATGATATAGTGCAGCTCCTTGTTAGACAGGCTACGCCCCCTGCCGCTGTCCTCAAGAGCAAGGACAAAGAAGCCGAgctctctgactctgactctggctgTGGCTCGGCACAGAGCGAGTCGGACAAGAGCTCGACCCACTCTGAGGCAGAGGTGCAAGCAGCCGGAACCTCTGCCCAAACAGACACACCAGACCTGGTTGACCCGGGATTTGGCTTTTACAAGatgaATGAGTTTGTTGACGCCAGAGACTTGAACATGGGCGCCTGGTTTGAGGCCCAGATTGTGAACATTACAAAGACCACAAAGACACCTGGAGAGGAAGAGGGCTCTGACTCTAAACCTGGCGAAGAGGAAGTTATTCACTACCATGTCAAATATGAAGActacccAGAGAACGGAGTGGTGCCTCTGCAGTCCAAGGATGTACGCCCACGCGCCCGCACAGTCTACCAGTGGCACCAGCTGGAGGCGGGCATGGTGGTCATGGTAAACTTCAACCCAGACGAACCCAAAGAGCGCGGCTACTGGTACGACGCCCAGATCCAGAAGAAGAGGGAGACACGCACTGTGCACGAGATCTACGCCAAAATACTGCTGGGGGTTGCCGGTGACTCCCTAAACGACTGTCGCATCATGTTCTTGACTGAGATCTACAAAATCGAGGAGCCTGGAGCCTTGGATGGATCCGGAGCGGGATCTGATAGCCCATTGAAAAGGTCAAACGGACCCGAGTGCAAACACTGCAAAGATGACCCCAAGAAGAACTGCCGCTGGTGCAACTGCCATGTATGTGGCGTGAAGCAGGACCCGGACAAGCAGCTGCTGTGTGACGAGTGTGACATGGCATTCCACATCTACTGCCTCAACCCCCGACTGACCAGCCTCCCCGATGACGACGACTGGTATTGTCCCGAGTGCCGCAACGATGCTAGTGAGGTGGTGCTAGCAGGAGAGAAACTCAAGGACAGCAAGAAGAAATCCAAGATGGCGTCCGCCAGCTCAACCAGCCAGAGGGACTGGGGAAAGGGCATGGCTTGTGTTGGCCGCAGCAAGCAGTGCACCATTGTCCCTTCCAACCACTACGGCCCTGTCCCTGGCGTCCCGGTCGGAAGTATTTGGAAGTTCAGGGTCCAGGTGAGTGAGTCTGGTTGCCACAGGCCACATGTTGCTGGGATCCACGGGAGGAGCAACGATGGAGCTTACTCCTTAGTGCTGGCTGGGGGCTATGAAGACGACCAGGATGACGGCAACGAGTTCACCTACACCGGCTCTGGAGGGCGAGATCTGTCTGGCAACAAGAGGACAGCCGAACAGTCGTGTGATCAGAAGCTCACCAATATGAACAGGGCTCTGGCTCTGAACTGCAACGCATCGGTGAACGAGAAGGATGGGGCCACGGCAAAAGACTGGAAGGCAGGCAAGCCGGTCAGGGTGGTGCGCAGCTCCAAGGGCCGCAAACACAGCAAGTTCAGCCCGGAAGATGGCAACAGATACGACGGAATCTACAAGGTGGTGAAATACTGGCCAGAGAAGGGCAAGTCTGGCTTCCTCGTCTGGAGGTATCTGCTTAAACGAAATGACGACGAGTCAGCGCCATGGACCCGGGACGGCAAGGAACGCATCAAGAAACTGGGACTCACCATGCAGTATCCAGAAGGCTATCTGGAAGCCCAGGCTGCCAAGGAGAAGGAGAACAAGGAGAAGGAGAACGAGGAGGTAACTGAAACACCCACCAAAGGGAAGCGGAAAAGAAAGTCTCAGTCTAATGAAGCTGAAGAGAAGTCATCGCCAGCTAAGGGCACTCCCAAGAAGATGAAGTTGGAGGCTTACAAACTGACCAAAGAACAGAAGGACTGGATCAAGGACGACGAGCCCAACAGGAAGGTGTGGGACGAAGCCATGGAGTCTCTGGCCCTTGGCCCGAAATTCCTGAGCAAAGTCGAGGAGGTTTTCTTGTGTATATGCTGCCAAGAAGTGGTATTTCAACCTATCACCACTGAGTGCCAACACAATGTCTGCAGGgAATGCCTTCACCGGTCTTTCAAGGCAGAGGTGTACTCTTGCCCAGCATGCAGGCACGATCTGGGCAAAAACAACCCAATGAGTGTCAACAAACCCCTCCAAGCCATTCTCAACCAGTTCTTCCCAGGATACAGCAGTGGACGGTGATAACTCGTTCCAGCTGCTTGACCAGCATGTTGACTACATGAACTATGAGGGCAGTTAAGCAGtacaggcaacaacaaaaaacttttcTTAATATAATTAGCAAATGTAAAACGCTGTCTGTTTGGTCGCTGAAATACCACCCCATCTTCTCCAGTCCTATTTGTAACGAACTGTAGCTATGAAACTGCCTTGATCAAATGTATCTAACGTTCTTCTGTAACAATGCATTTTAACTTGACTTGccaaaatcaatacacaagtttAATTCCTTCAAGCACATGCAGTTTTAAGATGTATACGATATGGATACTTTGCAGAACACTTTGTAATAGATTTTAATCAATTGCATACATTTGTATTTAGAAAACACTCCCTTTATAGAATGTATGTTTTATATTCTAAGTTGTATGTCCAATAGTACTGTTCCTAGCTCATGTATTTCATAAGCTAAGCACAACTGATAAATCCGTTGCAACCCTGTTTTGAGAAAATGTCCTCCATATCCCGGGCTTAAGTGAATGTCCTGATCTTAGATTGTGCCTGCCATCGCTCAATGGCAGGTTTTACATGTAGCATCGCGTGTTGCTGCGTCCTTAACAACTTGTGCTTGAGTACATGACTGTGGGCTATAATAGAAGGAATGATGGGTTTGGATTTGATATTGAACCCTAAAGTTATTCTATTTTCTATAGAAATGATTTAGTTGTGGTGGATGTGTTGAATTAATTAACATTCCAGCAATGTCTGTTTactctttcaaaaactgtcattTATTTTGCCATGTGTTATCTGATGGAGTTGCTGAACATTTGATTTAAATTTGAGCAGAGCAAAAATACTCCACAGAAACGTATACCTTTCACTAATCTatgaaatggcagatttttctaTTTTGTAGTAATTATTTCCTAGttgtaaaatgtatttcaccttaaccctttaactgcGGTCTAAGCACACGTTTTCCATCTGAACAAACCCAAAGATGTAAAACCTGTAACCATTGTAGGGTTGAGCACAATTCACCGTTTAGGTGTGCCACAACCTTTTGATTCATGGCAGGGCTGTGGAAAACATCTAGCTCTGTTGAACTTGACCATAGTGGTTCAACAGAAAAATATTTAAGATCCAGAAATTTAATTTAGCTCAATTTCATATTTCTGCTTGTGTTTTATTGCAAAATGAATGCCAGTAGCTGCAGATGTTAGTAATATCCCAAATATTTACAACATTTGCATAGACTGGAAATGTATATTTTCAAATTGTATATGTTTTAGTTGTTTGTAGTTTTAGAAGTAACTTGCTTGCACATGGTTTCCCAAGTGCAGAATTTTCCAATACATCTTCAACCTTTTTATCAAATAAAAATTGCAAAATTGAAATGTTACTGAGATATAAAGAATATAAATGGTGCCTTTTGTTAAATATTATGATTACTGTTGggttttgtgttgtttttttacaatAAATGCATAGAGAACTAA
>XM_021603313.2
aaagttgtttttttttggcAGGCGGGGAATCACTGTTGAAGATTCTCATTGATTCAGTCCCCTGAAAGCAGTCTATACAGAGGAGTTGTGTACGGATTAAGCTTGACGGTTTACTAAACGTAATTTAATTATCTACATTTGGAAGAAAAAACTGGGCAGCTGCAATGTGGATTCAAGTGCGCACCATGGATGGCAAGGAGACTCATCGGATTGACTCACTGTCCAAGCTCACCAAGGTGGATGAGCTGCGCCTCAAGATCTCGGAGCTCTTCAAGGTTGAGCCAGAAAGACAGAGGCTCTTTTACCGGGGCAAGCAGATGGAGGATAGCCACACCATCTTTGATTACAACGTGGGGCTGAATGATATAGTGCAGCTCCTTGTTAGACAGGCTACGCCCCCTGCCGCTGTCCTCAAGAGCAAGGACAAAGAAGCCGAgctctctgactctgactctggctgTGGCTCGGCACAGAGCGAGTCGGACAAGAGCTCGACCCACTCTGAGGCAGAGGTGCAAGCAGCCGGAACCTCTGCCCAAACAGACACACCAGACCTGGTTGACCCGGGATTTGGCTTTTACAAGatgaATGAGTTTGTTGACGCCAGAGACTTGAACATGGGCGCCTGGTTTGAGGCCCAGATTGTGAACATTACAAAGACCACAAAGACACCTGGAGAGGAAGAGGGCTCTGACTCTAAACCTGGCGAAGAGGAAGTTATTCACTACCATGTCAAATATGAAGActacccAGAGAACGGAGTGGTGCCTCTGCAGTCCAAGGATGTACGCCCACGCGCCCGCACAGTCTACCAGTGGCACCAGCTGGAGGCGGGCATGGTGGTCATGGTAAACTTCAACCCAGACGAACCCAAAGAGCGCGGCTACTGGTACGACGCCCAGATCCAGAAGAAGAGGGAGACACGCACTGTGCACGAGATCTACGCCAAAATACTGCTGGGGGTTGCCGGTGACTCCCTAAACGACTGTCGCATCATGTTCTTGACTGAGATCTACAAAATCGAGGAGCCTGGAGCCTTGGATGGATCCGGAGCGGGATCTGATAGCCCATTGAAAAGGTCAAACGGACCCGAGTGCAAACACTGCAAAGATGACCCCAAGAAGAACTGCCGCTGGTGCAACTGCCATGTATGTGGCGTGAAGCAGGACCCGGACAAGCAGCTGCTGTGTGACGAGTGTGACATGGCATTCCACATCTACTGCCTCAACCCCCGACTGACCAGCCTCCCCGATGACGACGACTGGTATTGTCCCGAGTGCCGCAACGATGCTAGTGAGGTGGTGCTAGCAGGAGAGAAACTCAAGGACAGCAAGAAGAAATCCAAGATGGCGTCCGCCAGCTCAACCAGCCAGAGGGACTGGGGAAAGGGCATGGCTTGTGTTGGCCGCAGCAAGCAGTGCACCATTGTCCCTTCCAACCACTACGGCCCTGTCCCTGGCGTCCCGGTCGGAAGTATTTGGAAGTTCAGGGTCCAGGTGAGTGAGTCTGGTTGCCACAGGCCACATGTTGCTGGGATCCACGGGAGGAGCAACGATGGAGCTTACTCCTTAGTGCTGGCTGGGGGCTATGAAGACGACCAGGATGACGGCAACGAGTTCACCTACACCGGCTCTGGAGGGCGAGATCTGTCTGGCAACAAGAGGACAGCCGAACAGTCGTGTGATCAGAAGCTCACCAATATGAACAGGGCTCTGGCTCTGAACTGCAACGCATCGGTGAACGAGAAGGATGGGGCCACGGCAAAAGACTGGAAGGCAGGCAAGCCGGTCAGGGTGGTGCGCAGCTCCAAGGGCCGCAAACACAGCAAGTTCAGCCCGGAAGATGGCAACAGATACGACGGAATCTACAAGGTGGTGAAATACTGGCCAGAGAAGGGCAAGTCTGGCTTCCTCGTCTGGAGGTATCTGCTTAAACGAAATGACGACGAGTCAGCGCCATGGACCCGGGACGGCAAGGAACGCATCAAGAAACTGGGACTCACCATGCAGTATCCAGAAGGCTATCTGGAAGCCCAGGCTGCCAAGGAGAAGGAGAACAAGGAGAAGGAGAACGAGGAGGTAACTGAAACACCCACCAAAGGGAAGCGGAAAAGAAAGTCTCAGTCTAATGAAGCTGAAGAGAAGTCATCGCCAGCTAAGGGCACTCCCAAGAAGATGAAGTTGGAGGCTTACAAACTGACCAAAGAACAGAAGGACTGGATCAAGGACGACGAGCCCAACAGGAAGGTGTGGGACGAAGCCATGGAGTCTCTGGCCCTTGGCCCGAAATTCCTGAGCAAAGTCGAGGAGGTTTTCTTGTGTATATGCTGCCAAGAAGTGGTATTTCAACCTATCACCACTGAGTGCCAACACAATGTCTGCAGGgAATGCCTTCACCGGTCTTTCAAGGCAGAGGTGTACTCTTGCCCAGCATGCAGGCACGATCTGGGCAAAAACAACCCAATGAGTGTCAACAAACCCCTCCAAGCCATTCTCAACCAGTTCTTCCCAGGATACAGCAGTGGACGGTGATAACTCGTTCCAGCTGCTTGACCAGCATGTTGACTACATGAACTATGAGGGCAGTTAAGCAGtacaggcaacaacaaaaaacttttcTTAATATAATTAGCAAATGTAAAACGCTGTCTGTTTGGTCGCTGAAATACCACCCCATCTTCTCCAGTCCTATTTGTAACGAACTGTAGCTATGAAACTGCCTTGATCAAATGTATCTAACGTTCTTCTGTAACAATGCATTTTAACTTGACTTGccaaaatcaatacacaagtttAATTCCTTCAAGCACATGCAGTTTTAAGATGTATACGATATGGATACTTTGCAGAACACTTTGTAATAGATTTTAATCAATTGCATACATTTGTATTTAGAAAACACTCCCTTTATAGAATGTATGTTTTATATTCTAAGTTGTATGTCCAATAGTACTGTTCCTAGCTCATGTATTTCATAAGCTAAGCACAACTGATAAATCCGTTGCAACCCTGTTTTGAGAAAATGTCCTCCATATCCCGGGCTTAAGTGAATGTCCTGATCTTAGATTGTGCCTGCCATCGCTCAATGGCAGGTTTTACATGTAGCATCGCGTGTTGCTGCGTCCTTAACAACTTGTGCTTGAGTACATGACTGTGGGCTATAATAGAAGGAATGATGGGTTTGGATTTGATATTGAACCCTAAAGTTATTCTATTTTCTATAGAAATGATTTAGTTGTGGTGGATGTGTTGAATTAATTAACATTCCAGCAATGTCTGTTTactctttcaaaaactgtcattTATTTTGCCATGTGTTATCTGATGGAGTTGCTGAACATTTGATTTAAATTTGAGCAGAGCAAAAATACTCCACAGAAACGTATACCTTTCACTAATCTatgaaatggcagatttttctaTTTTGTAGTAATTATTTCCTAGttgtaaaatgtatttcaccttaaccctttaactgcGGTCTAAGCACACGTTTTCCATCTGAACAAACCCAAAGATGTAAAACCTGTAACCATTGTAGGGTTGAGCACAATTCACCGTTTAGGTGTGCCACAACCTTTTGATTCATGGCAGGGCTGTGGAAAACATCTAGCTCTGTTGAACTTGACCATAGTGGTTCAACAGAAAAATATTTAAGATCCAGAAATTTAATTTAGCTCAATTTCATATTTCTGCTTGTGTTTTATTGCAAAATGAATGCCAGTAGCTGCAGATGTTAGTAATATCCCAAATATTTACAACATTTGCATAGACTGGAAATGTATATTTTCAAATTGTATATGTTTTAGTTGTTTGTAGTTTTAGAAGTAACTTGCTTGCACATGGTTTCCCAAGTGCAGAATTTTCCAATACATCTTCAACCTTTTTATCAAATAAAAATTGCAAAATTGAAATGTTACTGAGATATAAAGAATATAAATGGTGCCTTTTGTTAAATATTATGATTACTGTTGggttttgtgttgtttttttacaatAAATGCATAGAGAACTAA
>XM_021603314.2
GGCAGTAATGATGTTGTTTCTTGTATTGTTCTATGGTTtgtttattattaaactcaccacttgcttcccgactcccagcgtcTACATTataGGCAGCTGCAATGTGGATTCAAGTGCGCACCATGGATGGCAAGGAGACTCATCGGATTGACTCACTGTCCAAGCTCACCAAGGTGGATGAGCTGCGCCTCAAGATCTCGGAGCTCTTCAAGGTTGAGCCAGAAAGACAGAGGCTCTTTTACCGGGGCAAGCAGATGGAGGATAGCCACACCATCTTTGATTACAACGTGGGGCTGAATGATATAGTGCAGCTCCTTGTTAGACAGGCTACGCCCCCTGCCGCTGTCCTCAAGAGCAAGGACAAAGAAGCCGAgctctctgactctgactctggctgTGGCTCGGCACAGAGCGAGTCGGACAAGAGCTCGACCCACTCTGAGGCAGAGGTGCAAGCAGCCGGAACCTCTGCCCAAACAGACACACCAGACCTGGTTGACCCGGGATTTGGCTTTTACAAGatgaATGAGTTTGTTGACGCCAGAGACTTGAACATGGGCGCCTGGTTTGAGGCCCAGATTGTGAACATTACAAAGACCACAAAGACACCTGGAGAGGAAGAGGGCTCTGACTCTAAACCTGGCGAAGAGGAAGTTATTCACTACCATGTCAAATATGAAGActacccAGAGAACGGAGTGGTGCCTCTGCAGTCCAAGGATGTACGCCCACGCGCCCGCACAGTCTACCAGTGGCACCAGCTGGAGGCGGGCATGGTGGTCATGGTAAACTTCAACCCAGACGAACCCAAAGAGCGCGGCTACTGGTACGACGCCCAGATCCAGAAGAAGAGGGAGACACGCACTGTGCACGAGATCTACGCCAAAATACTGCTGGGGGTTGCCGGTGACTCCCTAAACGACTGTCGCATCATGTTCTTGACTGAGATCTACAAAATCGAGGAGCCTGGAGCCTTGGATGGATCCGGAGCGGGATCTGATAGCCCATTGAAAAGGTCAAACGGACCCGAGTGCAAACACTGCAAAGATGACCCCAAGAAGAACTGCCGCTGGTGCAACTGCCATGTATGTGGCGTGAAGCAGGACCCGGACAAGCAGCTGCTGTGTGACGAGTGTGACATGGCATTCCACATCTACTGCCTCAACCCCCGACTGACCAGCCTCCCCGATGACGACGACTGGTATTGTCCCGAGTGCCGCAACGATGCTAGTGAGGTGGTGCTAGCAGGAGAGAAACTCAAGGACAGCAAGAAGAAATCCAAGATGGCGTCCGCCAGCTCAACCAGCCAGAGGGACTGGGGAAAGGGCATGGCTTGTGTTGGCCGCAGCAAGCAGTGCACCATTGTCCCTTCCAACCACTACGGCCCTGTCCCTGGCGTCCCGGTCGGAAGTATTTGGAAGTTCAGGGTCCAGGTGAGTGAGTCTGGTTGCCACAGGCCACATGTTGCTGGGATCCACGGGAGGAGCAACGATGGAGCTTACTCCTTAGTGCTGGCTGGGGGCTATGAAGACGACCAGGATGACGGCAACGAGTTCACCTACACCGGCTCTGGAGGGCGAGATCTGTCTGGCAACAAGAGGACAGCCGAACAGTCGTGTGATCAGAAGCTCACCAATATGAACAGGGCTCTGGCTCTGAACTGCAACGCATCGGTGAACGAGAAGGATGGGGCCACGGCAAAAGACTGGAAGGCAGGCAAGCCGGTCAGGGTGGTGCGCAGCTCCAAGGGCCGCAAACACAGCAAGTTCAGCCCGGAAGATGGCAACAGATACGACGGAATCTACAAGGTGGTGAAATACTGGCCAGAGAAGGGCAAGTCTGGCTTCCTCGTCTGGAGGTATCTGCTTAAACGAAATGACGACGAGTCAGCGCCATGGACCCGGGACGGCAAGGAACGCATCAAGAAACTGGGACTCACCATGCAGTATCCAGAAGGCTATCTGGAAGCCCAGGCTGCCAAGGAGAAGGAGAACAAGGAGAAGGAGAACGAGGAGGTAACTGAAACACCCACCAAAGGGAAGCGGAAAAGAAAGTCTCAGTCTAATGAAGCTGAAGAGAAGTCATCGCCAGCTAAGGGCACTCCCAAGAAGATGAAGTTGGAGGCTTACAAACTGACCAAAGAACAGAAGGACTGGATCAAGGACGACGAGCCCAACAGGAAGGTGTGGGACGAAGCCATGGAGTCTCTGGCCCTTGGCCCGAAATTCCTGAGCAAAGTCGAGGAGGTTTTCTTGTGTATATGCTGCCAAGAAGTGGTATTTCAACCTATCACCACTGAGTGCCAACACAATGTCTGCAGGgAATGCCTTCACCGGTCTTTCAAGGCAGAGGTGTACTCTTGCCCAGCATGCAGGCACGATCTGGGCAAAAACAACCCAATGAGTGTCAACAAACCCCTCCAAGCCATTCTCAACCAGTTCTTCCCAGGATACAGCAGTGGACGGTGATAACTCGTTCCAGCTGCTTGACCAGCATGTTGACTACATGAACTATGAGGGCAGTTAAGCAGtacaggcaacaacaaaaaacttttcTTAATATAATTAGCAAATGTAAAACGCTGTCTGTTTGGTCGCTGAAATACCACCCCATCTTCTCCAGTCCTATTTGTAACGAACTGTAGCTATGAAACTGCCTTGATCAAATGTATCTAACGTTCTTCTGTAACAATGCATTTTAACTTGACTTGccaaaatcaatacacaagtttAATTCCTTCAAGCACATGCAGTTTTAAGATGTATACGATATGGATACTTTGCAGAACACTTTGTAATAGATTTTAATCAATTGCATACATTTGTATTTAGAAAACACTCCCTTTATAGAATGTATGTTTTATATTCTAAGTTGTATGTCCAATAGTACTGTTCCTAGCTCATGTATTTCATAAGCTAAGCACAACTGATAAATCCGTTGCAACCCTGTTTTGAGAAAATGTCCTCCATATCCCGGGCTTAAGTGAATGTCCTGATCTTAGATTGTGCCTGCCATCGCTCAATGGCAGGTTTTACATGTAGCATCGCGTGTTGCTGCGTCCTTAACAACTTGTGCTTGAGTACATGACTGTGGGCTATAATAGAAGGAATGATGGGTTTGGATTTGATATTGAACCCTAAAGTTATTCTATTTTCTATAGAAATGATTTAGTTGTGGTGGATGTGTTGAATTAATTAACATTCCAGCAATGTCTGTTTactctttcaaaaactgtcattTATTTTGCCATGTGTTATCTGATGGAGTTGCTGAACATTTGATTTAAATTTGAGCAGAGCAAAAATACTCCACAGAAACGTATACCTTTCACTAATCTatgaaatggcagatttttctaTTTTGTAGTAATTATTTCCTAGttgtaaaatgtatttcaccttaaccctttaactgcGGTCTAAGCACACGTTTTCCATCTGAACAAACCCAAAGATGTAAAACCTGTAACCATTGTAGGGTTGAGCACAATTCACCGTTTAGGTGTGCCACAACCTTTTGATTCATGGCAGGGCTGTGGAAAACATCTAGCTCTGTTGAACTTGACCATAGTGGTTCAACAGAAAAATATTTAAGATCCAGAAATTTAATTTAGCTCAATTTCATATTTCTGCTTGTGTTTTATTGCAAAATGAATGCCAGTAGCTGCAGATGTTAGTAATATCCCAAATATTTACAACATTTGCATAGACTGGAAATGTATATTTTCAAATTGTATATGTTTTAGTTGTTTGTAGTTTTAGAAGTAACTTGCTTGCACATGGTTTCCCAAGTGCAGAATTTTCCAATACATCTTCAACCTTTTTATCAAATAAAAATTGCAAAATTGAAATGTTACTGAGATATAAAGAATATAAATGGTGCCTTTTGTTAAATATTATGATTACTGTTGggttttgtgttgtttttttacaatAAATGCATAGAGAACTAA

Function

NR:

description
E3 ubiquitin-protein ligase UHRF1 isoform X1

GO:

id name namespace
GO:0000122 negative regulation of transcription by RNA polymerase II biological_process
GO:0002088 lens development in camera-type eye biological_process
GO:0007049 cell cycle biological_process
GO:0010216 maintenance of DNA methylation biological_process
GO:0016574 histone ubiquitination biological_process
GO:0031100 animal organ regeneration biological_process
GO:0051865 protein autoubiquitination biological_process
GO:0000791 euchromatin cellular_component
GO:0000792 heterochromatin cellular_component
GO:0005657 replication fork cellular_component
GO:0005737 cytoplasm cellular_component
GO:0044729 hemi-methylated DNA-binding molecular_function
GO:0004842 ubiquitin-protein transferase activity molecular_function
GO:0035064 methylated histone binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K10638 UHRF1, NP95; E3 ubiquitin-protein ligase UHRF1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036977816.1 False 3881 mRNA 0.47 17 53334333 53351817
XM_036977814.1 False 3932 mRNA 0.47 17 53334333 53357072
XM_021603312.2 False 3970 mRNA 0.46 17 53334333 53357901
XM_021603313.2 False 4015 mRNA 0.46 17 53334333 53358132
XM_021603314.2 True 3952 mRNA 0.47 17 53334333 53376599

Neighbor

gene id symbol gene type direction distance location
kdm4b LOC101448002 coding downstream 398 53246145 ~ 53333935 (-)
ptprsa LOC106613507 coding downstream 646287 52404727 ~ 52688046 (-)
LOC110524020 LOC106613504 coding downstream 960932 52351810 ~ 52373401 (-)
LOC110524019 LOC106613502 coding downstream 1047623 52264521 ~ 52286710 (-)
LOC110524016 LOC100380721 coding downstream 1134485 52172054 ~ 52199848 (-)
LOC110522968 LOC106613459 coding upstream 346791 53723390 ~ 53734904 (-)
LOC118964619 LOC106613459 coding upstream 364045 53740644 ~ 53745563 (-)
LOC110524031 LOC106613515 coding upstream 370259 53746858 ~ 53750268 (-)
ccdc181 ccdc181 coding upstream 546208 53922807 ~ 53928736 (-)
prrg1 LOC106613522 coding upstream 564344 53940943 ~ 53945602 (-)
G414810 LOC103376403 non-coding downstream 115957 53217658 ~ 53218376 (-)
G414558 NA non-coding downstream 170999 53162927 ~ 53163334 (-)
G414542 NA non-coding downstream 180699 53153330 ~ 53153634 (-)
G414487 NA non-coding downstream 223229 53110875 ~ 53111104 (-)
G414477 NA non-coding downstream 234701 53099280 ~ 53099632 (-)
G414917 LOC106613511 non-coding upstream 47472 53424071 ~ 53481508 (-)
G414922 NA non-coding upstream 48097 53424696 ~ 53425162 (-)
G414937 NA non-coding upstream 83885 53460484 ~ 53462223 (-)
G414973 NA non-coding upstream 164498 53541097 ~ 53541311 (-)
G414978 NA non-coding upstream 168408 53545007 ~ 53545240 (-)
G412613 NA other downstream 1721771 51558378 ~ 51612562 (-)
G412372 NA other downstream 1957203 51373465 ~ 51377130 (-)
LOC110524003 LOC106613485 other downstream 2149558 51179758 ~ 51228505 (-)
G411930 NA other downstream 2610256 50723159 ~ 50724077 (-)
G411929 NA other downstream 2611272 50722314 ~ 50723061 (-)
G415256 LOC106613513 other upstream 241084 53617683 ~ 53618864 (-)
G415420 NA other upstream 514161 53890760 ~ 53892906 (-)
G415464 nexn other upstream 627132 54002448 ~ 54005673 (-)
G416110 NA other upstream 986687 54363286 ~ 54392411 (-)
LOC110524071 LOC106613554 other upstream 1764716 55123617 ~ 55181458 (-)

Expression


Co-expression Network