Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964771 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 53345080 ~ 53345217 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051964.1 | True | 138 | mRNA | 0.51 | 1 | 53345080 | 53345217 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kdm4b | LOC101448002 | coding | downstream | 11145 | 53246145 ~ 53333935 (-) |
| ptprsa | LOC106613507 | coding | downstream | 657034 | 52404727 ~ 52688046 (-) |
| LOC110524020 | LOC106613504 | coding | downstream | 971679 | 52351810 ~ 52373401 (-) |
| LOC110524019 | LOC106613502 | coding | downstream | 1058370 | 52264521 ~ 52286710 (-) |
| LOC110524016 | LOC100380721 | coding | downstream | 1145232 | 52172054 ~ 52199848 (-) |
| LOC110522968 | LOC106613459 | coding | upstream | 378173 | 53723390 ~ 53734904 (-) |
| LOC118964619 | LOC106613459 | coding | upstream | 395427 | 53740644 ~ 53745563 (-) |
| LOC110524031 | LOC106613515 | coding | upstream | 401641 | 53746858 ~ 53750268 (-) |
| ccdc181 | ccdc181 | coding | upstream | 577590 | 53922807 ~ 53928736 (-) |
| prrg1 | LOC106613522 | coding | upstream | 595726 | 53940943 ~ 53945602 (-) |
| G414810 | LOC103376403 | non-coding | downstream | 126704 | 53217658 ~ 53218376 (-) |
| G414558 | NA | non-coding | downstream | 181746 | 53162927 ~ 53163334 (-) |
| G414542 | NA | non-coding | downstream | 191446 | 53153330 ~ 53153634 (-) |
| G414487 | NA | non-coding | downstream | 233976 | 53110875 ~ 53111104 (-) |
| G414477 | NA | non-coding | downstream | 245448 | 53099280 ~ 53099632 (-) |
| G414877 | NA | non-coding | upstream | 16095 | 53361312 ~ 53361578 (-) |
| G414917 | LOC106613511 | non-coding | upstream | 78854 | 53424071 ~ 53481508 (-) |
| G414922 | NA | non-coding | upstream | 79479 | 53424696 ~ 53425162 (-) |
| G414937 | NA | non-coding | upstream | 115267 | 53460484 ~ 53462223 (-) |
| G414973 | NA | non-coding | upstream | 195880 | 53541097 ~ 53541311 (-) |
| G412613 | NA | other | downstream | 1732518 | 51558378 ~ 51612562 (-) |
| G412372 | NA | other | downstream | 1967950 | 51373465 ~ 51377130 (-) |
| LOC110524003 | LOC106613485 | other | downstream | 2160305 | 51179758 ~ 51228505 (-) |
| G411930 | NA | other | downstream | 2621003 | 50723159 ~ 50724077 (-) |
| G411929 | NA | other | downstream | 2622019 | 50722314 ~ 50723061 (-) |
| G415256 | LOC106613513 | other | upstream | 272466 | 53617683 ~ 53618864 (-) |
| G415420 | NA | other | upstream | 545543 | 53890760 ~ 53892906 (-) |
| G415464 | nexn | other | upstream | 658514 | 54002448 ~ 54005673 (-) |
| G416110 | NA | other | upstream | 1018069 | 54363286 ~ 54392411 (-) |
| LOC110524071 | LOC106613554 | other | upstream | 1796098 | 55123617 ~ 55181458 (-) |
