Item | Value |
---|---|
gene id | LOC110524032 |
gene name | LOC106613514 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 53766770 ~ 53801558 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
zinc finger CCCH domain-containing protein 13-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036977828.1 | False | 4776 | mRNA | 0.51 | 12 | 53766770 | 53801558 |
XM_036977829.1 | False | 4795 | mRNA | 0.51 | 12 | 53766773 | 53801558 |
XM_036977831.1 | False | 4439 | mRNA | 0.50 | 10 | 53785590 | 53801558 |
XM_036977832.1 | True | 4496 | mRNA | 0.51 | 10 | 53786434 | 53801558 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110524030 | LOC106613513 | coding | upstream | 148205 | 53616527 ~ 53618565 (+) |
opa1 | LOC106613511 | coding | upstream | 304514 | 53403769 ~ 53462256 (+) |
LOC118964714 | NA | coding | upstream | 870653 | 52875720 ~ 52896117 (+) |
LOC110524018 | LOC105026225 | coding | upstream | 1503714 | 52254713 ~ 52263056 (+) |
LOC118964618 | NA | coding | upstream | 1517875 | 52246773 ~ 52248895 (+) |
LOC110524034 | LOC106613518 | coding | downstream | 26397 | 53827955 ~ 53923888 (+) |
LOC110524036 | LOC106573996 | coding | downstream | 127708 | 53929266 ~ 53940832 (+) |
LOC110524040 | LOC106613524 | coding | downstream | 149272 | 53950830 ~ 53961823 (+) |
LOC110524039 | LOC106613527 | coding | downstream | 172033 | 53973591 ~ 53976232 (+) |
LOC110524041 | LOC106613525 | coding | downstream | 189698 | 53991256 ~ 54005206 (+) |
G415117 | NA | non-coding | upstream | 39160 | 53727409 ~ 53727610 (+) |
G415112 | NA | non-coding | upstream | 48607 | 53717793 ~ 53718163 (+) |
G415035 | NA | non-coding | upstream | 54049 | 53712500 ~ 53712721 (+) |
G415106 | NA | non-coding | upstream | 57162 | 53708969 ~ 53709608 (+) |
G415086 | NA | non-coding | upstream | 93360 | 53673174 ~ 53673410 (+) |
G415182 | NA | non-coding | downstream | 15295 | 53816853 ~ 53817092 (+) |
G415189 | NA | non-coding | downstream | 25421 | 53826979 ~ 53827219 (+) |
G415144 | NA | non-coding | downstream | 147077 | 53948635 ~ 53949648 (+) |
G415467 | NA | non-coding | downstream | 206329 | 54007887 ~ 54008098 (+) |
G415474 | NA | non-coding | downstream | 209033 | 54010591 ~ 54010880 (+) |
G414488 | LOC106562530 | other | upstream | 654263 | 53112183 ~ 53112507 (+) |
G414041 | NA | other | upstream | 987291 | 52778517 ~ 52779479 (+) |
G414007 | NA | other | upstream | 1005041 | 52761389 ~ 52761729 (+) |
G412859 | NA | other | upstream | 1963950 | 51802250 ~ 51802820 (+) |
camsap2a | camsap2 | other | upstream | 2628386 | 51059834 ~ 51153381 (+) |
G415582 | LOC106584099 | other | downstream | 376371 | 54177929 ~ 54183430 (+) |
G415808 | NA | other | downstream | 527637 | 54329195 ~ 54329780 (+) |
G415809 | NA | other | downstream | 528522 | 54330080 ~ 54330480 (+) |
mutyh | mutyh | other | downstream | 544978 | 54346481 ~ 54395448 (+) |
G415946 | NA | other | downstream | 788516 | 54590074 ~ 54613142 (+) |