LOC110524055


Basic Information

Item Value
gene id LOC110524055
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 54595497 ~ 54613143 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036977852.1
aataccacaatgagatcctgaggcccattgtgaggcccattttcttaaaaaaaaatctgtaaccaacaaatgcatatctgtattcgcagtcatgtgaaatccatagattagggcctaatgcttTGGTTTCAATTGACTggtttcctcatatgaactgtaactcagtaaaatcgttaattgttgcatgttacatttatatttttgttcagtatagctacTGGACTAACAACAAACAAGAAATGGGAAACTGGTCTCATTCTATTTAACCTGTCAATGTGTGTTTGcttgtcggtgtgtgtgtgtgtgcctctgtgtgttaTGTTTCAGTATGgaggtaggtaggtgtgtgtgcagAGGCCTATCAGGGTGCATTGCGGCACATCAACGTCGCCTTTATGACCTTTTGAGGTGCTGGACAAAGGCAGAAAGCCACGCACGTTGCCCCAGATACGACCCAAACTGGTGGATGGGGAAAGACACTACAAGAAGGCTATCGCTAGGAAGAAAATCCGACTGGacagGAagtacattatatattattatcTCCTGCAATCAAACGGAGGTGCCTCTGTCTGTACCCTGGGACATCAGCAACCAGGTCAGTCTGCACACTCTGGAGAACCAAATGCTTTGTTTTAAGGTAGAGACTCATGTCAACGTCCCCGCTGAACAGGCCTTCCATCTGCTCTCAGACCTGCGCAGGAGACATGAGTGGGACAGGCATTACCCACAATGTGATGTGATCGTCCCGGCAGAGAGAATGACACCATCAACCGTGTGGCCACTCCGTGTGGACCCATACCTGATTGCCCTGCCACTAAGGAATACACCCAGGGAGAAGTTCTCTGTGCAGGCTTCAGTATCTGCGAGGAGTCCGACTCAGAATCTCCTACTACAACCAGGCCACACCGGGAGTCCTCCATTATATCTCCAACGACATCGCAGGCCTTTCTTCCACCTTTCACTCCTGCAGCAAGTACcgagaggagaacagagacagCCTAGCCACCCTGCCCCTTCTGACCTGTGACGAAATGGTATCATCCTGATCCCCTCTGTCCTGTCACACATGGTACAGTCCTGGAAGCGCTGCCCCTTTGACCTATGATAGAATGATACCATTCTCCTGGCCGCCTTGCACCACTCTGCCCTGTGAAAGATGGTATCACCCAGCACCCTTCTGCCTTGTTACTGAATGACACCGTCCTGCTGCCCTGCACCCCTACCAATATGTGCACTTGGAAAGGACCAGGATAGCTAGTTCCCTTTTCACCCATTCTGTACTGAGGAACAGCCTAACTCTTATCATTGGGAGACCTGAGAACGCCAGTTCTGGGATATTCCCCGACCCCAACTGCCAAGGAAATCTGTACTTTTGCATTTCTAAAATGTGGGATTTTCAAATGTGGGACTAGTTTTGTGATTACTAATGTTTGTTACTCTCTTTGATGTTACATCATGATCTTccagaccagagtacatttccACACTACAGGTTACTCTTATCTCTCAAGACTGTCAGCTGGTGAACGTCCATTTGTATAATATTATATCAAACTCATCTTTTGATATTACGTGCAATACTTAAGACCTAACTAAACACAAGTATTGTTATTATCTGGACATTAAACAGTTAGTAGCCCTATGAACAGGAGAAGTATGCAAACTGGTTTGCTATGCAGTTGAGTCTGACATGTTTGTacatgtttttgtcttgtctcttGCTACCGAACTGTGGATAAAAAAGCAGACTAGTTCAAGTAGGAGTATTTACATGCAATTTGTTTTACAATAGGCTATTTTCTACCTCCTTAAATCACATTCTTAATCCACCATTTGCCTTTTGAATCATGTAGTCGAGATATACATCTACTGTATTTGTGATTTTGATTTGGGAGACTAGTGCGCTGTCTAATCTCAGAATGAGCCAAATACACTTTACTTCACAACAGGTATTTCAACATGAGTTGACGCCACGAGGTGAATAAATAGTCATGATTTCACTCGAACAATAAACACAATAGACCAGTGA

Function

NR:

description
acyl-coenzyme A thioesterase 11 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036977852.1 True 2032 mRNA 0.44 7 54595497 54613143

Neighbor

gene id symbol gene type direction distance location
LOC118964620 NA coding upstream 165 54589958 ~ 54595332 (+)
LOC110522872 LOC106613984 coding upstream 41108 54552355 ~ 54554389 (+)
dio1 dio1 coding upstream 45335 54547513 ~ 54550162 (+)
LOC110524051 LOC106613536 coding upstream 216759 54374204 ~ 54378738 (+)
mutyh mutyh coding upstream 231782 54346481 ~ 54395448 (+)
fpgt fpgt coding downstream 4381 54617524 ~ 54620337 (+)
LOC118964715 NA coding downstream 10547 54623690 ~ 54636937 (+)
LOC110524059 LOC106613985 coding downstream 88969 54702112 ~ 54716209 (+)
LOC110524062 LOC106613542 coding downstream 205470 54818613 ~ 54833842 (+)
LOC110524063 LOC106613544 coding downstream 255228 54868248 ~ 54876340 (+)
G415914 NA non-coding upstream 39161 54555076 ~ 54556336 (+)
G415887 NA non-coding upstream 81948 54503035 ~ 54513549 (+)
G415886 NA non-coding upstream 99108 54458230 ~ 54496389 (+)
G415819 NA non-coding upstream 250396 54344875 ~ 54345101 (+)
G416005 NA non-coding downstream 75439 54688582 ~ 54688882 (+)
G416362 NA non-coding downstream 222470 54835613 ~ 54837792 (+)
G416367 NA non-coding downstream 226219 54839362 ~ 54839580 (+)
G416377 NA non-coding downstream 245887 54859030 ~ 54859350 (+)
G416378 NA non-coding downstream 246298 54859441 ~ 54859821 (+)
G415809 NA other upstream 265017 54330080 ~ 54330480 (+)
G415808 NA other upstream 265717 54329195 ~ 54329780 (+)
G415582 LOC106584099 other upstream 412067 54177929 ~ 54183430 (+)
G414488 LOC106562530 other upstream 1482990 53112183 ~ 53112507 (+)
G416857 NA other downstream 711502 55324645 ~ 55325271 (+)
G418077 LOC106613582 other downstream 2004747 56617890 ~ 56628617 (+)
G418119 LOC106613588 other downstream 2113042 56726185 ~ 56729821 (+)
G418251 rtca other downstream 2310781 56923924 ~ 56925176 (+)
LOC100135807 LOC106613594 other downstream 2330695 56943838 ~ 56958165 (+)

Expression


Co-expression Network