fpgt (fpgt)


Basic Information

Item Value
gene id fpgt
gene name fpgt
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 54617524 ~ 54620337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603358.2
ATAATAATCATGTGACTAGACCCGGAAATTAGGCAGGTGACATCACTGCAGCAGTTTCGAGTCAAAACATTTCAATTTCAATCCATTCCATATCCACAAGAACTGAATATGCTACATTTAAAAATTGAATGACGCAAATGTGATGTTAGTTGTTCTGCGGATGCCTGTTTCGTATGCATTAGACCACTTGACTTTGAGCCAGGAGAATGAACGAACAAGGAAGTAAAAAGTTGCAAATTGCAACAATGGAGAAACTTGAGAGATTCGATACATTACGTGGTAAGCAGGTGCAACCTGGAGAGTTTTGGGATCTAGTTGTTTTAACCGCTGTAGATGACAACCAGAGAGAAGCATACGAACTTCAGATCTCAGAGAAACTTGGGAGGAAAGAGATCCCACTTGGCATTTCATATCACGTGTTCTCAGATCCACCTGGAGCCAAAATAGGAAATGGAGGCGCAACACTGTACTCTCTGCAACGGCTGGAAGACATCTATGGGAAGGCTCTGGGTGGATACAGGATCCTTCTGATTCATGCAGGTGGATTCAGTCAGCGTTTGCCCAATGCCAGTGCCCTGGGGAAAATCTTCACCCCCATGCCCTTGGGTGACCCTCTTTACCAGATGCTGGAGCTCAAACTGGCCGTGTTTGTGGATTTACCCAAGCACATGAAACCGGGTGTGCTGGTAACCAGTGCGGATTGCATAGAGCTCTACAGTATAGCGGAGGATGAGAACATCAGGTTTGACAGGTCTGGGTTCACTGCTCTAGcccatccctcccccatctccATTGGAACAACCCACGGAGTCTTTGTGCTGGACCAGAAGGAGAAGTCTGTATTGGCCGACATGGAATACAGGACATGCCTCCATTTTCTGCACAAACCTAGCGTCAAGAAGATGCATGAAAACGGTGCTGTGTGTAAGAGCCAGGATAGCTGTATGTCACTTCTGAGTGATGCAGAGTTTGTGTACACAGACAGTACATATTATGTAGATTACAACACTGCAATGTCATTGCTTAGTCTATTCCGAGAAGTGGGTCCTTTGGGCTGTGAGATAGATGCCTATGGGGACTTCCTTCAGGCCCTGGGTCCCCAAGCCACAGTGGCTTACACCAACAACACTGCCAACGTCACCAAGCAGGAGAGCAACCTGGTGGAGATGCGTCAGAAGATCTTCCACTGCCTTAAGGGAACCCCGCTCAACCTGGTGGCTCTCAACCACTCTAAGTTTTACCACATCGGCACCACCACAGAGTACCTCTTCTACCTCACAGAGGACCCGTGCCTGAGGGGTGAGCTGGGACTATACAAGGTGCTAGGCTACAGCCAACACTTTAGCTTTAAGGTCTGCTGTGTGATGCTCAGTGACGTGAAGCCCGGCTGCTCTTTAACTCCAGGCTCGGTGGTAGAGTACTGCAGGCTGGAGGCCGGCGCTCATGTTGGCGGGCGGACCATACTCAGCGGTTGCTGGGTAGGTGCGGGCCTGAAAGTGCCTGATGGAACCTTCATGCACTCCCTCTGCGTGAACCGGGAGGGCCAAACCGGTTTTGTTACCGTCACCTTCGGCATCGAGGATGACCTCAAGAAGAGCGTGGGGTCCCCTGCGAATATGGAGGGCTTGAACCTGTTCGGGGCCAGTTTGGTCGAGTGCCTGGCTAAGTGGGGCCTGAGTCCCGAGAGCCTGAGGTTCTCTGGTGACACATCGAGTTGTAGTCTTTGGAACGCCTGTCTCTTCCCTGTGTGCCCGGACATGCGCAactccttctccctgactctgGAGATGCTGCAGCCGGGTGGGTCCACTGTCACGTTGCCCCCAGGCACCAAGCTGATGTCTCTACAGGAGGCCCTGCAATGTAAAAACTTGGAGGAGATGCTCAAGTACAGGAAGAAACTAATGGAGGATGTAAAGATGAAGAAATGGAGCTGACTGAGCTATAGTGATTAGGCTACTATTGATTGTAATACCATTGTGCCTTTTGTAATCATGATCGGAAGGATTGTGTGTTAAATTGAACTGAAGTAGGGATACAATGTGGTGGGCATTTGGTAGCATTCGGGTACAATGGTTGGATCAGCTATTTGATACATAAACGGGACATTTGGAGGTAgcttttttttgttatttctgttgtatatataaaaaaaaattatggGGAAACAATTGGGTAATGACAATccattttgtaataatgacagaaAATATTTGAGATTTGTGTTTGTCGCTTCATTGTCCTATGCTGGTGTGGGACACTTTCCTCAGAATTAAAATAGATTCTGGTACTGTG

Function

symbol description
fpgt Predicted to enable nucleotide binding activity and transferase activity, transferring phosphorus-containing groups. Orthologous to human FPGT (fucose-1-phosphate guanylyltransferase).

NR:

description
fucose-1-phosphate guanylyltransferase

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016779 nucleotidyltransferase activity molecular_function

KEGG:

id description
K00976 FPGT; fucose-1-phosphate guanylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603358.2 True 2295 mRNA 0.48 4 54617524 54620337

Neighbor

gene id symbol gene type direction distance location
LOC110524055 NA coding upstream 4381 54595497 ~ 54613143 (+)
LOC118964620 NA coding upstream 22192 54589958 ~ 54595332 (+)
LOC110522872 LOC106613984 coding upstream 63135 54552355 ~ 54554389 (+)
dio1 dio1 coding upstream 67362 54547513 ~ 54550162 (+)
LOC110524051 LOC106613536 coding upstream 238786 54374204 ~ 54378738 (+)
LOC118964715 NA coding downstream 3353 54623690 ~ 54636937 (+)
LOC110524059 LOC106613985 coding downstream 81775 54702112 ~ 54716209 (+)
LOC110524062 LOC106613542 coding downstream 198276 54818613 ~ 54833842 (+)
LOC110524063 LOC106613544 coding downstream 248034 54868248 ~ 54876340 (+)
LOC110522972 LOC106613545 coding downstream 256526 54876863 ~ 54888523 (+)
G415946 NA non-coding upstream 4382 54590074 ~ 54613142 (+)
G415914 NA non-coding upstream 61188 54555076 ~ 54556336 (+)
G415887 NA non-coding upstream 103975 54503035 ~ 54513549 (+)
G415886 NA non-coding upstream 121135 54458230 ~ 54496389 (+)
mutyh mutyh non-coding upstream 222076 54346481 ~ 54395448 (+)
G416005 NA non-coding downstream 68245 54688582 ~ 54688882 (+)
G416362 NA non-coding downstream 215276 54835613 ~ 54837792 (+)
G416367 NA non-coding downstream 219025 54839362 ~ 54839580 (+)
G416377 NA non-coding downstream 238693 54859030 ~ 54859350 (+)
G416378 NA non-coding downstream 239104 54859441 ~ 54859821 (+)
G415809 NA other upstream 287044 54330080 ~ 54330480 (+)
G415808 NA other upstream 287744 54329195 ~ 54329780 (+)
G415582 LOC106584099 other upstream 434094 54177929 ~ 54183430 (+)
G416857 NA other downstream 704308 55324645 ~ 55325271 (+)
G418077 LOC106613582 other downstream 1997553 56617890 ~ 56628617 (+)
G418119 LOC106613588 other downstream 2105848 56726185 ~ 56729821 (+)
G418251 rtca other downstream 2303587 56923924 ~ 56925176 (+)
LOC100135807 LOC106613594 other downstream 2323501 56943838 ~ 56958165 (+)

Expression


Co-expression Network