LOC110524065 (elov7)


Basic Information

Item Value
gene id LOC110524065
gene name elov7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 54899096 ~ 54924752 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603376.2
GGGATTAaaaacagggaggagggagggacaagCATTTCACTTGAAACACGACACACTTAACGGTTCCCTCTTCAAGTTTGTCACGCTCTCCACCACTTGGTTCCAGGACAGGGAGAGCTAGCAAGCTGTCCTCTGCGGTGAACGGGACTTGGCGTCCACACTGGCATCCATTAGCCCGCTCTGAGGAGAACAGGAAGTTTACCACAGCAACGACGAGGTGATTGGGTGATACCACAGGGGGAAGCTAGTCAAAATGCTTCAGGACATTGGTGCTAGAGCCATGGAGGTCTACGAGTTCCTCTTGAAGGGAACAGACCCGCGATTGTGGGGCTACCCACTCATGCAGAGTCCGGTGAGCATGACGGCCATCTTGCTGACCTACATCTTCTTCGTGCTGGTCGCTGGGCCTCGCTTCATGGCCAACCGCAAGCCCTTCCAGCTCAAGGAGGCCATGATCGCCTACAACTTTACCATGGTGGCGATGTCAACCTTTATTGTCTATGAGTTCTTGAtgtctggctgggccacaacaTACACATGGAGATGTGACGCAATTGATTACTCAGACAGCCCCCAAGGCCTTAGAATGGTTCGAGTGGCCTGGTTATTCTTGTTCTCCAAATTCATTGAGCTCTTGGACACGGTGTTCTTTGTTCTGAGGAAGAAACATGGCCAGATCACCTTCCTGCATGTCTTCCACCACTCCTTCATGCCCTGGACCTGGTGGTGGGGCGTCAGCTTCGCTCCCGGGGGAATGGGCTCTTTCCATGCCATGGTGAATTCCATCGTCCACATCATCATGTATTCTTACTACGGCCTGTCTGCGGCTGGACCACAATTCCAAAAGTTCCTCTGGTGGAAGAAGTACATGACCGCCATCCAGCTGGTTCAGTTTGTGATGGTGTCCCTTCACGCCACCCAGTATTACTTCATGAATAGCTGTGACTACCAGGTCCCCCTGTTCATCCACCTCATCTGGATGTATGGCACCTTCTTCTTTGTGCTCTTCTCCAACTTCTGGTACCAGGCTTACGTAAAGGGCAAGAGGTTGCCCAAGCAGGATACCAAGCCCAGCCTCAATGGCAAGGCCAACGGGACCACCTTGGTCGCCAATGGCAAATACCATGAGAACAGTACCAGCAATGGCACCAGCAACAGTTCCAGTCACCACAAAAATGGCAGTGCCCATGCGGACAAGATGAAGAAGTCCTAAGATCTTCAGAAAAGAACACCCAAGACGCATGAATATGAGATCCCCGCACAAACTACCATGGATTCCAAAGAATGTTTTGGTTATGTTTATTTTCTGATCGTTAAGTTTTATTCCGCACAACAACCTGGGGAAATGACGTGGTCAATGATTTCCTCAGTTGGGGTCCCACATTAACAGTTTTTAAATTTAAACTGGGAAACTAACTATGGAACACAATGTATGAAGAGAAGACATGTTATTATGGCCTAATTTTATCTTCACTGATGTTGCCAATGAAGACAGTTCCCATGAAAGGTTacacactgtatgtacatgtgcACACAAACACTCCTACACCCACCACTCACCTGTCGCCACCCGATCATGTCCCTCTGACCCCCTGTGGACAGATGACACTGTACAGTTTCTATCATCAAACTTGAACACACCTTTGTAAATAGTTTTACTGTCAAAAACAACTAATGAAAATGGTATGCTTTAGAATTTTGTTACTTTATCTATGTTAAATGAAATACCAATAAATTACATTTTAAGTAACTGGTA
>XM_036977860.1
AGGGATTAaaaacagggaggagggagggacaagCATTTCACTTGAAACACGACACACTTAACGGTTCCCTCTTCAAGTTTGTCACGCTCTCCACCACTTGGTTCCAGGACAGGGAGAGCTAGCAAGCTGTCCTCTGCGGTGAACGGGACTTGGCGTCCACACTGGCATCCATTAGCCCGCTCTGAGGAGAACAGGAAGTTTACCACAGCAACGACGAGAACAAGACAGACGGCAGATGAGTTCAAGGCACTGTGACGTGTGCCGGCACCACAGATATTTTGCTCATGCCGACTCACCGCGTTCTCCACAGCTTTTCATGTGATTGGGTGATACCACAGGGGGAAGCTAGTCAAAATGCTTCAGGACATTGGTGCTAGAGCCATGGAGGTCTACGAGTTCCTCTTGAAGGGAACAGACCCGCGATTGTGGGGCTACCCACTCATGCAGAGTCCGGTGAGCATGACGGCCATCTTGCTGACCTACATCTTCTTCGTGCTGGTCGCTGGGCCTCGCTTCATGGCCAACCGCAAGCCCTTCCAGCTCAAGGAGGCCATGATCGCCTACAACTTTACCATGGTGGCGATGTCAACCTTTATTGTCTATGAGTTCTTGAtgtctggctgggccacaacaTACACATGGAGATGTGACGCAATTGATTACTCAGACAGCCCCCAAGGCCTTAGAATGGTTCGAGTGGCCTGGTTATTCTTGTTCTCCAAATTCATTGAGCTCTTGGACACGGTGTTCTTTGTTCTGAGGAAGAAACATGGCCAGATCACCTTCCTGCATGTCTTCCACCACTCCTTCATGCCCTGGACCTGGTGGTGGGGCGTCAGCTTCGCTCCCGGGGGAATGGGCTCTTTCCATGCCATGGTGAATTCCATCGTCCACATCATCATGTATTCTTACTACGGCCTGTCTGCGGCTGGACCACAATTCCAAAAGTTCCTCTGGTGGAAGAAGTACATGACCGCCATCCAGCTGGTTCAGTTTGTGATGGTGTCCCTTCACGCCACCCAGTATTACTTCATGAATAGCTGTGACTACCAGGTCCCCCTGTTCATCCACCTCATCTGGATGTATGGCACCTTCTTCTTTGTGCTCTTCTCCAACTTCTGGTACCAGGCTTACGTAAAGGGCAAGAGGTTGCCCAAGCAGGATACCAAGCCCAGCCTCAATGGCAAGGCCAACGGGACCACCTTGGTCGCCAATGGCAAATACCATGAGAACAGTACCAGCAATGGCACCAGCAACAGTTCCAGTCACCACAAAAATGGCAGTGCCCATGCGGACAAGATGAAGAAGTCCTAAGATCTTCAGAAAAGAACACCCAAGACGCATGAATATGAGATCCCCGCACAAACTACCATGGATTCCAAAGAATGTTTTGGTTATGTTTATTTTCTGATCGTTAAGTTTTATTCCGCACAACAACCTGGGGAAATGACGTGGTCAATGATTTCCTCAGTTGGGGTCCCACATTAACAGTTTTTAAATTTAAACTGGGAAACTAACTATGGAACACAATGTATGAAGAGAAGACATGTTATTATGGCCTAATTTTATCTTCACTGATGTTGCCAATGAAGACAGTTCCCATGAAAGGTTacacactgtatgtacatgtgcACACAAACACTCCTACACCCACCACTCACCTGTCGCCACCCGATCATGTCCCTCTGACCCCCTGTGGACAGATGACACTGTACAGTTTCTATCATCAAACTTGAACACACCTTTGTAAATAGTTTTACTGTCAAAAACAACTAATGAAAATGGTATGCTTTAGAATTTTGTTACTTTATCTATGTTAAATGAAATACCAATAAATTACATTTTAAGTAACTGGTA

Function

NR:

description
elongation of very long chain fatty acids protein 1-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K10247 ELOVL1; elongation of very long chain fatty acids protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603376.2 False 1756 mRNA 0.48 9 54899096 54924751
XM_036977860.1 True 1857 mRNA 0.48 10 54899096 54924752

Neighbor

gene id symbol gene type direction distance location
slc44a5b LOC106613541 coding downstream 128810 54717326 ~ 54770286 (-)
erich3 erich3 coding downstream 237242 54640281 ~ 54661854 (-)
ssbp3b ssbp3 coding downstream 311906 54555051 ~ 54587190 (-)
LOC110524050 LOC106613535 coding downstream 355292 54378123 ~ 54543804 (-)
LOC110524048 NA coding downstream 571388 54326233 ~ 54327989 (-)
LOC118964528 NA coding upstream 72934 54997686 ~ 55005447 (-)
LOC110524068 LOC100286622 coding upstream 126972 55051724 ~ 55071938 (-)
LOC110524069 LOC106613551 coding upstream 147333 55072085 ~ 55073951 (-)
si:ch211-221n20.8 LOC106613553 coding upstream 178207 55102959 ~ 55122189 (-)
LOC110524071 LOC106613554 coding upstream 198865 55123617 ~ 55181458 (-)
G416481 NA non-coding downstream 10582 54887511 ~ 54888514 (-)
G416432 NA non-coding downstream 22404 54876456 ~ 54876692 (-)
G416427 LOC106613544 non-coding downstream 22758 54874002 ~ 54876338 (-)
G416428 NA non-coding downstream 28910 54869668 ~ 54870186 (-)
G416419 NA non-coding downstream 48414 54850233 ~ 54850682 (-)
G416521 NA non-coding upstream 12524 54937276 ~ 54938242 (-)
G416530 NA non-coding upstream 26755 54951507 ~ 54952438 (-)
G416544 NA non-coding upstream 38302 54963054 ~ 54963291 (-)
G416545 NA non-coding upstream 38738 54963490 ~ 54963703 (-)
G416673 NA non-coding upstream 55681 54980433 ~ 54981243 (-)
G416110 NA other downstream 512868 54363286 ~ 54392411 (-)
G415464 nexn other downstream 893423 54002448 ~ 54005673 (-)
G415420 NA other downstream 1006190 53890760 ~ 53892906 (-)
G415256 LOC106613513 other downstream 1280232 53617683 ~ 53618864 (-)
G412613 NA other downstream 3286534 51558378 ~ 51612562 (-)
G417527 NA other upstream 684083 55608835 ~ 55609730 (-)
LOC110522975 LOC106613586 other upstream 1784046 56703896 ~ 56711499 (-)
G418830 NA other upstream 1909274 56834026 ~ 56834595 (-)
G419603 NA other upstream 2686307 57611059 ~ 57611567 (-)

Expression


Co-expression Network