Item | Value |
---|---|
gene id | LOC118964529 |
gene name | NA |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 56211738 ~ 56214599 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005051586.1 | True | 1278 | mRNA | 0.43 | 3 | 56211738 | 56214599 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110524086 | LOC106613573 | coding | downstream | 75162 | 56105602 ~ 56136576 (-) |
nphs2 | LOC106613567 | coding | downstream | 336346 | 55871200 ~ 55875392 (-) |
LOC110524078 | nfia | coding | downstream | 485545 | 55546163 ~ 55726193 (-) |
LOC110522973 | patj | coding | downstream | 723771 | 55268446 ~ 55489840 (-) |
LOC118964623 | NA | coding | downstream | 961775 | 55248133 ~ 55250837 (-) |
LOC110524088 | LOC106613575 | coding | upstream | 26132 | 56240731 ~ 56383335 (-) |
LOC110524089 | LOC106613577 | coding | upstream | 241516 | 56456115 ~ 56459513 (-) |
LOC110524090 | LOC106613576 | coding | upstream | 246180 | 56460779 ~ 56485866 (-) |
LOC118964625 | NA | coding | upstream | 287240 | 56501839 ~ 56505438 (-) |
LOC118964624 | NA | coding | upstream | 295868 | 56510467 ~ 56546694 (-) |
G417771 | NA | non-coding | downstream | 90129 | 56041480 ~ 56121609 (-) |
G417755 | NA | non-coding | downstream | 204627 | 55999872 ~ 56007111 (-) |
G417650 | NA | non-coding | downstream | 290081 | 55836424 ~ 55921657 (-) |
G417609 | rab3b | non-coding | downstream | 363681 | 55793584 ~ 55848057 (-) |
G417615 | LOC106613563 | non-coding | downstream | 424524 | 55786961 ~ 55787214 (-) |
G418505 | NA | non-coding | upstream | 4146 | 56218745 ~ 56218980 (-) |
G418584 | NA | non-coding | upstream | 196474 | 56411073 ~ 56411429 (-) |
G418590 | NA | non-coding | upstream | 207739 | 56422338 ~ 56422619 (-) |
G418599 | NA | non-coding | upstream | 221392 | 56435991 ~ 56436467 (-) |
G418617 | NA | non-coding | upstream | 276149 | 56490748 ~ 56543373 (-) |
G417527 | NA | other | downstream | 602008 | 55608835 ~ 55609730 (-) |
LOC110524071 | LOC106613554 | other | downstream | 1051471 | 55123617 ~ 55181458 (-) |
G416110 | NA | other | downstream | 1825510 | 54363286 ~ 54392411 (-) |
G415464 | nexn | other | downstream | 2206065 | 54002448 ~ 54005673 (-) |
G415420 | NA | other | downstream | 2318832 | 53890760 ~ 53892906 (-) |
LOC110522975 | LOC106613586 | other | upstream | 494199 | 56703896 ~ 56711499 (-) |
G418830 | NA | other | upstream | 619427 | 56834026 ~ 56834595 (-) |
G419603 | NA | other | upstream | 1396460 | 57611059 ~ 57611567 (-) |
LOC110524128 | LOC107602773 | other | upstream | 1405455 | 57612040 ~ 57627128 (-) |
G419714 | NA | other | upstream | 1485146 | 57699745 ~ 57705936 (-) |