LOC110524090 (LOC106613576)


Basic Information

Item Value
gene id LOC110524090
gene name LOC106613576
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56460779 ~ 56485866 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603414.2
CTGTTCTCCCCAATCGTTGGGTTTTACTAGGCTAATCACATTTCGCTTCTCTGTTCTCCGCCATTTTGTAAGGGTATAAGAAAAGTCAGCCAGGCTACAGACTTGTTGGTCTAACTTGTGTAGCTAGTTCCGTGTTGTGCAATGGACGGCCGTCTAGAGACTGATTTGTATCCTATGGGATCTACTTACGTCACTGAACTAGACAGTGTCCACGATATTACAGTTGGTACAAAGAGAGGATCAGACGAGCTTTTCTCCTGCGTGGCAAACGGACCCTATATAATGACCAGCGCAGCAGCCAATGGCAACGACAGCAAGAAGTTCAAAGGTGACATAAGGGGCCCAGGAATCCCGTCGCGCGTCATCCACGTGCGCAAGCTCCCCAATGACATCAACGAGGCCGAGGTCATCTCCCTGGGCCTGCCCTTTGGCAAAGTCACCAACCTGCTCATGCTCAAGGGAAAAAACCAGGCCTTCATAGAGATGAACACAGAGGATGCAGCTCAGACCATGGTCAGCTACTACTCCTCGGTGACGCCGGTCATCCGCAACCACCCCATCTTCATGCAGTACTCCAACCACAAGGAGCTCAAGACGGACAACTCCCCCAACCAAGTGAGAGCCCAGGCGGCACTCCAGGCAGTGAACGCAGTCCAGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGTGGATGCCTCGGTGGGCATGGGCGGGCACAGCCCTGTGCTGCGCGTTATAGTGGAGAATCTGTTCTACCCAGTCACCCTGGACGTGCTGCACCAGATCTTCTCTAAGCTCGGCACAGTGCTGAAGATTATCACCTTTACCAAAAACAACCAGTTCCAGGCCCTGCTGCAGTACTCGGACGGTCTGACCGCTCAGCACGCTAAACTGTCTTTAGATGGGCAGAACATCTACAACGCCTGCTGCACCCTCCGCATCAACTTCTCCAAGCTGACCAGCCTGAATGTGAAGTACAACAACGACAAAAGCCGCGACTACACGCGGCCTGACCTGCCCACGGGAGACAGCCAGCCCTCCATTGACCACCAGGCCATGGCTGCAGCCTTCGGTGAGTACTATgGTGCTCCCGGGATCATCTCAGCCAACCCGTACGCAGGAGCTCATGCCTTCCCCCCGGCATTCGCCATTCAGCAAGCTACAGGCCTGACGATGCACAGTGTCCCTGGAGGCCTGGCTCAACTGACCATGCCTGTGGCTGCAGCCGCGGCGGCTGCAGGCAGAATGGGCTTCCACCAACTCTCCGGTGGCCACTGTGTCATGCTGGTCAGCAACCTCAACCCAGAGAGAGTTACACCCCAATGCCTCTTTATTCTTTTCGGTGTATATGGTGATGTGATGAGAGTGAAGATCCTGTTCAACAAGAAGGAGAACGCTCTGATCCAGATGTCTGATGGGACTCAGGCGCAGCTAGCAATGAGCCACCTGAATGGCCAGAGGCTCCACGGGAAAGCTTTGCGCGTCACcctgtccaaacacaccaatgtCCAGCTGCCCCGCGAGGGCCATGAGGACCAGGGCCTGACAAAGGACTACAGCAACTCACCCCTGCACCGCTTTAAGAAGCCTGGCTCCAAGAACTACTCTAACATATTCCCTCCCTCAGCCACCCTGCACCTCTCAAACATCCCTCCCTCTGTGGTTGAGGATGACCTCAAGATGCTGTTTGCGAGCTCCGGTGCAATGGTCAAGGCCTTCAAGTTCTTCCAgaAAGACCGCAAGATGGCCTTGGTCCAGATGAGCTCAGTTGAGGAGGCCATAGAGTCCCTCATCGAGTTCCACAATCACGACCTAGGTGAGAACCACCACCTGAGGGTCTCCTTCTCCAAATCTACCATCTGAGGGGTGCAGCCCAAAACACTACTGCTAATGGGCCGCTCACAATCCCTTCACGACCTCTGTCAAGTTGTGGGGAAGCGACTCTTCAGTCGTGAAGTAGCATCCAACACAGCAATCACTTCCATCATTCCTAGTATATTTATATACGCATATCTACATATGTCGACCTATAAACCATATGGAAAAGAAACGTGCACACCCGATTTTACTGGGTAAAAAAAGAAAAGTTTTATATTTCTAGCATCTTGCCTTTGCGAGATAAATGCATTCCTTGCTCTCTGCACCGACAGAAGTAGTTTACACTTGCCTGTCTAAGTCTGATTTAAGAGATTGGCGTAGCCTAAACTTCAGTCTTTTGGAAAATTCCATTTGCCCTTGGGTTCCAACACCACTAGGTTCTGAGGTACTTCTGTGACGCCTCATGTCCTCTTTGCCTTCAGATGTTTTCTGTGCCTTATTCCAGAAGTCTTATGTCCTTCAATTTGATACGTTGGCATTTTACAGCCAAAACAAAATTTAGCTTATCTTCCTCTCCCCAATCCTTGCTTGCGAAGACCAGGTTTACAGCTGATATGGGTTTACCATTTGTATAAAATGTATTACAAGGTggttcatccccccccccccccccccaatgtatTATGAAGGTTTTCTTTTTAGTCTTATTTTAAAATTAAGATGAGCTAGTTAGTTGAAGATTAAATCCACAACTCATTATCtaggttttttattttttaaatatgtaaaCCCCTTGTACCAGGGTTTGTGATTATTAGTCTTGTTTACTGTATGTCTAGATGTAGGTTTGCATTTTTTATGAAATTTATGCAATACGTTTTGTACAAATCCAGTATTGTACACATTGTTATTCCTATATACTGTTGGTTGTAGCTTATAGGTCTTGGTCAGTGGTTGCCTTAACGACTGTGCCTTAGCAAAAGGTCTTACTAGAAATTTCCTGATAAGTATGGCTTACAATGTCTTATGATTTTTGTCTTAATGGCTTGCCTCTCCTGATGCAGTGGCTGTCAATTTAGTATATTTATACCATTTTGTGATACACTACAGCGTAAAACCAAATAAGGCCTTTTTGCAAGTTATTTTAGCGAACCTGTATACACAGCTTTATTCATAATGCACTGCCACAGAGTTGTGGTAGTCTGCCTGCCCATTATAGCACATTTTACAAGGCTCTTACGGGGATCAGACAGAAGCGGACTATTGTGACTCTGCTGCTGTGAATTATAAAATAAACTTATGAATTGGAAGCGTCTCTCAGTTGCATGCCAAGATGAATGATGGTTATTTGATATTTACATGTGGGGTTAGTAACCTTTTATTGTACAGGGCTGTGACTACCTTAATGCAGTCATTGCTAACGGCAATACGGCACCCTCTTTCATGCAGTCTATGGACTGGACTTGTGGATCTGGACAACGTTCATCTTAAATTGAGATCCATTTTGCGTTTTTTGGAGAAGTGCCTTTCAAATTAAGCCTTTTTTGGTCTGTTTATACACATATGTTTACGTAATGAACGTATGTTCCTGCCTTAAGTGCCCTCAGGCTCATAGGATATGCACACATCTGGCATAAATGTAAAGGTCTGCAGTGATTCTGGGCGCTTGCTACCGTGAAGGTGGACACTTTGTTGTAGATCACATTTTAAAAGGTAATTATCAGTCTTAATACTTGGACATTCCACATGTGCATCATTTTATATTGGGCAAATGTTGAGGTTCTTTTCTCACAATTAATTGTGCATCAAGTTCCTAATTTTAAATTGGTGCAAAGCAATATAATTTCAGGGTCATGTGAGGAACCAGTGCTCAGACATTGTTCGATCACTAGTTTTCTTGAACACCAGTTTATTACATGCTAACCTATATTCATAATTGGACTCCAATGCAGAAGAATGACAATTTGTATGTAGATTACTCAAGAATATGCGACACTTGTCTCCATATCAATATGTAGCATGTATTGCTATTAAAGGTATTTTACTTGCTTTGCATACCCCAGGCCAGGAGTGGATTTCCCAATTATGCAAAATTGCACGGCACTTAACATTAAGATGGCAGGATTTCTTCAAGTGAGGTGATTGTCAGGGGGGGTGAAAAgcggtatttttttttttttttttttttttttttttgtagcacAAAGTAGGTATTATAAAACCTATCGTTTCAGATCTATGAAACATGTATACTTTGATTACAATTAGCTTGGGACCTTTTCTCTTGGGCCTCTCAGTAAAGAAAACAAACATCACAATTAAATAGttagaaaacaaacaaaaaaatgggtCCCTTTTGGTCATTAGTGTTCTGTGTAGCTTAAACTTTTCTTAATTGTGCCTTCAATAAATATTTTCACTGCTT
>XM_021603416.2
GCCATTTTGTAAGGGTATAAGAAAAGTCAGCCAGGCTACAGACTTGTTGGTCTAACTTGTGTAGCTAGTTCCGTGTTGTGCAATGGACGGCCGTCTAGAGACTGATTTGTATCCTATGGGATCTACTTACGTCACTGAACTAGAAGAGGATCAGACGAGCTTTTCTCCTGCGTGGCAAACGGACCCTATATAATGACCAGCGCAGCAGCCAATGGCAACGACAGCAAGAAGTTCAAAGGTGACATAAGGGGCCCAGGAATCCCGTCGCGCGTCATCCACGTGCGCAAGCTCCCCAATGACATCAACGAGGCCGAGGTCATCTCCCTGGGCCTGCCCTTTGGCAAAGTCACCAACCTGCTCATGCTCAAGGGAAAAAACCAGGCCTTCATAGAGATGAACACAGAGGATGCAGCTCAGACCATGGTCAGCTACTACTCCTCGGTGACGCCGGTCATCCGCAACCACCCCATCTTCATGCAGTACTCCAACCACAAGGAGCTCAAGACGGACAACTCCCCCAACCAAGTGAGAGCCCAGGCGGCACTCCAGGCAGTGAACGCAGTCCAGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGTGGATGCCTCGGTGGGCATGGGCGGGCACAGCCCTGTGCTGCGCGTTATAGTGGAGAATCTGTTCTACCCAGTCACCCTGGACGTGCTGCACCAGATCTTCTCTAAGCTCGGCACAGTGCTGAAGATTATCACCTTTACCAAAAACAACCAGTTCCAGGCCCTGCTGCAGTACTCGGACGGTCTGACCGCTCAGCACGCTAAACTGTCTTTAGATGGGCAGAACATCTACAACGCCTGCTGCACCCTCCGCATCAACTTCTCCAAGCTGACCAGCCTGAATGTGAAGTACAACAACGACAAAAGCCGCGACTACACGCGGCCTGACCTGCCCACGGGAGACAGCCAGCCCTCCATTGACCACCAGGCCATGGCTGCAGCCTTCGGTGAGTACTATgGTGCTCCCGGGATCATCTCAGCCAACCCGTACGCAGGAGCTCATGCCTTCCCCCCGGCATTCGCCATTCAGCAAGCTACAGGCCTGACGATGCACAGTGTCCCTGGAGGCCTGGCTCAACTGACCATGCCTGTGGCTGCAGCCGCGGCGGCTGCAGGCAGAATGGGCTTCCACCAACTCTCCGGTGGCCACTGTGTCATGCTGGTCAGCAACCTCAACCCAGAGAGAGTTACACCCCAATGCCTCTTTATTCTTTTCGGTGTATATGGTGATGTGATGAGAGTGAAGATCCTGTTCAACAAGAAGGAGAACGCTCTGATCCAGATGTCTGATGGGACTCAGGCGCAGCTAGCAATGAGCCACCTGAATGGCCAGAGGCTCCACGGGAAAGCTTTGCGCGTCACcctgtccaaacacaccaatgtCCAGCTGCCCCGCGAGGGCCATGAGGACCAGGGCCTGACAAAGGACTACAGCAACTCACCCCTGCACCGCTTTAAGAAGCCTGGCTCCAAGAACTACTCTAACATATTCCCTCCCTCAGCCACCCTGCACCTCTCAAACATCCCTCCCTCTGTGGTTGAGGATGACCTCAAGATGCTGTTTGCGAGCTCCGGTGCAATGGTCAAGGCCTTCAAGTTCTTCCAgaAAGACCGCAAGATGGCCTTGGTCCAGATGAGCTCAGTTGAGGAGGCCATAGAGTCCCTCATCGAGTTCCACAATCACGACCTAGGTGAGAACCACCACCTGAGGGTCTCCTTCTCCAAATCTACCATCTGAGGGGTGCAGCCCAAAACACTACTGCTAATGGGCCGCTCACAATCCCTTCACGACCTCTGTCAAGTTGTGGGGAAGCGACTCTTCAGTCGTGAAGTAGCATCCAACACAGCAATCACTTCCATCATTCCTAGTATATTTATATACGCATATCTACATATGTCGACCTATAAACCATATGGAAAAGAAACGTGCACACCCGATTTTACTGGGTAAAAAAAGAAAAGTTTTATATTTCTAGCATCTTGCCTTTGCGAGATAAATGCATTCCTTGCTCTCTGCACCGACAGAAGTAGTTTACACTTGCCTGTCTAAGTCTGATTTAAGAGATTGGCGTAGCCTAAACTTCAGTCTTTTGGAAAATTCCATTTGCCCTTGGGTTCCAACACCACTAGGTTCTGAGGTACTTCTGTGACGCCTCATGTCCTCTTTGCCTTCAGATGTTTTCT
>XM_021603417.2
CTAATCACATTTCGCTTCTCTGTTCTCCGCCATTTTGTAAGGGTATAAGAAAAGTCAGCCAGGCTACAGACTTGTTGGTCTAACTTGTGTAGCTAGTTCCGTGTTGTGCAATGGACGGAGAGGATCAGACGAGCTTTTCTCCTGCGTGGCAAACGGACCCTATATAATGACCAGCGCAGCAGCCAATGGCAACGACAGCAAGAAGTTCAAAGGTGACATAAGGGGCCCAGGAATCCCGTCGCGCGTCATCCACGTGCGCAAGCTCCCCAATGACATCAACGAGGCCGAGGTCATCTCCCTGGGCCTGCCCTTTGGCAAAGTCACCAACCTGCTCATGCTCAAGGGAAAAAACCAGGCCTTCATAGAGATGAACACAGAGGATGCAGCTCAGACCATGGTCAGCTACTACTCCTCGGTGACGCCGGTCATCCGCAACCACCCCATCTTCATGCAGTACTCCAACCACAAGGAGCTCAAGACGGACAACTCCCCCAACCAAGTGAGAGCCCAGGCGGCACTCCAGGCAGTGAACGCAGTCCAGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGTGGATGCCTCGGTGGGCATGGGCGGGCACAGCCCTGTGCTGCGCGTTATAGTGGAGAATCTGTTCTACCCAGTCACCCTGGACGTGCTGCACCAGATCTTCTCTAAGCTCGGCACAGTGCTGAAGATTATCACCTTTACCAAAAACAACCAGTTCCAGGCCCTGCTGCAGTACTCGGACGGTCTGACCGCTCAGCACGCTAAACTGTCTTTAGATGGGCAGAACATCTACAACGCCTGCTGCACCCTCCGCATCAACTTCTCCAAGCTGACCAGCCTGAATGTGAAGTACAACAACGACAAAAGCCGCGACTACACGCGGCCTGACCTGCCCACGGGAGACAGCCAGCCCTCCATTGACCACCAGGCCATGGCTGCAGCCTTCGGTGAGTACTATgGTGCTCCCGGGATCATCTCAGCCAACCCGTACGCAGGAGCTCATGCCTTCCCCCCGGCATTCGCCATTCAGCAAGCTACAGGCCTGACGATGCACAGTGTCCCTGGAGGCCTGGCTCAACTGACCATGCCTGTGGCTGCAGCCGCGGCGGCTGCAGGCAGAATGGGCTTCCACCAACTCTCCGGTGGCCACTGTGTCATGCTGGTCAGCAACCTCAACCCAGAGAGAGTTACACCCCAATGCCTCTTTATTCTTTTCGGTGTATATGGTGATGTGATGAGAGTGAAGATCCTGTTCAACAAGAAGGAGAACGCTCTGATCCAGATGTCTGATGGGACTCAGGCGCAGCTAGCAATGAGCCACCTGAATGGCCAGAGGCTCCACGGGAAAGCTTTGCGCGTCACcctgtccaaacacaccaatgtCCAGCTGCCCCGCGAGGGCCATGAGGACCAGGGCCTGACAAAGGACTACAGCAACTCACCCCTGCACCGCTTTAAGAAGCCTGGCTCCAAGAACTACTCTAACATATTCCCTCCCTCAGCCACCCTGCACCTCTCAAACATCCCTCCCTCTGTGGTTGAGGATGACCTCAAGATGCTGTTTGCGAGCTCCGGTGCAATGGTCAAGGCCTTCAAGTTCTTCCAgaAAGACCGCAAGATGGCCTTGGTCCAGATGAGCTCAGTTGAGGAGGCCATAGAGTCCCTCATCGAGTTCCACAATCACGACCTAGGTGAGAACCACCACCTGAGGGTCTCCTTCTCCAAATCTACCATCTGAGGGGTGCAGCCCAAAACACTACTGCTAATGGGCCGCTCACAATCCCTTCACGACCTCTGTCAAGTTGTGGGGAAGCGACTCTTCAGTCGTGAAGTAGCATCCAACACAGCAATCACTTCCATCATTCCTAGTATATTTATATACGCATATCTACATATGTCGACCTATAAACCATATGGAAAAGAAACGTGCACACCCGATTTTACTGGGTAAAAAAAGAAAAGTTTTATATTTCTAGCATCTTGCCTTTGCGAGATAAATGCATTCCTTGCTCTCTGCACCGACAGAAGTAGTTTACACTTGCCTGTCTAAGTCTGATTTAAGAGATTGGCGTAGCCTAAACTTCAGTCTTTTGGAAAATTCCATTTGCCCTTGGGTTCCAACACCACTAGGTTCTGAGGTACTTCTGTGACGCCTCATGTCCTCTTTGCCTTCAGATGTTTTCT
>XM_021603415.2
TGTTCTCCCCAATCGTTGGGTTTTACTAGGCTAATCACATTTCGCTTCTCTGTTCTCCGCCATTTTGTAAGGGTATAAGAAAAGTCAGCCAGGCTACAGACTTGTTGGTCTAACTTGTGTAGCTAGTTCCGTGTTGTGCAATGGACGGCCGTCTAGAGACTGATTTGTATCCTATGGGATCTACTTACGTCACTGAACTAGACAGTGTCCACGATATTACAGTTGGTACAAAGAGAGGATCAGACGAGCTTTTCTCCTGCGTGGCAAACGGACCCTATATAATGACCAGCGCAGCAGCCAATGGCAACGACAGCAAGAAGTTCAAAGGTGACATAAGGGGCCCAGGAATCCCGTCGCGCGTCATCCACGTGCGCAAGCTCCCCAATGACATCAACGAGGCCGAGGTCATCTCCCTGGGCCTGCCCTTTGGCAAAGTCACCAACCTGCTCATGCTCAAGGGAAAAAACCAGGCCTTCATAGAGATGAACACAGAGGATGCAGCTCAGACCATGGTCAGCTACTACTCCTCGGTGACGCCGGTCATCCGCAACCACCCCATCTTCATGCAGTACTCCAACCACAAGGAGCTCAAGACGGACAACTCCCCCAACCAAGTGAGAGCCCAGGCGGCACTCCAGGCAGTGAACGCAGTCCAGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGTGGATGCCTCGGTGGGCATGGGCGGGCACAGCCCTGTGCTGCGCGTTATAGTGGAGAATCTGTTCTACCCAGTCACCCTGGACGTGCTGCACCAGATCTTCTCTAAGCTCGGCACAGTGCTGAAGATTATCACCTTTACCAAAAACAACCAGTTCCAGGCCCTGCTGCAGTACTCGGACGGTCTGACCGCTCAGCACGCTAAACTGTCTTTAGATGGGCAGAACATCTACAACGCCTGCTGCACCCTCCGCATCAACTTCTCCAAGCTGACCAGCCTGAATGTGAAGTACAACAACGACAAAAGCCGCGACTACACGCGGCCTGACCTGCCCACGGGAGACAGCCAGCCCTCCATTGACCACCAGGCCATGGCTGCAGCCTTCGGTGCTCCCGGGATCATCTCAGCCAACCCGTACGCAGGAGCTCATGCCTTCCCCCCGGCATTCGCCATTCAGCAAGCTACAGGCCTGACGATGCACAGTGTCCCTGGAGGCCTGGCTCAACTGACCATGCCTGTGGCTGCAGCCGCGGCGGCTGCAGGCAGAATGGGCTTCCACCAACTCTCCGGTGGCCACTGTGTCATGCTGGTCAGCAACCTCAACCCAGAGAGAGTTACACCCCAATGCCTCTTTATTCTTTTCGGTGTATATGGTGATGTGATGAGAGTGAAGATCCTGTTCAACAAGAAGGAGAACGCTCTGATCCAGATGTCTGATGGGACTCAGGCGCAGCTAGCAATGAGCCACCTGAATGGCCAGAGGCTCCACGGGAAAGCTTTGCGCGTCACcctgtccaaacacaccaatgtCCAGCTGCCCCGCGAGGGCCATGAGGACCAGGGCCTGACAAAGGACTACAGCAACTCACCCCTGCACCGCTTTAAGAAGCCTGGCTCCAAGAACTACTCTAACATATTCCCTCCCTCAGCCACCCTGCACCTCTCAAACATCCCTCCCTCTGTGGTTGAGGATGACCTCAAGATGCTGTTTGCGAGCTCCGGTGCAATGGTCAAGGCCTTCAAGTTCTTCCAgaAAGACCGCAAGATGGCCTTGGTCCAGATGAGCTCAGTTGAGGAGGCCATAGAGTCCCTCATCGAGTTCCACAATCACGACCTAGGTGAGAACCACCACCTGAGGGTCTCCTTCTCCAAATCTACCATCTGAGGGGTGCAGCCCAAAACACTACTGCTAATGGGCCGCTCACAATCCCTTCACGACCTCTGTCAAGTTGTGGGGAAGCGACTCTTCAGTCGTGAAGTAGCATCCAACACAGCAATCACTTCCATCATTCCTAGTATATTTATATACGCATATCTACATATGTCGACCTATAAACCATATGGAAAAGAAACGTGCACACCCGATTTTACTGGGTAAAAAAAGAAAAGTTTTATATTTCTAGCATCTTGCCTTTGCGAGATAAATGCATTCCTTGCTCTCTGCACCGACAGAAGTAGTTTACACTTGCCTGTCTAAGTCTGATTTAAGAGATTGGCGTAGCCTAAACTTCAGTCTTTTGGAAAATTCCATTTGCCCTTGGGTTCCAACACCACTAGGTTCTGAGGTACTTCTGTGACGCCTCATGTCCTCTTTGCCTTCAGATGTTTTCT
>XM_036977909.1
CTGTTCTCCCCAATCGTTGGGTTTTACTAGGCTAATCACATTTCGCTTCTCTGTTCTCCGCCATTTTGTAAGGGTATAAGAAAAGTCAGCCAGGCTACAGACTTGTTGGTCTAACTTGTGTAGCTAGTTCCGTGTTGTGCAATGGACGGCCGTCTAGAGACTGATTTGTATCCTATGGGATCTACTTACGTCACTGAACTAGACAGTGTCCACGATATTACAGTTGGTACAAAGAGAGGATCAGACGAGCTTTTCTCCTGCGTGGCAAACGGACCCTATATAATGACCAGCGCAGCAGCCAATGGCAACGACAGCAAGAAGTTCAAAGGTGACATAAGGGGCCCAGGAATCCCGTCGCGCGTCATCCACGTGCGCAAGCTCCCCAATGACATCAACGAGGCCGAGGTCATCTCCCTGGGCCTGCCCTTTGGCAAAGTCACCAACCTGCTCATGCTCAAGGGAAAAAACCAGGCCTTCATAGAGATGAACACAGAGGATGCAGCTCAGACCATGGTCAGCTACTACTCCTCGGTGACGCCGGTCATCCGCAACCACCCCATCTTCATGCAGTACTCCAACCACAAGGAGCTCAAGACGGACAACTCCCCCAACCAAGTGAGAGCCCAGGCGGCACTCCAGGCAGTGAACGCAGTCCAGGCAGGGGGCATGCCCATGGCAGGGGGCATGCCCATGGCAGGGGTGGATGCCTCGGTGGGCATGGGCGGGCACAGCCCTGTGCTGCGCGTTATAGTGGAGAATCTGTTCTACCCAGTCACCCTGGACGTGCTGCACCAGATCTTCTCTAAGCTCGGCACAGTGCTGAAGATTATCACCTTTACCAAAAACAACCAGTTCCAGGCCCTGCTGCAGTACTCGGACGGTCTGACCGCTCAGCACGCTAAACTGTCTTTAGATGGGCAGAACATCTACAACGCCTGCTGCACCCTCCGCATCAACTTCTCCAAGCTGACCAGCCTGAATGTGAAGTACAACAACGACAAAAGCCGCGACTACACGCGGCCTGACCTGCCCACGGGAGACAGCCAGCCCTCCATTGACCACCAGGCCATGGCTGCAGCCTTCGGTGAGTACTATgGTGCTCCCGGGATCATCTCAGCCAACCCGTACGCAGGAGCTCATGCCTTCCCCCCGGCATTCGCCATTCAGCAAGCTACAGGCCTGACGATGCACAGTGTCCCTGGAGGCCTGGCTCAACTGACCATGCCTGTGGCTGCAGCCGCGGCGGCTGCAGGCAGAATGGGCTTCCACCAACTCTCCGGTGGCCACTGTGTCATGCTGGTCAGCAACCTCAACCCAGAGAGAGTTACACCCCAATGCCTCTTTATTCTTTTCGGTGTATATGGTGATGTGATGAGAGTGAAGATCCTGTTCAACAAGAAGGAGAACGCTCTGATCCAGATGTCTGATGGGACTCAGGCGCAGCTAGCAATGAGCCACCTGAATGGCCAGAGGCTCCACGGGAAAGCTTTGCGCGTCACcctgtccaaacacaccaatgtCCAGCTGCCCCGCGAGGGCCATGAGGACCAGGGCCTGACAAAGGACTACAGCAACTCACCCCTGCACCGCTTTAAGAAGCCTGGCTCCAAGAACTACTCTAACATATTCCCTCCCTCAGCCACCCTGCACCTCTCAAACATCCCTCCCTCTGTGGTTGAGGATGACCTCAAGATGCTGTTTGCGAGCTCCGGTGCAATGGTCAAGGCCTTCAAGTTCTTCCAgaAAGACCGCAAGATGGCCTTGGTCCAGATGAGCTCAGTTGAGGAGGCCATAGAGTCCCTCATCGAGTTCCACAATCACGACCTAGGTGAGAACCACCACCTGAGGGTCTCCTTCTCCAAATCTACCATCTGAGGGGTGCAGCCCAAAACACTACTGCTAATGGGCCGCTCACAATCCCTTCACGACCTCTGTCAAGTTGTGGGGAAGCGACTCTTCAGTCGTGAAGTAGCATCCAACACAGCAATCACTTCCATCATTCCTAGTATATTTATATACGCATATCTACATATGTCGACCTATAAACCATATGGAAAAGAAACGTGCACACCCGATTTTACTGGGTAAAAAAAGAAAAGTTTTATATTTCTAGCATCTTGCCTTTGCGAGATAAATGCATTCCTTGCTCTCTGCACCGACAGAAGTAGTTTACACTTGCCTGTCTAAGTCTGATTTAAGAGATTGGCGTAGCCTAAACTTCAGTCTTTTGGAAAATTCCATTTGCCCTTGGGTTCCAACACCACTAGGTTCTGAGGTACTTCTGTGACGCCTCATGTCCTCTTTGCCTTCAGATGTTTTCT
>XM_036977910.1
CTGTTCTCCCCAATCGTTGGGTTTTACTAGGCTAATCACATTTCGCTTCTCTGTTCTCCGCCATTTTGTAAGGGTATAAGAAAAGTCAGCCAGGCTACAGACTTGTTGGTCTAACTTGTGTAGCTAGTTCCGTGTTGTGCAATGGACGGCCGTCTAGAGACTGATTTGTATCCTATGGGATCTACTTACGTCACTGAACTAGACAGTGTCCACGATATTACAGTTGGTACAAAGAGAGGATCAGACGAGCTTTTCTCCTGCGTGGCAAACGGACCCTATATAATGACCAGCGCAGCAGCCAATGGCAACGACAGCAAGAAGTTCAAAGGTGACATAAGGGGCCCAGGAATCCCGTCGCGCGTCATCCACGTGCGCAAGCTCCCCAATGACATCAACGAGGCCGAGGTCATCTCCCTGGGCCTGCCCTTTGGCAAAGTCACCAACCTGCTCATGCTCAAGGGAAAAAACCAGGCCTTCATAGAGATGAACACAGAGGATGCAGCTCAGACCATGGTCAGCTACTACTCCTCGGTGACGCCGGTCATCCGCAACCACCCCATCTTCATGCAGTACTCCAACCACAAGGAGCTCAAGACGGACAACTCCCCCAACCAAGTGAGAGCCCAGGCGGCACTCCAGGCAGTGAACGCAGTCCAGGCAGGGGGCATGCCCATGGCAGGGGTGGATGCCTCGGTGGGCATGGGCGGGCACAGCCCTGTGCTGCGCGTTATAGTGGAGAATCTGTTCTACCCAGTCACCCTGGACGTGCTGCACCAGATCTTCTCTAAGCTCGGCACAGTGCTGAAGATTATCACCTTTACCAAAAACAACCAGTTCCAGGCCCTGCTGCAGTACTCGGACGGTCTGACCGCTCAGCACGCTAAACTGTCTTTAGATGGGCAGAACATCTACAACGCCTGCTGCACCCTCCGCATCAACTTCTCCAAGCTGACCAGCCTGAATGTGAAGTACAACAACGACAAAAGCCGCGACTACACGCGGCCTGACCTGCCCACGGGAGACAGCCAGCCCTCCATTGACCACCAGGCCATGGCTGCAGCCTTCGGTGAGTACTATgGTGCTCCCGGGATCATCTCAGCCAACCCGTACGCAGGAGCTCATGCCTTCCCCCCGGCATTCGCCATTCAGCAAGCTACAGGCCTGACGATGCACAGTGTCCCTGGAGGCCTGGCTCAACTGACCATGCCTGTGGCTGCAGCCGCGGCGGCTGCAGGCAGAATGGGCTTCCACCAACTCTCCGGTGGCCACTGTGTCATGCTGGTCAGCAACCTCAACCCAGAGAGAGTTACACCCCAATGCCTCTTTATTCTTTTCGGTGTATATGGTGATGTGATGAGAGTGAAGATCCTGTTCAACAAGAAGGAGAACGCTCTGATCCAGATGTCTGATGGGACTCAGGCGCAGCTAGCAATGAGCCACCTGAATGGCCAGAGGCTCCACGGGAAAGCTTTGCGCGTCACcctgtccaaacacaccaatgtCCAGCTGCCCCGCGAGGGCCATGAGGACCAGGGCCTGACAAAGGACTACAGCAACTCACCCCTGCACCGCTTTAAGAAGCCTGGCTCCAAGAACTACTCTAACATATTCCCTCCCTCAGCCACCCTGCACCTCTCAAACATCCCTCCCTCTGTGGTTGAGGATGACCTCAAGATGCTGTTTGCGAGCTCCGGTGCAATGGTCAAGGCCTTCAAGTTCTTCCAgaAAGACCGCAAGATGGCCTTGGTCCAGATGAGCTCAGTTGAGGAGGCCATAGAGTCCCTCATCGAGTTCCACAATCACGACCTAGGTGAGAACCACCACCTGAGGGTCTCCTTCTCCAAATCTACCATCTGAGGGGTGCAGCCCAAAACACTACTGCTAATGGGCCGCTCACAATCCCTTCACGACCTCTGTCAAGTTGTGGGGAAGCGACTCTTCAGTCGTGAAGTAGCATCCAACACAGCAATCACTTCCATCATTCCTAGTATATTTATATACGCATATCTACATATGTCGACCTATAAACCATATGGAAAAGAAACGTGCACACCCGATTTTACTGGGTAAAAAAAGAAAAGTTTTATATTTCTAGCATCTTGCCTTTGCGAGATAAATGCATTCCTTGCTCTCTGCACCGACAGAAGTAGTTTACACTTGCCTGTCTAAGTCTGATTTAAGAGATTGGCGTAGCCTAAACTTCAGTCTTTTGGAAAATTCCATTTGCCCTTGGGTTCCAACACCACTAGGTTCTGAGGTACTTCTGTGACGCCTCATGTCCTCTTTGCCTTCAGATGTTTTCT

Function

NR:

description
polypyrimidine tract-binding protein 1-like isoform X1

GO: NA

KEGG:

id description
K17844 PTBP3, ROD1; polypyrimidine tract-binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603414.2 False 4291 mRNA 0.46 16 56460779 56485866
XM_021603416.2 False 2267 mRNA 0.54 15 56462713 56485807
XM_021603417.2 False 2241 mRNA 0.54 14 56462713 56485835
XM_021603415.2 False 2344 mRNA 0.53 16 56462713 56485865
XM_036977909.1 False 2321 mRNA 0.53 17 56462713 56485866
XM_036977910.1 True 2303 mRNA 0.53 17 56462713 56485866

Neighbor

gene id symbol gene type direction distance location
LOC110524089 LOC106613577 coding downstream 1266 56456115 ~ 56459513 (-)
LOC110524088 LOC106613575 coding downstream 77444 56240731 ~ 56383335 (-)
LOC118964529 NA coding downstream 246180 56211738 ~ 56214599 (-)
LOC110524086 LOC106613573 coding downstream 324203 56105602 ~ 56136576 (-)
nphs2 LOC106613567 coding downstream 585387 55871200 ~ 55875392 (-)
LOC118964625 NA coding upstream 15973 56501839 ~ 56505438 (-)
LOC118964624 NA coding upstream 24601 56510467 ~ 56546694 (-)
LOC110524093 LOC106613579 coding upstream 92769 56578635 ~ 56580493 (-)
si:dkey-121a11.3 LOC106613582 coding upstream 117017 56602883 ~ 56630974 (-)
LOC110522975 LOC106613586 coding upstream 218030 56703896 ~ 56711499 (-)
G418599 NA non-coding downstream 24312 56435991 ~ 56436467 (-)
G418590 NA non-coding downstream 38160 56422338 ~ 56422619 (-)
G418584 NA non-coding downstream 49350 56411073 ~ 56411429 (-)
G418505 NA non-coding downstream 241799 56218745 ~ 56218980 (-)
G417771 NA non-coding downstream 339170 56041480 ~ 56121609 (-)
G418617 NA non-coding upstream 4882 56490748 ~ 56543373 (-)
G418622 LOC106613464 non-coding upstream 16675 56502541 ~ 56546662 (-)
G418679 LOC106613581 non-coding upstream 101316 56587182 ~ 56587655 (-)
G418671 NA non-coding upstream 103164 56589030 ~ 56593265 (-)
G418680 NA non-coding upstream 108082 56593948 ~ 56594224 (-)
G417527 NA other downstream 851049 55608835 ~ 55609730 (-)
LOC110524071 LOC106613554 other downstream 1300512 55123617 ~ 55181458 (-)
G416110 NA other downstream 2074551 54363286 ~ 54392411 (-)
G415464 nexn other downstream 2455106 54002448 ~ 54005673 (-)
G415420 NA other downstream 2567873 53890760 ~ 53892906 (-)
G418830 NA other upstream 348160 56834026 ~ 56834595 (-)
G419603 NA other upstream 1125193 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 1134188 57612040 ~ 57627128 (-)
G419714 NA other upstream 1213879 57699745 ~ 57705936 (-)

Expression


Co-expression Network