dph5 (LOC106613590)


Basic Information

Item Value
gene id dph5
gene name LOC106613590
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56779858 ~ 56788653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603443.2
ATCAAGAGTATTTTGCGTCAAGACGTATGTGAAATCGTATAGTGTTTACACGTGCGTTTAGTGACAAGTGGATTCAAGTTCCAAACTGTAGTAGCGGCGTATATTCACGAGGGAATCTGATAATAAATGCAAGCGTATTCTAGGTACCAGTTTAGATATGTTATGTCATAACTAACGGAACATTTTAAAACGGCCGCGGTCTGTTTTCTGCTAGGTTTAGCAATTAGCTAGCCTTAGCCAGCTATTAAGACAGTTGTGATGACGTGTGGTGTTAGCCACCAATATAGCTAACTCATAAAAAGTGTGGTATTTCTACGTTGCAATGCTGTACTTTATTGGGCTTGGGTTGGGAGATGCAAAGGACATCACCGTAAAGGGGTTAGAAATTGTAAAGCAATGCAGTCGTGTCTACTTGGAAGCCTACACGTCCATATTGACAGTTGGGAAAGATGCATTGGAGGAGTACTATGGACGGGAGCTGATACTGGCCGACAGAGACATGGTGGAACAGGAGGCTGATGAGATCCTGAAAGGGGCTGACGTCAGCGATGTGGCATTTCTTGTGGTGGGAGATCCATTTGGCGCCACCACCCACAGTGACTTGGTCCTGAGAGCAGTGAATGCTGGGATACAATACAGGGTCATCCATAACGCCTCTATCATGAACGCAGTTGGATGCTGCGGCCTCCAGCTGTACAACTTTGGAGAGACGGTGTCCATTGTGTTCTGGACAGATACGTGGAGACCGGAAAGCTTCTACGATAAAATCAAGAAGAACAGGGACCTGGGGATGCACACACTATGTTTGCTTGATATCAAAGTCAAAGAGCAGTCCATGGAGAACCTCATGAGGGGCCGTAAGATTTATGAACCGCCCAGGTTTATGACCGTGAGCCAGGCGGCTGAGCAGCTCCTGGAGATTGTACAAAACAGGAGGGAGCGGGGAGATGACCTGGCCATCAGCGAGGAGACCATATGTGTGGGTCTGGCCAGGGTGGGAGCAGAGGACCAGGTCATCCGCGCGGGGACACTCCGCCAACTGGCGTCATGTGACCTGGGCAGCCCGCTGCATTCCATGATCGTGACGGGTCACCTGCACCCGCTGGAGGTAGACATGTTGCGTTTGTCAGTTGCCACCCCCGACGCACTGCAGGACCTCCGAATGACCGACAGCTCAACGTACACCTCCTAATGCACACATACTGCCTCAAGAATGACTCTCAGGATCTCCAAACGACCTAGCACAAAGTTCCACACACGAACACAGGACCATGTGTCATATAGGCCTGCTAACTTCTGTTGACTTGACACGCCTAGCCGCTGACCGATACCAACACACCAGTAGAGTTATGTATTTAAACGTTCCATCCCAGGTAATCCAGTATTTCCCACCAGAACTGTCATTCTAAAGCATGAAAATGCAAGCCATACATTAAAGACAttgtatttaacattcagcaaa

Function

NR:

description
diphthine methyl ester synthase-like isoform X1

GO:

id name namespace
GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine biological_process
GO:0004164 diphthine synthase activity molecular_function

KEGG:

id description
K00586 DPH5; diphthine methyl ester synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603443.2 True 1462 mRNA 0.49 7 56779858 56788653

Neighbor

gene id symbol gene type direction distance location
serpinc1 LOC106613587 coding upstream 77702 56696618 ~ 56702156 (+)
rc3h1a LOC106613585 coding upstream 91269 56658921 ~ 56688589 (+)
stil stil coding upstream 132768 56631796 ~ 56647090 (+)
LOC110524094 LOC106613581 coding upstream 186577 56585208 ~ 56593281 (+)
LOC110524091 LOC106613578 coding upstream 254270 56505544 ~ 56525588 (+)
LOC100135807 LOC106613594 coding downstream 155190 56943838 ~ 56958165 (+)
LOC118964777 NA coding downstream 166671 56955324 ~ 56955462 (+)
LOC110524109 LOC106613599 coding downstream 227275 57015928 ~ 57037694 (+)
LOC118964761 NA coding downstream 237672 57026325 ~ 57026460 (+)
nwd1 nwd1 coding downstream 250464 57039117 ~ 57061390 (+)
G418087 NA non-coding upstream 112252 56633853 ~ 56667606 (+)
G418076 kiaa1614 non-coding upstream 163004 56614206 ~ 56616854 (+)
G418063 NA non-coding upstream 185492 56593978 ~ 56594366 (+)
G418007 LOC106613576 non-coding upstream 301292 56477763 ~ 56478566 (+)
G417989 NA non-coding upstream 306723 56471045 ~ 56473135 (+)
G418176 NA non-coding downstream 37486 56826139 ~ 56826512 (+)
G418178 NA non-coding downstream 39018 56827671 ~ 56827880 (+)
G418181 NA non-coding downstream 41069 56829722 ~ 56829961 (+)
G418183 NA non-coding downstream 44723 56833376 ~ 56833580 (+)
G418184 NA non-coding downstream 44984 56833637 ~ 56833862 (+)
G418119 LOC106613588 other upstream 50037 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 151241 56617890 ~ 56628617 (+)
G416857 NA other upstream 1454587 55324645 ~ 55325271 (+)
G415946 NA other upstream 2166716 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 2429243 54346481 ~ 54395448 (+)
G418251 rtca other downstream 135271 56923924 ~ 56925176 (+)
LOC110524119 LOC106613607 other downstream 576711 57352343 ~ 57367627 (+)
G419452 NA other downstream 1095727 57884380 ~ 57899648 (+)
G420117 LOC100846954 other downstream 1624470 58411240 ~ 58418268 (+)

Expression


Co-expression Network