nwd1 (nwd1)


Basic Information

Item Value
gene id nwd1
gene name nwd1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 57039117 ~ 57061390 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979052.1
GAACAAGGGGCAATTGGATTGGATGCTCAAATAATTATCTAAAAACTGTAACACAAGTACATGCTTACAGTCAGAATAGATAAGTCTGCTCACATGCTTCTCTGATGACTTTTGGAAGCTGAGCAATTATTGTGGGTCATTGTGAGATGAGAGGGAGGTTTTAGCCTGGGACAGTGCTAGGTGAGGAGGACCATGGCATCGCCAAGAGGAGCACTCATGGAGGTTCTCAAAGGCCAGGCGACTGAAGGACTGAAGCTCAGGTCCAACGTGGTCCGAGTCTTTGTCAGCTCCACATTTACAGATATGAGCAGTGAAAGAAATGCCTTATTGGACAAAACCTATCCTGAACTTCAAGCTTTTTGTCAGAGTCTGGGCTTAGTGTTTGAGGTTGTGGATATGAGATGGGGTCTCCAGGATGCAATTGCTGTGGACCACATGACCACAGAACTGTGTCTTCAGGAAATCGAGGCCTGCAGGAAAGTATCCGTAGGACCAAGTTTCATTGCTCTGCTGGGGAACCGGTATGGCCACCGCCCTATCCCCCGTGTCCTCCCAGGAAAACAATTTGAGGTGCTGCTGTCCAAGCTACCACAGGACCAGGTGGGGCTTCTCCACCAATGGTTCAGGAAAGACAACAATGCTGTTCCGCCTGTCTACGTTCTTCAGCCAATCACAACTCTGTTGCCCCACTACAATGACCTTCAGCCTGAGAGAAGGCCGCTACAGGATGACAGTGTCATTTCCTGGCGCTACACAGAGGCTCGATTATTGCAGCTCCTACGCACTGCGGCCGTGCAGGCTGAAAAAGACGGGGATATAACGGTTGAACAAAAACACCAGTTCTTCAAATCTGTGGCGGAGCATGAGATAGAGGAGGGTCTGCGAATTCCAGATGGGGACGAGAGCGAGCCCTCCGCCATCCTCTTCGTGCGGGAGCTACCTCACTTGCGTAAGAAGGACGGCCCGAAGCGGCTGGCCCAGTACATGGATGTGACGGCTGATGGCCTGCTGGATACCGAGGCTCAGGAACTCCTCTCGGGCCTCAAGTCGCGTCTCTTCGCTGCCTCGCCGGGCATGCTCAACCTGCACAGTGTGGAGTTGTGCAAGGGAGCCATCGAGCCCAGCTGCAAGGAGCATGCCCAGTACCTGGAGAGCCTCTGCGAGCAGCTCGTGTCCCAGACGAAGGCCCGCATTCGCAGGAGGGTTGGTGCTGGTtcgtcagtggaggctggtgaagtGAGGACGAATggggcaagaggaggagatgcaagTCAGAGGAAGGGGGAAGAGGACCGAGGTTGGCTGCTCCAGGAGCTTAGTCACCACATGGCTTTGAGTGCCGGGAAGTGTTCAGGCGTATTTCGCGGCAGGGAGGGACTCCTTGGGAAGATCTGTCTGGCCATGTGGGAGCACACCAACACCCGCCACACGCCCCTGGTGGTGCATGGGCCACCAGGTGTGGGAAAGACAACGCTGCTCTGCAAGCTGGCACAGGAGATGCGTGGCCTCCTGGACCCCAGGGCTGTGGTGGTGCTCAGGTTGCTGGGGACGTCGGCAGAGAGCTCCGACCTGGGCCGTGTCCTCCAGAGTGTCTGTTTCCAGATCTGCTCTGTGTTCAGTTTGTCACCTCCCACTCCAATAACAGCACACACGAGTGAGGACCTGGTGAGGTTTTTCCATGGCCTTCTAGCTGAGGTGTCGGAGCGAGGAGACACACTTCTTCTGATACTAGACTCCTTGGACCAATTGTCTTCAGCCACCCAGGGCCAGAAACTCCACTGGCTACCCAAAGACATCCCCCCCAATGTCCATTTGGTGGTGTCCACCGCAGATACAGGCTCTCCAGTTTTGGCTAACCTTCGGAGAACAGTCGAAGTACCGGGAAATTTCTTTGAAGTAGAACCCCTATCATGTGACCAGGGCAGAGAGATCATGAATGCCTACATGAGGGAAGTGCAACGAAGCCTGACTCCAGAACAGTGTGAAGTGGTACTGTGTAGCTTTCAGCTGAGTGGAAATCCTCTGCATCTGAAGCTACTGCTGGACATGGCCAGGCGATGGGCGTCCTATACACCCGTGACTGACCTGGCCCCGAGCAGTAGTgcacaggaagtgatgtcacagcTACTCCAGGCCCTTGAGGAGAGGCATGGGAAGCAACTGGTTGGCGCAGCTTTGGGATATATCGTTTCTGCTAGGGGTAGTCTATCAGAGGCAGAGCTGCGTGATATCTTGTCCCTTGATGACAATGTCCTGGCTGAAGTCTACCAGTACTGGCTTCCCCCCAACCACTCCCTCATCCGCCTCCCCCCTCTACTGTGGGTGCGCCTCAGGCACGACTTGGGAGAACTCCTCGTGGAGGGACAGGCCAATGGCGTCACGGTGCTCGACTTCCACCACAAGCTGTTGACTGAAACTGTGCGAGAGAGGTACCAGAGGTCAGAGCAGCAGGCTGACAGACACAGGGTCCTTGCTGAGTACTTCTTGGGTAGCTGGAGCCAAGGCCGATTCAAAGCTGTCCTCCTACCCCCACTGACGACCACATTGGACGCTGACCGCAAGGTGCCCCCTCAGCCTCTGTGGTTCGCTGAAGGAGTGGCAAATGTCAAAAAGCTGCAGGAGCTGCCCTACCACCTCCTCCACGCAGGCCTCTGGGAGGAGCTGCGCCAGGAGGTCATAGGCAGTAGTGAGTGGCTGTACTGTAAGACTCTGACCTGTGGAGTGGCCAGTGTCATTGAGGACCTGACCCTCTGCACCAAGCTCATGGACTGCCCCGAGACTCAACTGATCCGAGACACTTTCATTCTCCTCAAGCCCACCCTGGACTTTCTAGATGGCCAGATGGGTCAGATGGGTCAGGGGGGGTGGTATCGTAGACTCTCGTCCCTCTGGCTTGGAACCAGAAACATTGGCATTATACTTGGatgggtgggtggttgggtgaTACTGTATCAGGAGAGCCTTCTCTTCACACTGTCTCACCAACTATCTCACTCTGTTCTAATACTATGTTTCCTCTCCAAAGACCCCCCCCTCTTCTACACAGAGGTCTTGGCCAGGCTCCACTCCTTCGCTGAGATGTACCCTTCACTGATAGGACGACTCTGCTGCCAGTGTCACGACTGGCTCTCGTGCTGTCCCGACCCCATCCTTGTCCCCAAGTGCACCTTCCTCCAGCCTCCAGGGGGAGCGCTAAAGACGACGCTTGCTGGTTTCCAGAAAGGGGTCACAGCTCTGGATATTTGCCCAGAGAGAGGGATCCTGCTGGCAGGCTCAGAGGACGGGAAGGTGATTGCCTGGGACCTCAATGATCTAGAGGTCATCCAAACCTTAGTGGGACACACAGCTAAGGTGCTATCAGTGAGAGTGATTGACAGCGGCACTCACTGTCTCTCATTGGCTGCTGACGGGAGTCTGAGGAAGTGGAGCCTGCTGAGTGGCAGGCAGCTGTACTGTACCCAGGAGGCGGTGTCCATTAACTCCTTACCTTCCACCACACACATCCATGTGTCTGAGGAGAGGGCGCTTGTCTTCACTCACTCTGGAGGCCAGGGGAAAGTATGGCATCTTAACACAACAGAACTACTCTTCCAAGTCAAAGATACCGGTGTCTCCATTATTCTTGGATTTTTGAATGGAATGGTCGTCTCCCTCTCAGACGGAGGACTTGTCACATTTTCCCACCCATCTGCCGAGGACAAGACAGCGCAGATACATTTGGAAAAATCTTCACATAGTTTGACGCTGACGGCAACCCTTACACTGCAAAGAAATGGCCGACTACTTATAGCATCCAAGGAGGGCTTTCTCTATCAGGTTTCCAGCACGGTACAGGGCAGACAGTCACAGTGGACTCTGAGACAGACAGTCACAGAGCTTCCAGTCTGTGCAACCTTCCTCTCCGCCTCAGATGACGAAAGGATACTTTTGGCAGGCTGTGAGAGGACACTGGTCCTTTTCCATAGAGAGTCAGACTGTGTCCAGAGCTTCCTGGATCTGCACCACGAGGACACGGtgttgtgtgcctgtgtgtcaaGCGACAGCAGAGTGGTCATCTCGGGCTCTGAGGACCAGACTATACGGGTGTGGTCTATGACCACGGGAAACCTCCTTGACTGTTTCCTTGGCATGGATGCCCCTGTCACCACTCTGGCTCTGAATGAGGGCACTGTCGTCTCCGCCTCCTCCTCAGCCTACTACCTGAAGCTGTGGCATCTGCCCTCACCCAACAACCCTCAGCAGAGACCCAATTGCTGCATTCCAGCCGGGTGCCCTCAGGTTGCCCTCACTAAAGATGGCGACACGGTATACTATGTTAGAAACGTAGGCCAGAAAGAAGTGATTACATGGAATTGTCACACAGGCTCTTCCACTGACACCATGGCCGTCTCTGCTGAGGTGTGTTGCCTAGAGCTGGCCCAGAACAAGAAACTCCTCTTCTGTGGCCTCACGACTGGCACGGTCCTCATCTACCCCCTAGCCTTCCCCAAAGAGACCCTGTGCATCCCACCTCCTGAGACCCTGCCCACGGTGCGCTGCATGGCCATTGGCGGCCAGGAGAAGCACATGGCCGTGGCCTACGAGGACTCAGTGTGTCTGTTTGAGATCACGGCCAGGGACAGTTTCCCCAGCGTGGAGGGGCCCTCCGCGAGGTTTGCCCTCTCCCTGCTCCACTCGCCCGTCTCCTCCATGGCCCTGCTCCCAGACTGTAGGCTGCTGTACGGAACGGCCTGTGGGGAGGTCACCATGTACGACTTCAAGTCCGCCTCAACCGCCACCCTGGATGGCCACCGCAGCAGGGTCAACTGCGTGACGACCAGCAACTGGGGGACGCACGCCCTGGTGGGCTCAGAGGACGCCGTGCAGAGGCTGTGGGGGCTGACCCCCCTGGTGCTGGATCACACCATGGAGTACAAGGGGTTCTTGTTTGAAGGGGTTCTCTGTGCAGCGTTCTCTGGGAGTGACAAGCACGTCTTCACTGGCTCACAGGATAGAACTATTAAAGTCTGGGATGTTGCTAGTGGGAGTCTGTTATTCGTCCAGTATGTCTACGCTCCTGTCACCAAAATGTTGACCTACAGGAATGGCTTTGTGGCAATCTCTCAGCTGGGCTACGTCATCAAGGAAGGATTCCGCTGTCCGGATGGCGTCTGTCCGGAATATAACCCACTCCGGAACGTCAACGCACACTACAGGGTCACGTCCCGGCAGAAGAGTGCAGACAGCCCTCACAGCGTCATCACAGAGATCCCTGAGTACAATCCCGCTCAGTTTAACTTCATGGCCCTGATGCTCAAGAGCAAACCCTCTCACTCATGCCAACTGTTGTAAGGAAACTGACATAACATTACAGACATAGTGTCAATTGTAGAGATCTAGTGTCATATACGGTCCTAAGGTGTGCTGCTACTGTATACAGTAAGTTGACTTCAGTTTCCCACACTGAATTATATGAAAATAGGGGCTATGTCTGTCAGCTCAATTCACTTGCTTTAAATCAGCTATGCACATTACTTATTATAAAACATTCTGTGAAATGTAGGAATTTGTGTTAGCACATGTTCATCACATGACACGTAGAGATGACAAATATACAAACTGTTACAAAATGCCGTGATTATGTATAAAAGCATCAATATGCAGAACATTTAAGGGCTAGTTGCTGTACAAAGCAcacatgtacactgagtgtacaaaacattaggaacacctgctccttccatgacatagactgaccaggttaatccaggtgaaagctatgattccttattgatgtcacttgctaaatccacttGTCATGGAAATTACCACCAGGGACTCAGTCAAACATTAAATTACTCATTATTATCAGTaaactggagaggttccaaccaacttaATGCACAATAGTACACGTTGTTTGGGAGATCTGccggggcagtcccgttagttctcttatagttgtatttgcatgatttagcttattcataattaattaatcattaacgtttggttcatgcatgtgaccaaccaatacctcacaaggcttcttctcGCCAAGCTAAGACCTTGAAACCGAGATACCCTTTTCAGTTCTCAAAGCAATGTtctgggcatactgccaaattgctTATACTGATTGTGAGGATACCTCCCAGGCGCGATCAATCCGTCAAATTGGTTCTTAGAAAAGCACAAACCATAAACTGTTCCTTCACACACTtacatcagtgtagatgaaggggaggagagaggttatataaggatttttaagccttgagacaaggattgtgtatgtgtgccattgagggtgaatgggcaaaacaaaagattgtcttgcctttgaacggggtatggaagTAGGTGCCAAGCTCACTTGTGTGAGGGGATCAAGAACTGcaaagtttcctgtgtgtatcgagaatggtccaccacccaaaggacatccagccaacttgacacaactgtgggaagcattggcgtcaacatgggccattccctgtggaacgctttcgacaccttgtagagtccatgcctcgacaaattgaggctgttctgagggcaaaagggggtgtgtctcaatattaggaaggtgttcctaatgttttttacactctGTGTAGAAATGTTCATATTTTGTAGAATGCTAAAATaaaatattctgacatttcctGTTGTTGGAAATCATATATAAAATAGTTATTGTCTTTGCCTTCCGGCGCTCTCTTGAACAATCTTTTGACATTAAAGTACAGAGATTCACAGTGCGTACAGACTACTTCTGTTCAAAGTTGTTGCTAAACAACTCCAATGGACCAAGAGGAGGGCCCTCTCATTTATTATTGAAGTCCCAGGAAGCAGGGCACCAAACATTGCTGTCTAGTCTTTCTCTAGTGAAGGAAGTCTCTCTTCCACCATCTTGTTTTCCCCTCTGTTGGGCCTTTATACACGGCTTGCAAGAAAAAGACACAAAAACTTGGTACATGATGAGAAATAAGGTTGGGCATTCTACAAACATGCCGTACAATCACTCATATTTTCAAGTCCTTTTGAAAGCACCGTCTTTCTGTTTATTTAGAGAGCATTGCCTTTCTTTTTTTGTATAGACAATTTCCCCCCCCAAAATTAATCTTTAACATAACCAACATattacacaaaaaaaacacacacatgcaaaacaCAAATACATATTTAAATGATATGCTTTTTCATGGTCATGATTATTTCAAGTGTCCTTAAAGAAACACAAGACTCGTTCCCGAGTCTGTGTTATTTTTCTCCAGCCTCTTTGCTAACACGATCTCACGCAACGTTTTAATCAACATGTTCATCCACTCCGTGAACACTAGCTCTTTAGAGCTTTTCCAATGTCAAGCATTGCCTTCCTGTTCTCTGTGACTTGTGTAGCTTCCTATGGGCTTCTGCTTGTTCTCAACTGAACGTATATCTTGAAATGTGATTAAATATATTATTGG

Function

symbol description
nwd1 Orthologous to human NWD1 (NACHT and WD repeat domain containing 1).

NR:

description
NACHT domain- and WD repeat-containing protein 1

GO: NA

KEGG:

id description
K24734 NWD; NACHT domain- and WD repeat-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979052.1 True 7454 mRNA 0.51 20 57039117 57061390

Neighbor

gene id symbol gene type direction distance location
LOC110524109 LOC106613599 coding upstream 1423 57015928 ~ 57037694 (+)
LOC118964761 NA coding upstream 12657 57026325 ~ 57026460 (+)
LOC100135807 LOC106613594 coding upstream 82795 56943838 ~ 56958165 (+)
LOC118964777 NA coding upstream 83655 56955324 ~ 56955462 (+)
dph5 LOC106613590 coding upstream 250464 56779858 ~ 56788653 (+)
LOC110524113 LOC106613602 coding downstream 3522 57064912 ~ 57074729 (+)
c5h19orf25 cssa10h19orf25 coding downstream 15410 57076800 ~ 57078287 (+)
diras1a LOC106613605 coding downstream 54950 57116340 ~ 57133661 (+)
LOC110524118 NA coding downstream 139366 57200756 ~ 57264453 (+)
LOC110524119 LOC106613607 coding downstream 290953 57352343 ~ 57367627 (+)
G418295 LOC106613600 non-coding upstream 23946 57013617 ~ 57015171 (+)
G418297 NA non-coding upstream 28053 57010186 ~ 57011064 (+)
G418252 NA non-coding upstream 73697 56963994 ~ 56965420 (+)
G418265 NA non-coding upstream 96452 56942425 ~ 56942665 (+)
G418264 NA non-coding upstream 97158 56941754 ~ 56941959 (+)
G418379 NA non-coding downstream 81591 57142981 ~ 57143200 (+)
G418399 NA non-coding downstream 108845 57170235 ~ 57170470 (+)
G418428 NA non-coding downstream 166464 57227854 ~ 57231401 (+)
G419132 LOC106573930 non-coding downstream 288675 57350065 ~ 57350974 (+)
G419135 NA non-coding downstream 296599 57357989 ~ 57358207 (+)
G418251 rtca other upstream 113941 56923924 ~ 56925176 (+)
G418119 LOC106613588 other upstream 309296 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 410500 56617890 ~ 56628617 (+)
G416857 NA other upstream 1713846 55324645 ~ 55325271 (+)
G419452 NA other downstream 822990 57884380 ~ 57899648 (+)
G420117 LOC100846954 other downstream 1351733 58411240 ~ 58418268 (+)
G420634 NA other downstream 1881338 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 3632867 60694220 ~ 60695905 (+)

Expression


Co-expression Network