Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110524123 |
| gene name | LOC106613612 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 57460164 ~ 57537912 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| paralemmin-1-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036977940.1 | False | 6319 | mRNA | 0.46 | 10 | 57460164 | 57537912 |
| XM_036977941.1 | False | 6109 | mRNA | 0.45 | 8 | 57460164 | 57537912 |
| XM_036977942.1 | True | 6013 | mRNA | 0.45 | 7 | 57460164 | 57537912 |
57,420,000
57,430,000
57,440,000
57,450,000
57,460,000
57,470,000
57,480,000
57,490,000
57,500,000
57,500,000
57,510,000
57,520,000
57,530,000
57,540,000
57,550,000
57,560,000
57,570,000
57,580,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524122 | LOC106613611 | coding | downstream | 663 | 57444176 ~ 57459501 (-) |
| LOC110524120 | LOC106613608 | coding | downstream | 109164 | 57348970 ~ 57351000 (-) |
| apc2 | apc2 | coding | downstream | 345299 | 57078575 ~ 57114865 (-) |
| LOC110524110 | LOC106613600 | coding | downstream | 444224 | 57011622 ~ 57015940 (-) |
| LOC110524111 | LOC106613601 | coding | downstream | 448763 | 57007649 ~ 57011401 (-) |
| plppr3b | LOC106613613 | coding | upstream | 48973 | 57586885 ~ 57605528 (-) |
| LOC110524128 | LOC107602773 | coding | upstream | 74128 | 57612040 ~ 57627128 (-) |
| grin3bb | LOC106613616 | coding | upstream | 103308 | 57641220 ~ 57750792 (-) |
| wdr18 | LOC106613619 | coding | upstream | 233724 | 57771636 ~ 57862459 (-) |
| LOC110524131 | LOC106613618 | coding | upstream | 328650 | 57866562 ~ 57874864 (-) |
| G419526 | NA | non-coding | downstream | 80805 | 57379051 ~ 57379359 (-) |
| G419149 | NA | non-coding | downstream | 91437 | 57368490 ~ 57368727 (-) |
| G419147 | NA | non-coding | downstream | 97636 | 57362007 ~ 57362528 (-) |
| G419145 | LOC106613607 | non-coding | downstream | 99059 | 57360356 ~ 57361105 (-) |
| G419673 | LOC106613615 | non-coding | upstream | 100376 | 57638288 ~ 57641101 (-) |
| G419687 | NA | non-coding | upstream | 123413 | 57661325 ~ 57661537 (-) |
| G419702 | NA | non-coding | upstream | 145419 | 57683331 ~ 57683565 (-) |
| G419712 | NA | non-coding | upstream | 156027 | 57693939 ~ 57694248 (-) |
| G418830 | NA | other | downstream | 625569 | 56834026 ~ 56834595 (-) |
| LOC110522975 | LOC106613586 | other | downstream | 748780 | 56703896 ~ 56711499 (-) |
| G417527 | NA | other | downstream | 1850434 | 55608835 ~ 55609730 (-) |
| LOC110524071 | LOC106613554 | other | downstream | 2299897 | 55123617 ~ 55181458 (-) |
| G416110 | NA | other | downstream | 3073936 | 54363286 ~ 54392411 (-) |
| G419603 | NA | other | upstream | 73147 | 57611059 ~ 57611567 (-) |
| G419714 | NA | other | upstream | 161833 | 57699745 ~ 57705936 (-) |
| G420193 | NA | other | upstream | 574475 | 58112387 ~ 58114060 (-) |
| G420421 | NA | other | upstream | 875216 | 58413128 ~ 58414143 (-) |
