Item | Value |
---|---|
gene id | atp13a3 |
gene name | LOC106613657 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 59055120 ~ 59115105 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
probable cation-transporting ATPase 13A3 isoform X4 |
id | description |
---|---|
K14951 | ATP13A3_4_5; cation-transporting P-type ATPase 13A3/4/5 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021603568.2 | False | 5215 | mRNA | 0.54 | 32 | 59055120 | 59115105 |
XM_021603569.2 | False | 5212 | mRNA | 0.54 | 32 | 59055120 | 59115105 |
XM_036977976.1 | False | 5122 | mRNA | 0.53 | 31 | 59055120 | 59115105 |
XM_036977977.1 | True | 5119 | mRNA | 0.53 | 31 | 59055120 | 59115105 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
trnaa-ugc-13 | NA | coding | downstream | 28522 | 59026526 ~ 59026598 (-) |
LOC118964628 | NA | coding | downstream | 53540 | 58982688 ~ 59001580 (-) |
gamt | gamt | coding | downstream | 198673 | 58852019 ~ 58856447 (-) |
LOC110524167 | LOC106613995 | coding | downstream | 219009 | 58834262 ~ 58836111 (-) |
LOC110524158 | LOC106613645 | coding | downstream | 379192 | 58671471 ~ 58675928 (-) |
tmem44 | tmem44 | coding | upstream | 9976 | 59125081 ~ 59131011 (-) |
lsg1 | lsg1 | coding | upstream | 16047 | 59131152 ~ 59138429 (-) |
LOC110524182 | LOC106613664 | coding | upstream | 244781 | 59359886 ~ 59448197 (-) |
LOC110524184 | LOC106613666 | coding | upstream | 353675 | 59468780 ~ 59563676 (-) |
LOC118964629 | NA | coding | upstream | 493277 | 59608382 ~ 59612038 (-) |
G420981 | NA | non-coding | downstream | 1383 | 59047705 ~ 59053737 (-) |
G421034 | NA | non-coding | downstream | 9473 | 59045370 ~ 59045647 (-) |
G420992 | NA | non-coding | downstream | 105127 | 58949757 ~ 58949993 (-) |
G420968 | NA | non-coding | downstream | 147776 | 58907063 ~ 58907344 (-) |
G420964 | NA | non-coding | downstream | 152372 | 58899153 ~ 58902748 (-) |
G421077 | NA | non-coding | upstream | 5955 | 59121060 ~ 59121285 (-) |
G421079 | NA | non-coding | upstream | 6644 | 59121749 ~ 59122035 (-) |
G421137 | NA | non-coding | upstream | 51268 | 59166373 ~ 59166782 (-) |
G421138 | NA | non-coding | upstream | 51808 | 59166913 ~ 59169292 (-) |
G421141 | NA | non-coding | upstream | 57021 | 59172126 ~ 59172338 (-) |
G420982 | LOC106613655 | other | downstream | 18821 | 59026103 ~ 59036299 (-) |
G420421 | NA | other | downstream | 640977 | 58413128 ~ 58414143 (-) |
G420193 | NA | other | downstream | 941060 | 58112387 ~ 58114060 (-) |
G419714 | NA | other | downstream | 1349184 | 57699745 ~ 57705936 (-) |
LOC110524128 | LOC107602773 | other | downstream | 1428946 | 57612040 ~ 57627128 (-) |
G422347 | NA | other | upstream | 985660 | 60100765 ~ 60101056 (-) |
LOC110524239 | LOC106573579 | other | upstream | 1943889 | 61058949 ~ 61081864 (-) |
G424474 | NA | other | upstream | 2501765 | 61616870 ~ 61617244 (-) |
G424499 | LOC106613729 | other | upstream | 2534862 | 61649967 ~ 61651775 (-) |