tmem44 (tmem44)


Basic Information

Item Value
gene id tmem44
gene name tmem44
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59125081 ~ 59131011 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603572.2
GAATTGAAAAAGCACCCGTGAATAGGCTACCAGTGCAGCTTGTAAGCTTTCTTGACTTGGACATACATTTTTGCCAACACATAGCTAACCTTTCAGCGAAAACGTGTTTTGGAGTTACCTTTTGTAGTTAATAGGTTATTTTAGAGTTTACACTTACACGTCCAATTATAAATGTGGCTGCTGGTAAGCTTTTTTGATTTGGGCATAACGTAAATTTTTGCTAGGTAAAAAAAAGgtaaaaaaggttaaaaaaaaaaagactctTCAGAGAGTCTGTCGAAATTGGGCAACATAAATATGAATTGCTCATTTGctacgtgaggcttatttgatcgaatagaagtttcaTCATGGTTAGGTTGTTATAAATGCACTGATAAGTTGGCGCACGTGGCATTTTGGCAACTTACCCAGTAAACGACCAGTATACCGGAGTTGCGCCTGCTGTCATAGAgctagatagaggactcatcgtGAGTATTGCCACCATTTTAATGTACTTAACTGGGTGGGCATTCCTATATGAGTTGGGAGCATTCAGCAAATGAACAACCATTTACTTCTTTAAAATTgagatagcctcaatggcgctTTCACAGACTGTAatagcacagatacaaagatgaatcTTCTATTTATCTCTATGGTCTGTTCACACgggtatctgccctctcattggctagaatggtcccacctgatctcacctctcgcctgccttccatctttgaggacaggCATTTCCATTGTTTGAGCTGTCACTCGAATATCAATATAATAGACAATCTTTGCGATAGCTCACATTTTTTTCTCAAGAGAACTGCCTTTTATCTTTCAGTGTACAGCAAAAATGTGTCTGACTGTACCATTAGAAATGGTTTCCTTGGTTTGCAATTGATTTGCTTTGTTGCACATGACTGGTGTACGCAAAAAAGAAGCGAAGTACATTTTCATATTAATATAAATTAAATTGACCGAGTTTCTCATTACATCTACCTCCATTTGTTTAGTAAATGCATCAACATTCCCTGGCAAGATCATGCGTTTAAATTCGTATATTGAACCAGTGCCTCTATTGGGCAGCGCTTTTGTGAAGTAAATGTGCATGTGATCAGGGCACAATCGCGCACATCTTTTACATACCTGTGCTGTGCACCACCTGTCGCTCGCGCCACTGACGCAGCTGGTCATATTTGCCATTCCCTAGATTTGTTTTAGGTCAACGGCATAGTTAGAAGATATGGGAGTGGAAGCACAGAGTGTCACAAATGGACAAAGCAGAGCAGAAAGCCTTTCGTTTGACTTTACGTCTTGGTGGCGCCACGACATTATATCGACCTGTTTTTCAAACAGACAGAACGTTTGCATCTCGACCGGACTCGTCTGTTTGTCCGTGCTTCTTTTGATAATATCCTGTTTTATGCTGGTATGTCTGAGATGCAGAGGCCGGGACAGGAATTCCGGCAAGGAGGCAGCCTGTATCCTCTACTGTTTCTTTGGAAATTTGTGCAGCACCATCGGGGCATTTCTCTCCAATCAGCTGGCTCTTCAGGTCATAATGGGTGGTTTTATGGCAGCTGTAGAAGTTATTCATTTCATCTCCATCTTCCCGATATTTTTGCGTTGGAACACCAGAGCAGagAAGAGGCtgaggatgatgaagaggaggaggaggcagaactTCATGGCTGTGTCTCTGCTGTTGGTGGTGGGTGGAGGGAGCTACCTAACCTCCAGGACCAGCCATGGGCTTGTAGACAGACCTCTCACTGGGAGAAGACTTCTTCTCACTGACCTCCTGCATGACCATATGGAGGTCCTCGGTTACATTCTTGGTCTACTCTCTTTTGTGATTGCCTGGACCTCTAAGTTCCCTGACCTCTCCAGAGCACACAGAGGGGAGAGTTCAAGGGCACACGTGTCCTCTGGGTTGCTGTGCTCTTTGGCCGGTGCCCTCTACACCTCGGCCATATTACTTTACGACACCCAGTATGAGTTTGTACTGAGAGCCATGCCGTGGCTCCTGGCGTCAACGTGCTGTGCAGCCCTGGATCTTGCTATTGTGGTCCTGTCCTGGTGTAGGAAGGGTACCCCTGAGCTGCAGCCTGGGGGGGGTTCTCCAGATACAGAGAGTCTCCTGGGTGGCTCCTCTCCCCCCAGTCAGCACAACTCCAGTgggaagacaaaacaaaaacacccATTGGACTTGGATGGAGCTCCTCCCCGGGTTCTCTCCAGTAAGAAGAATCTAAAGTTTGCTGACATGGGGCATTACATGGATGTCAACATTCAACCCATGCGAAAGGTGTGTCTAAAGGAGGTGACTCTCTCTAGGGAGGAGGGGGTTTCAGAGAGCCTTCCCCTCAGGAGGACAGTGAGGGTAGTGAGAGTGGATGAACCCTGCACCTCCGAAACGTTCTCAGACTCCTCATCCCTCAACTCGGATCTGGAGTGGGATTTTGAAGACGCAAATGCACAGTGGAACAAACTGCTAAAAGAGAACGTGGATGGGTTTCCCCTGCAAGAATGGCCGAAGAACCCAAGCCCAAAACCCACCTGCAGCTGTGGTGGCATCATTTGACAGGCTGGGAAGCGGGTATAAAGCAGAGTGGGTGAAGTGGTGTGATAATTTCAAACACTGGTGAATGACCTGGTGACACTTCCTCATTACATCACATGGTCAGATCTGTGTTTTGGATTGTGAATATAAAGATAATAAAAGTACAAAAATTGATCTTCCATCAAA
>XM_021603573.2
GAATTGAAAAAGCACCCGTGAATAGGCTACCAGTGCAGCTTGTAAGCTTTCTTGACTTGGACATACATTTTTGCCAACACATAGCTAACCTTTCAGCGAAAACGTGTTTTGGAGTTACCTTTTGTAGTTAATAGGTTATTTTAGAGTTTACACTTACACGTCCAATTATAAATGTGGCTGCTGGTAAGCTTTTTTGATTTGGGCATAACGTAAATTTTTGCTAGGTAAAAAAAAGgtaaaaaaggttaaaaaaaaaaagactctTCAGAGAGTCTGTCGAAATTGGGCAACATAAATATGAATTGCTCATTTGctacgtgaggcttatttgatcgaatagaagtttcaTCATGGTTAGGTTGTTATAAATGCACTGATAAGTTGGCGCACGTGGCATTTTGGCAACTTACCCAGTAAACGACCAGTATACCGGAGTTGCGCCTGCTGTCATAGAgctagatagaggactcatcgtGAGTATTGCCACCATTTTAATGTACTTAACTGGGTGGGCATTCCTATATGAGTTGGGAGCATTCAGCAAATGAACAACCATTTACTTCTTTAAAATTgagatagcctcaatggcgctTTCACAGACTGTAatagcacagatacaaagatgaatcTTCTATTTATCTCTATGGTCTGTTCACACgggtatctgccctctcattggctagaatggtcccacctgatctcacctctcgcctgccttccatctttgaggacaggCATTTCCATTGTTTGAGCTGTCACTCGAATATCAATATAATAGACAATCTTTGCGATAGCTCACATTTTTTTCTCAAGAGAACTGCCTTTTATCTTTCAGTGTACAGCAAAAATGTGTCTGACTGTACCATTAGAAATGGTTTCCTTGGTTTGCAATTGATTTGCTTTGTTGCACATGACTGGTGTACGCAAAAAAGAAGCGAAGTACATTTTCATATTAATATAAATTAAATTGACCGAGTTTCTCATTACATCTACCTCCATTTGTTTAGTAAATGCATCAACATTCCCTGGCAAGATCATGCGTTTAAATTCGTATATTGAACCAGTGCCTCTATTGGGCAGCGCTTTTGTGAAGTAAATGTGCATGTGATCAGGGCACAATCGCGCACATCTTTTACATACCTGTGCTGTGCACCACCTGTCGCTCGCGCCACTGACGCAGCTGGTCATATTTGCCATTCCCTAGATTTGTTTTAGGTCAACGGCATAGTTAGAAGATATGGGAGTGGAAGCACAGAGTGTCACAAATGGACAAAGCAGAGCAGAAAGCCTTTCGTTTGACTTTACGTCTTGGTGGCGCCACGACATTATATCGACCTGTTTTTCAAACAGACAGAACGTTTGCATCTCGACCGGACTCGTCTGTTTGTCCGTGCTTCTTTTGATAATATCCTGTTTTATGCTGGTATGTCTGAGATGCAGAGGCCGGGACAGGAATTCCGGCAAGGAGGCAGCCTGTATCCTCTACTGTTTCTTTGGAAATTTGTGCAGCACCATCGGGGCATTTCTCTCCAATCAGCTGGCTCTTCAGGTCATAATGGGTGGTTTTATGGCAGCTGTAGAAGTTATTCATTTCATCTCCATCTTCCCGATATTTTTGCGTTGGAACACCAGAGCAGagAAGAGGCtgaggatgatgaagaggaggaggaggcagaactTCATGGCTGTGTCTCTGCTGTTGGTGGTGGGTGGAGGGAGCTACCTAACCTCCAGGACCAGCCATGGGCTTGTAGACAGACCTCTCACTGGGAGAAGACTTCTTCTCACTGACCTCCTGCATGACCATATGGAGGTCCTCGGTTACATTCTTGGTCTACTCTCTTTTGTGATTGCCTGGACCTCTAAGTTCCCTGACCTCTCCAGAGCACACAGAGGGGAGAGTTCAAGGGCACACGTGTCCTCTGGGTTGCTGTGCTCTTTGGCCGGTGCCCTCTACACCTCGGCCATATTACTTTACGACACCCAGTATGAGTTTGTACTGAGAGCCATGCCGTGGCTCCTGGCGTCAACGTGCTGTGCAGCCCTGGATCTTGCTATTGTGGTCCTGTCCTGGTGTAGGAAGGGTACCCCTGAGCTGCAGCCTGGGGGGGGTTCTCCAGATACAGAGAGTCTCCTGGGTGGCTCCTCTCCCCCCAGTCAGCACAACTCCAGTgggaagacaaaacaaaaacacccAGACTTGGATGGAGCTCCTCCCCGGGTTCTCTCCAGTAAGAAGAATCTAAAGTTTGCTGACATGGGGCATTACATGGATGTCAACATTCAACCCATGCGAAAGGTGTGTCTAAAGGAGGTGACTCTCTCTAGGGAGGAGGGGGTTTCAGAGAGCCTTCCCCTCAGGAGGACAGTGAGGGTAGTGAGAGTGGATGAACCCTGCACCTCCGAAACGTTCTCAGACTCCTCATCCCTCAACTCGGATCTGGAGTGGGATTTTGAAGACGCAAATGCACAGTGGAACAAACTGCTAAAAGAGAACGTGGATGGGTTTCCCCTGCAAGAATGGCCGAAGAACCCAAGCCCAAAACCCACCTGCAGCTGTGGTGGCATCATTTGACAGGCTGGGAAGCGGGTATAAAGCAGAGTGGGTGAAGTGGTGTGATAATTTCAAACACTGGTGAATGACCTGGTGACACTTCCTCATTACATCACATGGTCAGATCTGTGTTTTGGATTGTGAATATAAAGATAATAAAAGTACAAAAATTGATCTTCCATCAAA

Function

symbol description
tmem44 Predicted to enable L-lysine transmembrane transporter activity and arginine transmembrane transporter activity. Predicted to be located in membrane. Predicted to be active in lysosomal membrane. Predicted to be integral component of membrane. Orthologous to human TMEM44 (transmembrane protein 44).

NR:

description
transmembrane protein 44 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603572.2 False 2743 mRNA 0.45 10 59125081 59131011
XM_021603573.2 True 2740 mRNA 0.45 10 59125081 59131011

Neighbor

gene id symbol gene type direction distance location
atp13a3 LOC106613657 coding downstream 9976 59055120 ~ 59115105 (-)
trnaa-ugc-13 NA coding downstream 98483 59026526 ~ 59026598 (-)
LOC118964628 NA coding downstream 123501 58982688 ~ 59001580 (-)
gamt gamt coding downstream 268634 58852019 ~ 58856447 (-)
LOC110524167 LOC106613995 coding downstream 288970 58834262 ~ 58836111 (-)
lsg1 lsg1 coding upstream 141 59131152 ~ 59138429 (-)
LOC110524182 LOC106613664 coding upstream 228875 59359886 ~ 59448197 (-)
LOC110524184 LOC106613666 coding upstream 337769 59468780 ~ 59563676 (-)
LOC118964629 NA coding upstream 477371 59608382 ~ 59612038 (-)
LOC110524188 LOC106613669 coding upstream 534904 59665915 ~ 59709692 (-)
G421079 NA non-coding downstream 3046 59121749 ~ 59122035 (-)
G421077 NA non-coding downstream 3796 59121060 ~ 59121285 (-)
G420981 NA non-coding downstream 71344 59047705 ~ 59053737 (-)
G421034 NA non-coding downstream 79434 59045370 ~ 59045647 (-)
G420992 NA non-coding downstream 175088 58949757 ~ 58949993 (-)
G421137 NA non-coding upstream 35362 59166373 ~ 59166782 (-)
G421138 NA non-coding upstream 35902 59166913 ~ 59169292 (-)
G421141 NA non-coding upstream 41115 59172126 ~ 59172338 (-)
G421144 NA non-coding upstream 42603 59173614 ~ 59173934 (-)
G421935 NA non-coding upstream 219835 59350846 ~ 59352325 (-)
G420982 LOC106613655 other downstream 88782 59026103 ~ 59036299 (-)
G420421 NA other downstream 710938 58413128 ~ 58414143 (-)
G420193 NA other downstream 1011021 58112387 ~ 58114060 (-)
G419714 NA other downstream 1419145 57699745 ~ 57705936 (-)
LOC110524128 LOC107602773 other downstream 1498907 57612040 ~ 57627128 (-)
G422347 NA other upstream 969754 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 1927983 61058949 ~ 61081864 (-)
G424474 NA other upstream 2485859 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 2518956 61649967 ~ 61651775 (-)

Expression


Co-expression Network