Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110524183 |
| gene name | cgl |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 59456364 ~ 59463907 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cystathionine gamma-lyase-like |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0030170 | pyridoxal phosphate binding | molecular_function |
| GO:0016829 | lyase activity | molecular_function |
| id | description |
|---|---|
| K01758 | CTH; cystathionine gamma-lyase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036977979.1 | True | 2267 | mRNA | 0.48 | 12 | 59456364 | 59463907 |
59,449,000
59,450,000
59,451,000
59,452,000
59,453,000
59,454,000
59,455,000
59,456,000
59,457,000
59,458,000
59,459,000
59,460,000
59,461,000
59,462,000
59,463,000
59,464,000
59,465,000
59,466,000
59,467,000
59,468,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| srsf11 | LOC106613665 | coding | upstream | 97699 | 59350779 ~ 59358665 (+) |
| LOC110524179 | NA | coding | upstream | 287034 | 59167253 ~ 59169330 (+) |
| fam43a | fam43a | coding | upstream | 314912 | 59139437 ~ 59141452 (+) |
| LOC110524173 | LOC106613656 | coding | upstream | 406198 | 59038387 ~ 59050166 (+) |
| LOC110524172 | LOC106613655 | coding | upstream | 420061 | 59026005 ~ 59036303 (+) |
| LOC110524186 | LOC106613996 | coding | downstream | 127153 | 59591060 ~ 59595336 (+) |
| LOC110524187 | LOC106613668 | coding | downstream | 179876 | 59643783 ~ 59661241 (+) |
| LOC110524190 | LOC106613673 | coding | downstream | 250799 | 59714706 ~ 59734498 (+) |
| LOC110524191 | LOC106613674 | coding | downstream | 277309 | 59741216 ~ 59744639 (+) |
| LOC110524195 | LOC106613677 | coding | downstream | 338121 | 59802028 ~ 59821970 (+) |
| G421372 | NA | non-coding | upstream | 95364 | 59359916 ~ 59361000 (+) |
| G421376 | NA | non-coding | upstream | 96798 | 59359082 ~ 59359566 (+) |
| G421362 | NA | non-coding | upstream | 108833 | 59340051 ~ 59347531 (+) |
| G421188 | NA | non-coding | upstream | 218525 | 59233537 ~ 59237839 (+) |
| G421133 | NA | non-coding | upstream | 284985 | 59170033 ~ 59171379 (+) |
| G421517 | NA | non-coding | downstream | 200817 | 59664724 ~ 59665892 (+) |
| G421614 | LOC106613672 | non-coding | downstream | 246710 | 59710617 ~ 59712799 (+) |
| G421616 | NA | non-coding | downstream | 254118 | 59718025 ~ 59718250 (+) |
| G421627 | NA | non-coding | downstream | 275912 | 59739819 ~ 59740031 (+) |
| G420634 | NA | other | upstream | 512147 | 58942728 ~ 58944217 (+) |
| G420117 | LOC100846954 | other | upstream | 1039588 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 1556716 | 57884380 ~ 57899648 (+) |
| LOC110524119 | LOC106613607 | other | upstream | 2089027 | 57352343 ~ 57367627 (+) |
| LOC100135807 | LOC106613594 | other | upstream | 2498199 | 56943838 ~ 56958165 (+) |
| LOC110524226 | LOC106573564 | other | downstream | 1230350 | 60694220 ~ 60695905 (+) |
| G423922 | NA | other | downstream | 2257630 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 2641616 | 62105523 ~ 62105872 (+) |
| LOC110524265 | LOC106613745 | other | downstream | 2819245 | 62283054 ~ 62327772 (+) |
| G425224 | NA | other | downstream | 3581183 | 63045090 ~ 63051530 (+) |
