LOC110524192 (LOC106613675)


Basic Information

Item Value
gene id LOC110524192
gene name LOC106613675
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59745476 ~ 59754819 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603608.2
TCTgtaatccagggtttatatacatcacttCCTGCAAACCATTCAATATCAGTAGACCAAAATGGCCATCATCAATAACTTGCATTTTCTTGCTTTATTGTTTGTAACATTAACAGTTGCATCGGCTAGTGCCGATGACCAAACGAAAACGGTGGAATTCAACGTAAAACCCGGCGGAGAGGTGCATACGTTCTCCGAGAAAATGAGAGAATATGAATGTTCATTCACTTATGCATCACAAGGGGGAACCAATGAGCAATGGCTGATGAGTGTGGGCCTAAGCGATGATGACGGCCTGTTCTCCTGCTCAGTGTGGAGACCCCAGGGGAAGTCCTACCTGTTTTTCACTCAGTTCAAGGCAGAGCTGAAAGGAGCCAAGATTGAATATGCCAACGCATATTCCCAGACTGCAGCGGGAGGACAGAGGGATGTGACTTTGAGGGAAGATGAATTCACTGTGGGAGATTCTACAGTGACCCACAAAGACGGGAAGTTCCGCGCTGAACTCTCCAAACTGACCATTATTGCCCGGACACGACACGATGAGCTCTAATTGGCTGGAAATCTGAATGACTATTGTCCAATCGTGAGATCCTGGCAAGCTCTCAAGGCAGGCAATGTGCTCTACTGTCCATGACAGTGGCAAATGGATGGCATTTAAACAAAAGGACAGCCTATCAGCTTGGTGGTCTACAACTTTACTGttcaataaatatatttttgggggagtTTCTTTTAGGAATATGGCTTTACTGTTTGAGAATGTATGTGGGGATGTCTGATCTTGGCAGGTTTAGAAAGATGTAGTCTCAGCATAAGACTTAGAAATCCTCTAAGCCAGGGAAATGTGAGTAGTCTATTGTCTTCATCGTGCACACAATTATGGTTTTTCCAACCAGCTGCTTCTCTCTGGAAGTAAATGgttaacccagacagagtagagcaGGGAACCCAGATTCTGTGTTTTTGATCTGTATGGAGCACCTGATTCAACCAACCAATCGTCAGTCAATGCGGTTGATGACGTTTTACTCCTACCAACAGTCTTAATGAAGTTAGGTTGAGCTTTAGAACAGACACTAATTTGGCCCACCAGGATTAGAGATGTACTGTCTTGCCTTGATTTATGGGACGGTTAGCTAGCAGCACGTACCATATCCATCCAGGTTTATCCCTCTGTCCAGAGGAGGACCTTTGTGTTGATAGTGGAGTCCCCCTTCCTCGCCAGCGAGAGTCCCTGGGGTCCCAACAGGAAATGCCACAAGGCGCTGACAGGCATCGAGAGACAGaaagttacattttttaaaaatagtcTTTTCTACTCTGTGTTCTGATTCACAATGTGTAATGTATGCTCCAATAAAAGACATGTCTGGGAATGTGAAA

Function

NR:

description
myeloid-derived growth factor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603608.2 True 1386 mRNA 0.45 6 59745476 59754819

Neighbor

gene id symbol gene type direction distance location
cope LOC106613672 coding downstream 31375 59710615 ~ 59714101 (-)
LOC110524188 LOC106613669 coding downstream 35784 59665915 ~ 59709692 (-)
LOC118964629 NA coding downstream 133438 59608382 ~ 59612038 (-)
LOC110524184 LOC106613666 coding downstream 181800 59468780 ~ 59563676 (-)
LOC110524182 LOC106613664 coding downstream 297279 59359886 ~ 59448197 (-)
LOC110524193 LOC106613676 coding upstream 17942 59772761 ~ 59776656 (-)
LOC110524194 LOC106613679 coding upstream 32925 59787744 ~ 59801204 (-)
LOC118964630 NA coding upstream 150026 59904845 ~ 59914276 (-)
klf2a LOC106613686 coding upstream 224188 59979007 ~ 59981619 (-)
LOC110524206 ap1m1 coding upstream 361711 60116530 ~ 60134272 (-)
G422139 LOC106613674 non-coding downstream 3847 59741404 ~ 59741629 (-)
G422138 NA non-coding downstream 4928 59740282 ~ 59740548 (-)
G422125 LOC106613673 non-coding downstream 11017 59718709 ~ 59734459 (-)
G422089 NA non-coding downstream 79588 59664718 ~ 59665888 (-)
G422088 NA non-coding downstream 80866 59663321 ~ 59664610 (-)
G422155 NA non-coding upstream 6131 59760950 ~ 59761159 (-)
G422157 NA non-coding upstream 7354 59762173 ~ 59762438 (-)
G422191 NA non-coding upstream 68604 59823423 ~ 59823649 (-)
G422194 NA non-coding upstream 69886 59824705 ~ 59825043 (-)
G422200 NA non-coding upstream 87092 59841911 ~ 59842034 (-)
lsg1 lsg1 other downstream 607219 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 709177 59026103 ~ 59036299 (-)
G420421 NA other downstream 1331333 58413128 ~ 58414143 (-)
G420193 NA other downstream 1631416 58112387 ~ 58114060 (-)
G419714 NA other downstream 2039540 57699745 ~ 57705936 (-)
G422347 NA other upstream 345946 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 1304175 61058949 ~ 61081864 (-)
G424474 NA other upstream 1862051 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 1895148 61649967 ~ 61651775 (-)
G424502 NA other upstream 1904214 61659033 ~ 61659585 (-)

Expression


Co-expression Network