LOC110524193 (LOC106613676)


Basic Information

Item Value
gene id LOC110524193
gene name LOC106613676
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59772761 ~ 59776656 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603609.2
ataaaaatgaatatGCAAATCTTTGCGAAACCCCGAGGTTGATTGGTGTCGTTGGGTGTTCTGGGACAGTGATTGGTCACTGTAACAATGACACAAATCTGAGCTCACGTCTGCGTGACGCAAGTCACAGTTGTCTACAAATTGAGGGCTCGCGCCTCTTCATCAATGAAATAGTAAAGACAGCTGGGCTCTGCCACTATACTGGAGACAAAACACCGAAACTTGAGTTACTCCCTGCCTCGTATTAGTTGGATTGCATTTGTTATTGATTGTGAGTGTCACTTCAGCTGGGACTAGGAGCAGAAGTTTCAAAAACCGACTCAAAATGAAATACGTAATAGGAATTGGCGGTGTGACTAATGGTGGGAAAACCACTTTGACGAATAGGCTGATCAAGTCACTACCTAACTGTTGTGTGGTTCATCAAGATGACTTTTTCAAGAAACCTGACCAGATAGAAGTCGGGGAGGATGGCTTTAGACAGTGGGATGTGATCACAGCATTGGACATGGATGCCATGGTGAACACGATTCGAGGCTGGAGTGAGAACCCAGTGAAGTTTGCACACTCCCACGGTGTCAACGTGTCCCCTTCCACAGAGGTTGCCGACCCAGATCAGCAGatccacattctgattgtagAGGGCTTCCTTCTGTACAACTACAAACCCCTGATGGACGTGTATAACAAGTGCTACTACATCTCCATTCCATACGAAGAGTGCAAAAGGAGGAGAAGTACAAGACAATACACCGTCCCTGACCCCCCGGGTCTGTTTGAAGGCCATGTGTGGCCCATGTACTTGAAGCACAGGAATGAGATGGTTGAGAGCGGTTTAGACATCGCATATCTGGATGGCTTGAAATCAGAAGAAGGGATCTACAGCCAGGTGTATGAGGACATCCAGAATACACTGTTGAATCGTTTATAGCAGGAACTCCATCTCCAAACCTGTATAAACCTGTAAATAGCATCAAGActgaagattttttttaaaattgaagCATTTTTTCTTATTGTGTAAATTATATTGAAGGTATGTTAACTTATGTTTGACAGAATCATTTCTGTTTGTTTTCTTATCTAATCTGTTAGTCCATTGCTTGTGTTAATCAAACCACTGCCTAGTATCTGAGGGAGAGGGACAAACTGACCATCTGTCAATGAAAAtattttttgtatggaggtcaatgcgAATTGCCAAGTTTCTacatgaggcttatttgatcaaatagattCATGTTTACGTTTGTTACAAAGGAACTGATATGTGGATTCACATGGCATTTTGATAACTGAGGTACAAATAATTCTTTATTGGAGTTGTGCCTCTGCCCTCTCATGGTCTAGAAGGGTCCCACCTGAACTGGCCGCTTGCCTTCCATATTTGAGGAAATGTATTTCCTTTGTTAGAATAGAGCGGTCACTTGACTATTATGAATATATCACATCTTTGTTAGTCTGTACTTGGCTTTGTTTTGGCAAGTAAATTGTTTAAAATGTGTTCAGATTTCTCAATGTTACTCCTGTGTCCTGTCTTTATTTACAGTTCTGAACTTAATTGTGGTACATGGGGTATGAGTAaataaagtttacatacaccttaaccaaa
>XM_021603610.2
aataaaaatgaatatGCAAATCTTTGCGAAACCCCGAGGTTGATTGGTGTCGTTGGGTGTTCTGGGACAGTGATTGGTCACTGTAACAATGACACAAATCTGAGCTCACGTCTGCGTGACGCAAGTCACAGTTGTCTACAAATTGAGGGCTCGCGCCTCTTCATCAATGAAATAGTAAAGACAGCTGGGCTCTGCCACTATACTGGAGACAAAACACCGAAACTTGAGTTACTCCCTGCCTCGTATTAGTTGGATTGCATTTGTTATTGATTGTGAGTGTCACTTCAGCTGGGACTAGGAGCAGAAGTTTCAAAAACCGACTCAAAATGAAATACGTAATAGGAATTGGCGGTGTGACTAATGGTGGGAAAACCACTTTGACGAATAGGCTGATCAAGTCACTACCTAACTGTTGTGTGGTTCATCAAGATGACTTTTTCAAGAAACCTGACCAGATAGAAGTCGGGGAGGATGGCTTTAGACAGTGGGATGTGATCACAGCATTGGACATGGATGCCATGGTGAACACGATTCGAGGCTGGAGTGAGAACCCAGTGAAGTTTGCACACTCCCACGGTGTCAACGTGTCCCCTTCCACAGAGGTTGCCGACCCAGATCAGCAGatccacattctgattgtagAGGGCTTCCTTCTGTACAACTACAAACCCCTGATGGACGTGTATAACAAGTGCTACTACATCTCCATTCCATACGAAGAGTGCAAAAGGAGGAGAAGTACAAGACAATACACCGTCCCTGACCCCCCGGGTCTGTTTGAAGGCCATGTGTGGCCCATGTACTTGAAGCACAGGAATGAGATGGTTGAGAGCGGTTTAGACATCGCATATCTGGATGGCTTGAAATCAGAAGAAGGGATCTACAGCCAGGTGTATGAGGACATCCAGAATACACTGTTGAATCGTTTATAGGAACTCCATCTCCAAACCTGTATAAACCTGTAAATAGCATCAAGActgaagattttttttaaaattgaagCATTTTTTCTTATTGTGTAAATTATATTGAAGGTATGTTAACTTATGTTTGACAGAATCATTTCTGTTTGTTTTCTTATCTAATCTGTTAGTCCATTGCTTGTGTTAATCAAACCACTGCCTAGTATCTGAGGGAGAGGGACAAACTGACCATCTGTCAATGAAAAtattttttgtatggaggtcaatgcgAATTGCCAAGTTTCTacatgaggcttatttgatcaaatagattCATGTTTACGTTTGTTACAAAGGAACTGATATGTGGATTCACATGGCATTTTGATAACTGAGGTACAAATAATTCTTTATTGGAGTTGTGCCTCTGCCCTCTCATGGTCTAGAAGGGTCCCACCTGAACTGGCCGCTTGCCTTCCATATTTGAGGAAATGTATTTCCTTTGTTAGAATAGAGCGGTCACTTGACTATTATGAATATATCACATCTTTGTTAGTCTGTACTTGGCTTTGTTTTGGCAAGTAAATTGTTTAAAATGTGTTCAGATTTCTCAATGTTACTCCTGTGTCCTGTCTTTATTTACAGTTCTGAACTTAATTGTGGTACATGGGGTATGAGTAaataaagtttacatacaccttaaccaaa

Function

NR:

description
nicotinamide riboside kinase 2-like

GO:

id name namespace
GO:0019359 nicotinamide nucleotide biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0050262 ribosylnicotinamide kinase activity molecular_function

KEGG:

id description
K10524 NRK1_2; nicotinamide/nicotinate riboside kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603609.2 False 1612 mRNA 0.41 8 59772761 59776655
XM_021603610.2 True 1610 mRNA 0.41 8 59772761 59776656

Neighbor

gene id symbol gene type direction distance location
LOC110524192 LOC106613675 coding downstream 17942 59745476 ~ 59754819 (-)
cope LOC106613672 coding downstream 58660 59710615 ~ 59714101 (-)
LOC110524188 LOC106613669 coding downstream 63069 59665915 ~ 59709692 (-)
LOC118964629 NA coding downstream 160723 59608382 ~ 59612038 (-)
LOC110524184 LOC106613666 coding downstream 209085 59468780 ~ 59563676 (-)
LOC110524194 LOC106613679 coding upstream 11088 59787744 ~ 59801204 (-)
LOC118964630 NA coding upstream 128189 59904845 ~ 59914276 (-)
klf2a LOC106613686 coding upstream 202351 59979007 ~ 59981619 (-)
LOC110524206 ap1m1 coding upstream 339874 60116530 ~ 60134272 (-)
LOC110524209 LOC106613694 coding upstream 505718 60282374 ~ 60289431 (-)
G422157 NA non-coding downstream 10323 59762173 ~ 59762438 (-)
G422155 NA non-coding downstream 11602 59760950 ~ 59761159 (-)
G422139 LOC106613674 non-coding downstream 31132 59741404 ~ 59741629 (-)
G422138 NA non-coding downstream 32213 59740282 ~ 59740548 (-)
G422125 LOC106613673 non-coding downstream 38302 59718709 ~ 59734459 (-)
G422191 NA non-coding upstream 46767 59823423 ~ 59823649 (-)
G422194 NA non-coding upstream 48049 59824705 ~ 59825043 (-)
G422200 NA non-coding upstream 65255 59841911 ~ 59842034 (-)
G422205 NA non-coding upstream 67404 59844060 ~ 59844263 (-)
G422206 NA non-coding upstream 69335 59845991 ~ 59846213 (-)
lsg1 lsg1 other downstream 634504 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 736462 59026103 ~ 59036299 (-)
G420421 NA other downstream 1358618 58413128 ~ 58414143 (-)
G420193 NA other downstream 1658701 58112387 ~ 58114060 (-)
G419714 NA other downstream 2066825 57699745 ~ 57705936 (-)
G422347 NA other upstream 324109 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 1282338 61058949 ~ 61081864 (-)
G424474 NA other upstream 1840214 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 1873311 61649967 ~ 61651775 (-)
G424502 NA other upstream 1882377 61659033 ~ 61659585 (-)

Expression


Co-expression Network