LOC118964531


Basic Information

Item Value
gene id LOC118964531
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60223797 ~ 60267847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051588.1
GATCCAGTACAGCGGATCTCTTCCATCTATATTCTGAAGAACTTGAAGaTGAGAGGGGTTCCTCCTGCCACGGCTCTGTCATCCAGGGCCAGTTTGAGGGTTCCGTCCTTACAGCCAATATCATGTAGAGCCCATCCACAGATACACCAGCGACCCCTCACAACACCACTCAATCATCTACCATGAGGACAACATAGGGAGCTGGGGAGGGATTTGTTCAAGACACACGCTGCAGAACTACACCCAGTACCTCCCCCCTCAACATGTTAAGGTCACCCTGGCCCACGAGCTGTGCCACAGCCTGAGTGCCGCTGTGAGTACTGGACAATGTCATCCTTGCCTATTGTTATTGTTTTTCCCCATTGGTGTTCCAACACATACTTTTATTTGTTATATCACTGATATTTGATGTTTGATATATCATTATATGCCATTTGATTATATTACTTATTTTGTTGTACAGGTCTTGTTGCAGCTCTCTGTGTTAATTcattgtcacattctgaccttagttcctttgttttgtctttgttttagcatggtcggggcgtgagttggggtgggcagtctatgttcttttttctagaatttggg

Function

NR:

description
disintegrin and metalloproteinase domain-containing protein 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051588.1 True 594 mRNA 0.45 3 60223797 60267847

Neighbor

gene id symbol gene type direction distance location
LOC110524208 LOC106613692 coding upstream 43523 60165608 ~ 60180274 (+)
malt2 LOC106613687 coding upstream 61863 60133236 ~ 60161934 (+)
LOC110524202 NA coding upstream 254851 59930644 ~ 59968946 (+)
LOC110524200 LOC106613684 coding upstream 293254 59920588 ~ 59930543 (+)
LOC110524201 LOC106613685 coding upstream 303621 59915582 ~ 59920176 (+)
LOC110524211 tpm4 coding downstream 100544 60368391 ~ 60395175 (+)
LOC110524213 LOC106613698 coding downstream 131143 60398990 ~ 60407448 (+)
hsh2d LOC106613697 coding downstream 139706 60407553 ~ 60411038 (+)
LOC110524215 LOC106613700 coding downstream 159263 60427110 ~ 60432323 (+)
LOC110524216 LOC106613701 coding downstream 167916 60435763 ~ 60452642 (+)
G421862 NA non-coding upstream 13042 60210506 ~ 60210755 (+)
G421861 NA non-coding upstream 13584 60209935 ~ 60210213 (+)
G421846 NA non-coding upstream 27450 60196059 ~ 60196347 (+)
G421844 LOC105030512 non-coding upstream 29013 60194223 ~ 60194784 (+)
G421843 NA non-coding upstream 30041 60193356 ~ 60193756 (+)
G421867 NA non-coding downstream 29338 60297185 ~ 60298566 (+)
G422500 NA non-coding downstream 54810 60322657 ~ 60322919 (+)
G422514 NA non-coding downstream 63331 60331178 ~ 60418412 (+)
G422561 NA non-coding downstream 153584 60421431 ~ 60421644 (+)
G422562 NA non-coding downstream 154309 60422156 ~ 60422600 (+)
G420634 NA other upstream 1279580 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 1807021 58411240 ~ 58418268 (+)
G419452 NA other upstream 2324149 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 2856460 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3265632 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 426410 60694220 ~ 60695905 (+)
G423922 NA other downstream 1453690 61721537 ~ 61722024 (+)
G424079 NA other downstream 1837676 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 2015305 62283054 ~ 62327772 (+)
G425224 NA other downstream 2777243 63045090 ~ 63051530 (+)

Expression


Co-expression Network